Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4573 and Ac3H11_4574 are separated by 100 nucleotides Ac3H11_4574 and Ac3H11_4575 are separated by 5 nucleotides Ac3H11_4575 and Ac3H11_4576 are separated by 433 nucleotides Ac3H11_4576 and Ac3H11_4577 are separated by 221 nucleotides
Ac3H11_4573 - Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA, at 169,634 to 172,930
_4573
Ac3H11_4574 - hypothetical protein, at 173,031 to 173,426
_4574
Ac3H11_4575 - Permease of the drug/metabolite transporter (DMT) superfamily, at 173,432 to 174,628
_4575
Ac3H11_4576 - hypothetical protein, at 175,062 to 175,379
_4576
Ac3H11_4577 - Superoxide dismutase SodM-like protein ChrF, at 175,601 to 175,915
_4577
Position (kb) 173
174
175 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 172.601 kb on + strand at 172.601 kb on + strand at 172.601 kb on + strand at 172.601 kb on + strand at 172.601 kb on + strand at 172.601 kb on + strand at 172.750 kb on + strand at 172.912 kb on - strand at 172.912 kb on - strand at 172.912 kb on - strand at 172.947 kb on - strand at 172.947 kb on - strand at 172.947 kb on - strand at 172.947 kb on - strand at 172.968 kb on - strand at 173.212 kb on - strand, within Ac3H11_4574 at 173.212 kb on - strand, within Ac3H11_4574 at 173.212 kb on - strand, within Ac3H11_4574 at 173.212 kb on - strand, within Ac3H11_4574 at 173.212 kb on - strand, within Ac3H11_4574 at 173.212 kb on - strand, within Ac3H11_4574 at 173.408 kb on - strand at 173.424 kb on + strand at 173.424 kb on + strand at 173.424 kb on + strand at 173.424 kb on + strand at 173.424 kb on + strand at 173.424 kb on + strand at 173.425 kb on - strand at 173.425 kb on - strand at 173.425 kb on - strand at 173.573 kb on + strand, within Ac3H11_4575 at 173.574 kb on - strand, within Ac3H11_4575 at 173.574 kb on - strand, within Ac3H11_4575 at 173.574 kb on - strand, within Ac3H11_4575 at 173.574 kb on - strand, within Ac3H11_4575 at 173.574 kb on - strand, within Ac3H11_4575 at 173.688 kb on + strand, within Ac3H11_4575 at 173.688 kb on + strand, within Ac3H11_4575 at 173.688 kb on + strand, within Ac3H11_4575 at 173.689 kb on - strand, within Ac3H11_4575 at 173.689 kb on - strand, within Ac3H11_4575 at 173.795 kb on + strand, within Ac3H11_4575 at 173.795 kb on + strand, within Ac3H11_4575 at 173.795 kb on + strand, within Ac3H11_4575 at 173.795 kb on + strand, within Ac3H11_4575 at 173.795 kb on + strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.796 kb on - strand, within Ac3H11_4575 at 173.797 kb on + strand, within Ac3H11_4575 at 173.994 kb on + strand, within Ac3H11_4575 at 173.994 kb on + strand, within Ac3H11_4575 at 174.082 kb on - strand, within Ac3H11_4575 at 174.082 kb on - strand, within Ac3H11_4575 at 174.082 kb on - strand, within Ac3H11_4575 at 174.514 kb on + strand at 174.514 kb on + strand at 174.515 kb on - strand at 174.515 kb on - strand at 174.515 kb on - strand at 174.515 kb on - strand at 174.551 kb on - strand at 174.743 kb on + strand at 174.744 kb on - strand at 174.744 kb on - strand at 174.965 kb on + strand at 174.965 kb on + strand at 174.965 kb on + strand at 174.965 kb on + strand at 174.966 kb on - strand at 174.966 kb on - strand at 174.999 kb on + strand at 174.999 kb on + strand at 175.044 kb on - strand at 175.097 kb on - strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.276 kb on + strand, within Ac3H11_4576 at 175.277 kb on - strand, within Ac3H11_4576 at 175.277 kb on - strand, within Ac3H11_4576 at 175.277 kb on - strand, within Ac3H11_4576 at 175.277 kb on - strand at 175.277 kb on - strand, within Ac3H11_4576 at 175.277 kb on - strand, within Ac3H11_4576 at 175.424 kb on + strand at 175.424 kb on + strand at 175.425 kb on - strand at 175.425 kb on - strand at 175.425 kb on - strand at 175.445 kb on + strand at 175.446 kb on - strand at 175.469 kb on - strand at 175.469 kb on - strand at 175.497 kb on + strand at 175.507 kb on + strand at 175.507 kb on + strand at 175.507 kb on + strand at 175.507 kb on + strand at 175.507 kb on + strand at 175.507 kb on + strand at 175.508 kb on - strand at 175.508 kb on - strand at 175.508 kb on - strand at 175.508 kb on - strand at 175.530 kb on + strand at 175.531 kb on - strand at 175.531 kb on - strand at 175.550 kb on + strand at 175.550 kb on + strand at 175.551 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 172,601 + +3.0 172,601 + +1.6 172,601 + +1.9 172,601 + -0.0 172,601 + +1.5 172,601 + -1.6 172,750 + +2.1 172,912 - -2.3 172,912 - -1.3 172,912 - -0.4 172,947 - +0.1 172,947 - +0.1 172,947 - +1.0 172,947 - +0.9 172,968 - +0.2 173,212 - Ac3H11_4574 0.46 +0.0 173,212 - Ac3H11_4574 0.46 -0.8 173,212 - Ac3H11_4574 0.46 -0.3 173,212 - Ac3H11_4574 0.46 +0.5 173,212 - Ac3H11_4574 0.46 -0.2 173,212 - Ac3H11_4574 0.46 -3.6 173,408 - -0.9 173,424 + +0.2 173,424 + +0.3 173,424 + +0.3 173,424 + +1.2 173,424 + -0.3 173,424 + +0.2 173,425 - +0.4 173,425 - -0.0 173,425 - +0.9 173,573 + Ac3H11_4575 0.12 -1.3 173,574 - Ac3H11_4575 0.12 -1.6 173,574 - Ac3H11_4575 0.12 +0.3 173,574 - Ac3H11_4575 0.12 +0.4 173,574 - Ac3H11_4575 0.12 -0.1 173,574 - Ac3H11_4575 0.12 -0.7 173,688 + Ac3H11_4575 0.21 -0.8 173,688 + Ac3H11_4575 0.21 -0.3 173,688 + Ac3H11_4575 0.21 -0.6 173,689 - Ac3H11_4575 0.21 +0.2 173,689 - Ac3H11_4575 0.21 -1.0 173,795 + Ac3H11_4575 0.30 +0.4 173,795 + Ac3H11_4575 0.30 +0.3 173,795 + Ac3H11_4575 0.30 +1.4 173,795 + Ac3H11_4575 0.30 -0.3 173,795 + Ac3H11_4575 0.30 -2.7 173,796 - Ac3H11_4575 0.30 -1.4 173,796 - Ac3H11_4575 0.30 +0.4 173,796 - Ac3H11_4575 0.30 -0.0 173,796 - Ac3H11_4575 0.30 +1.2 173,796 - Ac3H11_4575 0.30 -0.3 173,796 - Ac3H11_4575 0.30 +0.3 173,796 - Ac3H11_4575 0.30 +0.4 173,796 - Ac3H11_4575 0.30 -1.3 173,796 - Ac3H11_4575 0.30 +0.3 173,796 - Ac3H11_4575 0.30 -0.3 173,796 - Ac3H11_4575 0.30 -2.3 173,797 + Ac3H11_4575 0.30 -0.2 173,994 + Ac3H11_4575 0.47 -0.4 173,994 + Ac3H11_4575 0.47 -2.0 174,082 - Ac3H11_4575 0.54 -1.8 174,082 - Ac3H11_4575 0.54 -1.0 174,082 - Ac3H11_4575 0.54 +1.1 174,514 + -0.2 174,514 + -0.7 174,515 - +1.5 174,515 - -2.0 174,515 - +1.2 174,515 - +0.5 174,551 - -0.2 174,743 + +1.0 174,744 - +0.2 174,744 - -0.2 174,965 + +0.9 174,965 + -0.6 174,965 + -1.3 174,965 + +1.3 174,966 - -1.4 174,966 - +1.0 174,999 + +0.2 174,999 + -0.8 175,044 - -0.6 175,097 - Ac3H11_4576 0.11 +0.4 175,276 + Ac3H11_4576 0.67 +0.3 175,276 + Ac3H11_4576 0.67 +1.3 175,276 + Ac3H11_4576 0.67 +2.0 175,276 + Ac3H11_4576 0.67 -0.3 175,276 + Ac3H11_4576 0.67 +0.1 175,276 + Ac3H11_4576 0.67 +0.8 175,276 + Ac3H11_4576 0.67 -0.5 175,277 - Ac3H11_4576 0.68 +0.8 175,277 - Ac3H11_4576 0.68 -1.3 175,277 - Ac3H11_4576 0.68 -2.0 175,277 - -0.0 175,277 - Ac3H11_4576 0.68 +0.7 175,277 - Ac3H11_4576 0.68 +0.2 175,424 + +0.4 175,424 + -0.8 175,425 - +0.4 175,425 - +0.1 175,425 - -1.8 175,445 + -1.4 175,446 - +0.1 175,469 - +0.3 175,469 - +0.6 175,497 + -0.4 175,507 + +0.6 175,507 + +0.2 175,507 + -0.0 175,507 + +0.1 175,507 + -1.4 175,507 + -0.1 175,508 - +0.2 175,508 - +0.6 175,508 - -0.1 175,508 - -1.2 175,530 + -1.1 175,531 - -0.0 175,531 - -0.1 175,550 + -2.1 175,550 + +0.4 175,551 - +0.7
Or see this region's nucleotide sequence