Experiment: 3 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2844 and DvMF_2845 are separated by 291 nucleotides DvMF_2845 and DvMF_2846 are separated by 321 nucleotides
DvMF_2844: DvMF_2844 - histidine kinase (RefSeq), at 3,592,368 to 3,594,029
_2844
DvMF_2845: DvMF_2845 - excinuclease ABC, C subunit (RefSeq), at 3,594,321 to 3,596,609
_2845
DvMF_2846: DvMF_2846 - hypothetical protein (RefSeq), at 3,596,931 to 3,598,325
_2846
Position (kb)
3594
3595
3596
3597 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3593.585 kb on + strand, within DvMF_2844 at 3593.593 kb on - strand, within DvMF_2844 at 3593.770 kb on - strand, within DvMF_2844 at 3593.847 kb on + strand, within DvMF_2844 at 3593.855 kb on - strand, within DvMF_2844 at 3594.083 kb on + strand at 3594.083 kb on + strand at 3594.091 kb on - strand at 3594.101 kb on - strand at 3594.717 kb on + strand, within DvMF_2845 at 3594.739 kb on - strand, within DvMF_2845 at 3594.852 kb on + strand, within DvMF_2845 at 3595.135 kb on - strand, within DvMF_2845 at 3595.253 kb on - strand, within DvMF_2845 at 3595.336 kb on + strand, within DvMF_2845 at 3595.571 kb on + strand, within DvMF_2845 at 3595.690 kb on + strand, within DvMF_2845 at 3595.690 kb on + strand, within DvMF_2845 at 3595.698 kb on - strand, within DvMF_2845 at 3595.698 kb on - strand, within DvMF_2845 at 3595.698 kb on - strand, within DvMF_2845 at 3595.802 kb on + strand, within DvMF_2845 at 3595.824 kb on + strand, within DvMF_2845 at 3595.932 kb on - strand, within DvMF_2845 at 3596.075 kb on + strand, within DvMF_2845 at 3596.082 kb on + strand, within DvMF_2845 at 3596.083 kb on - strand, within DvMF_2845 at 3596.083 kb on - strand, within DvMF_2845 at 3596.083 kb on - strand, within DvMF_2845 at 3596.083 kb on - strand, within DvMF_2845 at 3596.083 kb on - strand, within DvMF_2845 at 3596.153 kb on + strand, within DvMF_2845 at 3596.153 kb on + strand, within DvMF_2845 at 3596.156 kb on - strand, within DvMF_2845 at 3596.256 kb on + strand, within DvMF_2845 at 3596.347 kb on + strand, within DvMF_2845 at 3596.511 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3 days starvation remove 3,593,585 + DvMF_2844 0.73 +1.5 3,593,593 - DvMF_2844 0.74 +1.1 3,593,770 - DvMF_2844 0.84 +1.3 3,593,847 + DvMF_2844 0.89 +1.2 3,593,855 - DvMF_2844 0.89 +0.8 3,594,083 + -0.4 3,594,083 + -1.1 3,594,091 - -0.1 3,594,101 - -1.4 3,594,717 + DvMF_2845 0.17 +0.4 3,594,739 - DvMF_2845 0.18 +1.4 3,594,852 + DvMF_2845 0.23 -3.1 3,595,135 - DvMF_2845 0.36 -0.5 3,595,253 - DvMF_2845 0.41 -0.3 3,595,336 + DvMF_2845 0.44 -0.9 3,595,571 + DvMF_2845 0.55 -0.2 3,595,690 + DvMF_2845 0.60 -0.0 3,595,690 + DvMF_2845 0.60 -0.8 3,595,698 - DvMF_2845 0.60 -1.9 3,595,698 - DvMF_2845 0.60 -0.7 3,595,698 - DvMF_2845 0.60 -0.3 3,595,802 + DvMF_2845 0.65 -0.8 3,595,824 + DvMF_2845 0.66 -0.1 3,595,932 - DvMF_2845 0.70 -1.9 3,596,075 + DvMF_2845 0.77 +0.0 3,596,082 + DvMF_2845 0.77 -1.2 3,596,083 - DvMF_2845 0.77 -0.1 3,596,083 - DvMF_2845 0.77 +0.3 3,596,083 - DvMF_2845 0.77 -1.1 3,596,083 - DvMF_2845 0.77 -0.4 3,596,083 - DvMF_2845 0.77 -1.4 3,596,153 + DvMF_2845 0.80 -1.3 3,596,153 + DvMF_2845 0.80 -0.5 3,596,156 - DvMF_2845 0.80 -0.5 3,596,256 + DvMF_2845 0.85 -0.7 3,596,347 + DvMF_2845 0.89 -0.4 3,596,511 + -1.7
Or see this region's nucleotide sequence