Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0925

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
1,079,858	-		Shewana3_0924	0.22	+0.3
1,079,887	-		Shewana3_0924	0.25	+2.5
1,080,108	+		Shewana3_0924	0.50	+0.6
1,080,221	+		Shewana3_0924	0.62	-1.2
1,080,234	+		Shewana3_0924	0.64	+1.3
1,080,269	+		Shewana3_0924	0.68	-3.7
1,080,269	+		Shewana3_0924	0.68	-0.2
1,080,277	-		Shewana3_0924	0.69	+0.3
1,080,561	-				-1.7
1,080,563	+				-0.2
1,080,563	+				+0.2
1,080,584	+				-0.8
1,080,751	-				+0.9
1,080,848	-		Shewana3_0925	0.13	-2.2
1,081,043	+		Shewana3_0925	0.38	+2.1
1,081,095	+		Shewana3_0925	0.44	+0.5
1,081,103	-		Shewana3_0925	0.45	+0.5
1,081,121	+		Shewana3_0925	0.48	+0.2
1,081,305	-		Shewana3_0925	0.71	+5.1
1,081,338	+		Shewana3_0925	0.76	+0.6
1,081,338	+		Shewana3_0925	0.76	-3.7
1,081,346	-		Shewana3_0925	0.77	-0.8
1,081,396	+		Shewana3_0925	0.83	-0.0
1,081,430	+		Shewana3_0925	0.87	+1.0
1,081,430	+		Shewana3_0925	0.87	+1.5
1,081,430	+		Shewana3_0925	0.87	-2.0
1,081,438	-		Shewana3_0925	0.88	+0.1
1,081,444	-		Shewana3_0925	0.89	+0.2
1,081,445	-		Shewana3_0925	0.89	+0.0
1,081,469	-				-1.7
1,081,510	-				-1.2
1,081,541	+				+0.5
1,081,556	-				+0.4
1,081,564	+				-0.1
1,081,597	+				-1.4
1,081,645	+				+0.4
1,081,685	+				-0.5
1,081,699	+				+0.5
1,081,699	+				+0.9
1,081,706	-				-0.0
1,081,717	-				-0.2
1,081,727	-				-1.5
1,081,732	-				-1.1
1,081,732	-				+0.2
1,081,761	+				+0.5
1,081,764	+				-1.0
1,081,764	+				-0.4
1,081,776	+				+0.6
1,081,803	+				+0.5
1,081,853	+				-3.2
1,081,857	+				+0.2
1,081,858	+				-0.6
1,081,865	+				+0.4
1,081,865	-				-0.1
1,081,865	-				+0.5
1,081,865	-				-0.1
1,081,900	-				-0.2
1,081,910	-				+0.0
1,081,914	-				-2.7
1,081,916	+				-1.1
1,081,916	+				+0.1
1,081,916	+				-0.1
1,081,916	+				+2.2
1,081,916	+				+0.6
1,081,916	+				-1.9
1,081,917	+				-2.8
1,081,917	+				+0.3
1,081,917	+				-0.7
1,081,917	+				+0.6
1,081,917	+				+0.3
1,081,917	+				-0.7
1,081,917	+				-1.7
1,081,917	+				-0.3
1,081,917	+				-0.8
1,081,917	+				-2.3
1,081,917	+				+0.4
1,081,917	+				+0.4
1,081,917	+				+2.5
1,081,923	+				-2.1
1,081,923	+				+0.6
1,081,924	-				+2.7
1,081,924	-				+0.3
1,081,924	-				+0.1
1,081,924	-				-0.9
1,081,924	-				-1.6
1,081,924	-				-1.1
1,081,924	-				-0.9
1,081,924	-				+0.1
1,081,924	-				-0.7
1,081,924	-				-0.2
1,081,924	-				-0.2
1,081,924	-				-0.5
1,081,924	-				+0.0
1,081,925	-				-0.3
1,081,925	-				+0.6
1,081,925	-				+1.0
1,081,925	-				+2.3
1,081,925	-				-4.1
1,081,925	-				-2.7
1,081,925	-				-0.1
1,081,925	-				-1.3
1,081,925	-				-0.9
1,081,925	-				-0.3
1,081,925	-				-1.0
1,081,925	-				+0.5
1,081,925	-				-1.0
1,081,925	-				+0.4
1,081,925	-				+0.5
1,081,925	-				-1.4
1,081,925	-				+1.9
1,081,925	-				-1.3
1,081,925	-				+0.3
1,081,925	-				+0.1
1,081,925	-				-0.8
1,081,925	-				-0.7
1,081,925	-				-0.2
1,081,925	-				-2.1
1,081,931	-				-0.5
1,081,931	-				+0.5
1,081,931	-				-0.0
1,081,931	-				-0.0
1,081,931	-				-1.7
1,081,965	-				-0.1
1,081,967	+				+0.1
1,081,967	+				+1.0
1,081,967	+				+0.1
1,081,967	-				-1.5
1,081,975	-				+0.7
1,081,975	-				+1.6
1,081,975	-				+0.5
1,082,000	-				+0.8
1,082,024	-				+2.3
1,082,063	+				-1.2
1,082,071	-				-0.1
1,082,119	-				+0.9
1,082,133	+				-1.4
1,082,140	+		Shewana3_0926	0.11	+0.4
1,082,160	-		Shewana3_0926	0.16	+0.4
1,082,192	+		Shewana3_0926	0.25	-0.8
1,082,192	+		Shewana3_0926	0.25	-0.7
1,082,194	-		Shewana3_0926	0.25	+1.4
1,082,200	-		Shewana3_0926	0.27	-0.1
1,082,201	-		Shewana3_0926	0.27	+0.2
1,082,201	-		Shewana3_0926	0.27	-0.5
1,082,204	+		Shewana3_0926	0.28	-0.2
1,082,212	-		Shewana3_0926	0.30	-0.2
1,082,212	-		Shewana3_0926	0.30	-0.8
1,082,212	-		Shewana3_0926	0.30	+0.3
1,082,212	-		Shewana3_0926	0.30	-1.1
1,082,230	+		Shewana3_0926	0.34	+0.3
1,082,231	+		Shewana3_0926	0.35	-1.4
1,082,237	+		Shewana3_0926	0.36	+0.8
1,082,238	-		Shewana3_0926	0.36	-1.0
1,082,245	-		Shewana3_0926	0.38	+0.5
1,082,251	+		Shewana3_0926	0.40	+0.6
1,082,256	+		Shewana3_0926	0.41	-1.1
1,082,264	-		Shewana3_0926	0.43	+1.2
1,082,285	+		Shewana3_0926	0.49	-1.5
1,082,342	-		Shewana3_0926	0.63	+0.7
1,082,344	+		Shewana3_0926	0.64	+0.6
1,082,344	+		Shewana3_0926	0.64	-0.5
1,082,344	+		Shewana3_0926	0.64	-1.2
1,082,344	+		Shewana3_0926	0.64	+0.8
1,082,344	+		Shewana3_0926	0.64	-0.8
1,082,344	+		Shewana3_0926	0.64	+0.7
1,082,344	+		Shewana3_0926	0.64	+1.0
1,082,344	+		Shewana3_0926	0.64	+0.5
1,082,344	+		Shewana3_0926	0.64	+0.5
1,082,344	+		Shewana3_0926	0.64	-0.8
1,082,352	-		Shewana3_0926	0.66	-0.0
1,082,352	-		Shewana3_0926	0.66	+0.2
1,082,352	-		Shewana3_0926	0.66	+0.4
1,082,352	-		Shewana3_0926	0.66	-1.0
1,082,352	-		Shewana3_0926	0.66	+0.3
1,082,352	-		Shewana3_0926	0.66	-0.1
1,082,355	+		Shewana3_0926	0.67	-1.1
1,082,368	-		Shewana3_0926	0.70	-1.3
1,082,386	+		Shewana3_0926	0.75	+0.5
1,082,386	-		Shewana3_0926	0.75	+1.1
1,082,402	-		Shewana3_0926	0.79	+0.1
1,082,410	-		Shewana3_0926	0.81	-1.0
1,082,410	-		Shewana3_0926	0.81	+0.4
1,082,412	+		Shewana3_0926	0.81	+0.3
1,082,449	+				-0.3
1,082,496	+				-0.1
1,082,497	-				-1.1
1,082,514	-				-0.4