Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0804 and DvMF_0805 are separated by 545 nucleotides DvMF_0805 and DvMF_0806 are separated by 262 nucleotides
DvMF_0804: DvMF_0804 - UspA domain protein (RefSeq), at 969,458 to 969,874
_0804
DvMF_0805: DvMF_0805 - protein of unknown function DUF6 transmembrane (RefSeq), at 970,420 to 971,280
_0805
DvMF_0806: DvMF_0806 - transcriptional regulator, AraC family (RefSeq), at 971,543 to 972,610
_0806
Position (kb) 970
971
972 Strain fitness (log2 ratio) -1
0
1 at 969.423 kb on + strand at 969.544 kb on + strand, within DvMF_0804 at 969.651 kb on + strand, within DvMF_0804 at 969.651 kb on + strand, within DvMF_0804 at 969.710 kb on - strand, within DvMF_0804 at 969.710 kb on - strand, within DvMF_0804 at 969.769 kb on + strand, within DvMF_0804 at 969.777 kb on - strand, within DvMF_0804 at 969.816 kb on + strand, within DvMF_0804 at 969.816 kb on + strand, within DvMF_0804 at 969.822 kb on + strand, within DvMF_0804 at 970.222 kb on - strand at 970.239 kb on + strand at 970.506 kb on - strand, within DvMF_0805 at 970.551 kb on - strand, within DvMF_0805 at 970.765 kb on - strand, within DvMF_0805 at 970.987 kb on + strand, within DvMF_0805 at 971.012 kb on + strand, within DvMF_0805 at 971.365 kb on + strand at 971.943 kb on - strand, within DvMF_0806 at 972.027 kb on + strand, within DvMF_0806 at 972.153 kb on - strand, within DvMF_0806
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 969,423 + -0.3 969,544 + DvMF_0804 0.21 -0.8 969,651 + DvMF_0804 0.46 -0.1 969,651 + DvMF_0804 0.46 +0.2 969,710 - DvMF_0804 0.60 -0.7 969,710 - DvMF_0804 0.60 -0.4 969,769 + DvMF_0804 0.75 -0.5 969,777 - DvMF_0804 0.76 -0.2 969,816 + DvMF_0804 0.86 -1.2 969,816 + DvMF_0804 0.86 -0.5 969,822 + DvMF_0804 0.87 -0.4 970,222 - -0.8 970,239 + -0.3 970,506 - DvMF_0805 0.10 -0.7 970,551 - DvMF_0805 0.15 -0.4 970,765 - DvMF_0805 0.40 -0.4 970,987 + DvMF_0805 0.66 -0.6 971,012 + DvMF_0805 0.69 -1.2 971,365 + -0.4 971,943 - DvMF_0806 0.37 -0.4 972,027 + DvMF_0806 0.45 -0.2 972,153 - DvMF_0806 0.57 -0.4
Or see this region's nucleotide sequence