Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0248 and DvMF_0249 are separated by 533 nucleotides DvMF_0249 and DvMF_0250 are separated by 52 nucleotides
DvMF_0248: DvMF_0248 - flagellar hook-length control protein (RefSeq), at 281,211 to 283,106
_0248
DvMF_0249: DvMF_0249 - glycosyl transferase family 9 (RefSeq), at 283,640 to 285,205
_0249
DvMF_0250: DvMF_0250 - CgeB family protein (RefSeq), at 285,258 to 287,207
_0250
Position (kb) 283
284
285
286 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 283.048 kb on - strand at 283.116 kb on + strand at 283.291 kb on - strand at 283.365 kb on + strand at 283.479 kb on - strand at 283.609 kb on - strand at 283.626 kb on - strand at 283.681 kb on - strand at 283.758 kb on + strand at 284.328 kb on + strand, within DvMF_0249 at 284.328 kb on + strand, within DvMF_0249 at 284.338 kb on + strand, within DvMF_0249 at 284.425 kb on - strand, within DvMF_0249 at 284.512 kb on + strand, within DvMF_0249 at 284.574 kb on + strand, within DvMF_0249 at 284.634 kb on - strand, within DvMF_0249 at 284.690 kb on + strand, within DvMF_0249 at 285.200 kb on + strand at 285.200 kb on + strand at 285.328 kb on - strand at 285.592 kb on + strand, within DvMF_0250 at 285.722 kb on - strand, within DvMF_0250 at 285.897 kb on - strand, within DvMF_0250 at 285.988 kb on + strand, within DvMF_0250 at 286.102 kb on - strand, within DvMF_0250
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 283,048 - -2.8 283,116 + -2.3 283,291 - -1.4 283,365 + -0.4 283,479 - +0.1 283,609 - +0.0 283,626 - -0.2 283,681 - -3.3 283,758 + -3.0 284,328 + DvMF_0249 0.44 -2.1 284,328 + DvMF_0249 0.44 -3.0 284,338 + DvMF_0249 0.45 -2.8 284,425 - DvMF_0249 0.50 -3.0 284,512 + DvMF_0249 0.56 -2.9 284,574 + DvMF_0249 0.60 -2.6 284,634 - DvMF_0249 0.63 -2.8 284,690 + DvMF_0249 0.67 -3.4 285,200 + +0.9 285,200 + -0.4 285,328 - -1.1 285,592 + DvMF_0250 0.17 -0.9 285,722 - DvMF_0250 0.24 -1.1 285,897 - DvMF_0250 0.33 -0.7 285,988 + DvMF_0250 0.37 -1.1 286,102 - DvMF_0250 0.43 -0.8
Or see this region's nucleotide sequence