Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0468 and DvMF_0469 are separated by 194 nucleotides DvMF_0469 and DvMF_0470 are separated by 371 nucleotides
DvMF_0468: DvMF_0468 - response regulator receiver protein (RefSeq), at 547,978 to 548,340
_0468
DvMF_0469: DvMF_0469 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,535 to 550,361
_0469
DvMF_0470: DvMF_0470 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 550,733 to 552,838
_0470
Position (kb) 548
549
550
551 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 547.655 kb on - strand at 547.825 kb on - strand at 547.846 kb on - strand at 547.851 kb on - strand at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.162 kb on - strand, within DvMF_0468 at 548.246 kb on + strand, within DvMF_0468 at 548.265 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.304 kb on + strand at 548.343 kb on + strand at 548.401 kb on + strand at 548.401 kb on + strand at 548.470 kb on - strand at 548.812 kb on + strand, within DvMF_0469 at 548.844 kb on + strand, within DvMF_0469 at 548.852 kb on - strand, within DvMF_0469 at 548.979 kb on - strand, within DvMF_0469 at 549.365 kb on + strand, within DvMF_0469 at 549.368 kb on - strand, within DvMF_0469 at 549.480 kb on - strand, within DvMF_0469 at 549.582 kb on - strand, within DvMF_0469 at 549.666 kb on - strand, within DvMF_0469 at 549.782 kb on + strand, within DvMF_0469 at 549.859 kb on + strand, within DvMF_0469 at 549.859 kb on + strand, within DvMF_0469 at 549.867 kb on - strand, within DvMF_0469 at 550.533 kb on - strand at 550.788 kb on - strand at 550.940 kb on - strand at 550.946 kb on - strand, within DvMF_0470 at 551.165 kb on - strand, within DvMF_0470 at 551.280 kb on - strand, within DvMF_0470
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 547,655 - -1.6 547,825 - +0.5 547,846 - -0.6 547,851 - -0.6 548,154 + DvMF_0468 0.48 -4.7 548,154 + DvMF_0468 0.48 -3.9 548,154 + DvMF_0468 0.48 -3.3 548,162 - DvMF_0468 0.51 -3.6 548,246 + DvMF_0468 0.74 -0.4 548,265 - DvMF_0468 0.79 -1.4 548,285 - DvMF_0468 0.85 -4.7 548,285 - DvMF_0468 0.85 -5.9 548,304 + -3.3 548,343 + -0.6 548,401 + -0.6 548,401 + -0.3 548,470 - +0.2 548,812 + DvMF_0469 0.15 -2.1 548,844 + DvMF_0469 0.17 -1.2 548,852 - DvMF_0469 0.17 -0.8 548,979 - DvMF_0469 0.24 -0.9 549,365 + DvMF_0469 0.45 -1.6 549,368 - DvMF_0469 0.46 -1.0 549,480 - DvMF_0469 0.52 -0.8 549,582 - DvMF_0469 0.57 -0.8 549,666 - DvMF_0469 0.62 -0.9 549,782 + DvMF_0469 0.68 -2.0 549,859 + DvMF_0469 0.72 -1.3 549,859 + DvMF_0469 0.72 -1.3 549,867 - DvMF_0469 0.73 -0.9 550,533 - -0.3 550,788 - -0.5 550,940 - -0.4 550,946 - DvMF_0470 0.10 -0.5 551,165 - DvMF_0470 0.21 -0.3 551,280 - DvMF_0470 0.26 -0.3
Or see this region's nucleotide sequence