Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0698 and DvMF_0699 are separated by 44 nucleotides DvMF_0699 and DvMF_0700 are separated by 708 nucleotides
DvMF_0698: DvMF_0698 - protein of unknown function DUF214 (RefSeq), at 845,118 to 846,248
_0698
DvMF_0699: DvMF_0699 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 846,293 to 847,762
_0699
DvMF_0700: DvMF_0700 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 848,471 to 849,817
_0700
Position (kb)
846
847
848 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 845.463 kb on + strand, within DvMF_0698 at 845.631 kb on - strand, within DvMF_0698 at 845.844 kb on + strand, within DvMF_0698 at 845.983 kb on - strand, within DvMF_0698 at 845.995 kb on + strand, within DvMF_0698 at 846.680 kb on - strand, within DvMF_0699 at 846.747 kb on + strand, within DvMF_0699 at 846.747 kb on + strand, within DvMF_0699 at 846.830 kb on - strand, within DvMF_0699 at 847.645 kb on + strand at 848.054 kb on - strand at 848.222 kb on - strand at 848.269 kb on + strand at 848.531 kb on - strand at 848.666 kb on + strand, within DvMF_0700 at 848.701 kb on - strand, within DvMF_0700 at 848.706 kb on - strand, within DvMF_0700
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 845,463 + DvMF_0698 0.31 -0.7 845,631 - DvMF_0698 0.45 -0.8 845,844 + DvMF_0698 0.64 -1.0 845,983 - DvMF_0698 0.76 +0.0 845,995 + DvMF_0698 0.78 -0.4 846,680 - DvMF_0699 0.26 -0.7 846,747 + DvMF_0699 0.31 -0.6 846,747 + DvMF_0699 0.31 -4.0 846,830 - DvMF_0699 0.37 -0.3 847,645 + +0.3 848,054 - -0.1 848,222 - -1.1 848,269 + -0.8 848,531 - -0.5 848,666 + DvMF_0700 0.14 -0.1 848,701 - DvMF_0700 0.17 -0.4 848,706 - DvMF_0700 0.17 -0.4
Or see this region's nucleotide sequence