Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0303 and DvMF_0304 are separated by 73 nucleotides DvMF_0304 and DvMF_0305 are separated by 267 nucleotides DvMF_0305 and DvMF_0306 are separated by 464 nucleotides
DvMF_0303: DvMF_0303 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 348,603 to 350,378
_0303
DvMF_0304: DvMF_0304 - putative cache sensor protein (RefSeq), at 350,452 to 350,910
_0304
DvMF_0305: DvMF_0305 - split soret cytochrome c precursor (RefSeq), at 351,178 to 352,026
_0305
DvMF_0306: DvMF_0306 - acetylglutamate kinase (RefSeq), at 352,491 to 353,453
_0306
Position (kb) 351
352
353 Strain fitness (log2 ratio) -8
-7
-6
-5
-4
-3
-2
-1
0
1 at 350.380 kb on + strand at 350.449 kb on - strand at 350.734 kb on - strand, within DvMF_0304 at 350.788 kb on + strand, within DvMF_0304 at 350.862 kb on + strand, within DvMF_0304 at 351.134 kb on + strand at 351.164 kb on + strand at 351.233 kb on + strand at 351.288 kb on + strand, within DvMF_0305 at 351.518 kb on + strand, within DvMF_0305 at 351.545 kb on - strand, within DvMF_0305 at 351.619 kb on - strand, within DvMF_0305 at 351.629 kb on - strand, within DvMF_0305 at 351.771 kb on + strand, within DvMF_0305 at 351.785 kb on + strand, within DvMF_0305 at 351.822 kb on - strand, within DvMF_0305 at 351.874 kb on + strand, within DvMF_0305 at 351.986 kb on + strand at 352.162 kb on - strand at 352.651 kb on - strand, within DvMF_0306 at 352.742 kb on + strand, within DvMF_0306 at 352.776 kb on - strand, within DvMF_0306 at 352.930 kb on - strand, within DvMF_0306
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 350,380 + -0.4 350,449 - +1.1 350,734 - DvMF_0304 0.61 -0.7 350,788 + DvMF_0304 0.73 +0.1 350,862 + DvMF_0304 0.89 -0.7 351,134 + -0.3 351,164 + +0.0 351,233 + -0.4 351,288 + DvMF_0305 0.13 +0.1 351,518 + DvMF_0305 0.40 -0.8 351,545 - DvMF_0305 0.43 -1.0 351,619 - DvMF_0305 0.52 -2.0 351,629 - DvMF_0305 0.53 -0.8 351,771 + DvMF_0305 0.70 -0.8 351,785 + DvMF_0305 0.71 -0.4 351,822 - DvMF_0305 0.76 -0.3 351,874 + DvMF_0305 0.82 -0.6 351,986 + +0.1 352,162 - -0.3 352,651 - DvMF_0306 0.17 -7.5 352,742 + DvMF_0306 0.26 -5.3 352,776 - DvMF_0306 0.30 -6.5 352,930 - DvMF_0306 0.46 -7.9
Or see this region's nucleotide sequence