Experiment: 3 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2671 and DvMF_2672 overlap by 11 nucleotides DvMF_2672 and DvMF_2673 are separated by 73 nucleotides DvMF_2673 and DvMF_2674 are separated by 83 nucleotides
DvMF_2671: DvMF_2671 - Aldehyde ferredoxin oxidoreductase (RefSeq), at 3,373,042 to 3,374,847
_2671
DvMF_2672: DvMF_2672 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,374,837 to 3,375,379
_2672
DvMF_2673: DvMF_2673 - Phosphomannomutase (RefSeq), at 3,375,453 to 3,376,847
_2673
DvMF_2674: DvMF_2674 - HflK protein (RefSeq), at 3,376,931 to 3,378,097
_2674
Position (kb)
3375
3376
3377 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3374.468 kb on - strand, within DvMF_2671 at 3374.481 kb on + strand, within DvMF_2671 at 3374.637 kb on - strand, within DvMF_2671 at 3374.734 kb on + strand at 3375.228 kb on + strand, within DvMF_2672 at 3375.450 kb on + strand at 3375.465 kb on + strand at 3375.497 kb on - strand at 3375.533 kb on - strand at 3375.610 kb on - strand, within DvMF_2673 at 3375.629 kb on - strand, within DvMF_2673 at 3376.237 kb on + strand, within DvMF_2673 at 3377.281 kb on - strand, within DvMF_2674 at 3377.353 kb on + strand, within DvMF_2674 at 3377.421 kb on - strand, within DvMF_2674 at 3377.623 kb on + strand, within DvMF_2674 at 3377.651 kb on - strand, within DvMF_2674 at 3377.841 kb on - strand, within DvMF_2674 at 3377.841 kb on - strand, within DvMF_2674
Per-strain Table
Position Strand Gene LocusTag Fraction 3 days starvation remove 3,374,468 - DvMF_2671 0.79 -0.2 3,374,481 + DvMF_2671 0.80 -0.8 3,374,637 - DvMF_2671 0.88 -0.9 3,374,734 + -0.8 3,375,228 + DvMF_2672 0.72 -0.7 3,375,450 + -0.7 3,375,465 + -0.5 3,375,497 - -0.2 3,375,533 - -2.3 3,375,610 - DvMF_2673 0.11 -2.3 3,375,629 - DvMF_2673 0.13 -2.9 3,376,237 + DvMF_2673 0.56 -1.5 3,377,281 - DvMF_2674 0.30 -0.8 3,377,353 + DvMF_2674 0.36 -0.1 3,377,421 - DvMF_2674 0.42 +0.3 3,377,623 + DvMF_2674 0.59 -0.1 3,377,651 - DvMF_2674 0.62 -0.6 3,377,841 - DvMF_2674 0.78 -0.4 3,377,841 - DvMF_2674 0.78 -0.6
Or see this region's nucleotide sequence