Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0657 and DvMF_0658 overlap by 4 nucleotides DvMF_0658 and DvMF_0659 are separated by 72 nucleotides DvMF_0659 and DvMF_0660 are separated by 732 nucleotides
DvMF_0657: DvMF_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 792,406 to 793,299
_0657
DvMF_0658: DvMF_0658 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 793,296 to 794,129
_0658
DvMF_0659: DvMF_0659 - hypothetical protein (RefSeq), at 794,202 to 795,071
_0659
DvMF_0660: DvMF_0660 - Patatin (RefSeq), at 795,804 to 796,769
_0660
Position (kb) 794
795
796 Strain fitness (log2 ratio) -1
0
1 at 793.226 kb on - strand at 793.391 kb on + strand, within DvMF_0658 at 793.470 kb on - strand, within DvMF_0658 at 793.991 kb on + strand, within DvMF_0658 at 794.389 kb on - strand, within DvMF_0659 at 794.520 kb on + strand, within DvMF_0659 at 794.912 kb on + strand, within DvMF_0659 at 794.968 kb on - strand, within DvMF_0659 at 795.120 kb on + strand at 795.964 kb on - strand, within DvMF_0660
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 793,226 - -0.1 793,391 + DvMF_0658 0.11 -0.3 793,470 - DvMF_0658 0.21 -0.2 793,991 + DvMF_0658 0.83 -0.1 794,389 - DvMF_0659 0.21 -0.5 794,520 + DvMF_0659 0.37 -0.6 794,912 + DvMF_0659 0.82 -0.1 794,968 - DvMF_0659 0.88 -0.1 795,120 + -0.5 795,964 - DvMF_0660 0.17 -0.4
Or see this region's nucleotide sequence