Experiment: 3 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1215 and DvMF_1216 are separated by 374 nucleotides DvMF_1216 and DvMF_1217 are separated by 2 nucleotides
DvMF_1215: DvMF_1215 - molybdopterin-guanine dinucleotide biosynthesis protein B (RefSeq), at 1,496,241 to 1,496,951
_1215
DvMF_1216: DvMF_1216 - formate dehydrogenase, beta subunit, putative (RefSeq), at 1,497,326 to 1,498,033
_1216
DvMF_1217: DvMF_1217 - formate dehydrogenase, alpha subunit (RefSeq), at 1,498,036 to 1,501,062
_1217
Position (kb)
1497
1498
1499 Strain fitness (log2 ratio)
-1
0
1 at 1496.452 kb on - strand, within DvMF_1215 at 1496.454 kb on + strand, within DvMF_1215 at 1496.509 kb on + strand, within DvMF_1215 at 1496.515 kb on - strand, within DvMF_1215 at 1496.636 kb on + strand, within DvMF_1215 at 1496.737 kb on + strand, within DvMF_1215 at 1496.745 kb on - strand, within DvMF_1215 at 1496.745 kb on - strand, within DvMF_1215 at 1496.777 kb on - strand, within DvMF_1215 at 1496.835 kb on - strand, within DvMF_1215 at 1497.152 kb on + strand at 1497.326 kb on - strand at 1497.326 kb on - strand at 1497.444 kb on - strand, within DvMF_1216 at 1497.559 kb on + strand, within DvMF_1216 at 1497.820 kb on + strand, within DvMF_1216 at 1498.325 kb on - strand at 1498.706 kb on + strand, within DvMF_1217 at 1498.839 kb on + strand, within DvMF_1217 at 1498.943 kb on + strand, within DvMF_1217 at 1498.951 kb on - strand, within DvMF_1217 at 1498.951 kb on - strand, within DvMF_1217 at 1498.951 kb on - strand, within DvMF_1217 at 1498.962 kb on + strand, within DvMF_1217
Per-strain Table
Position Strand Gene LocusTag Fraction 3 days starvation remove 1,496,452 - DvMF_1215 0.30 +0.1 1,496,454 + DvMF_1215 0.30 -0.1 1,496,509 + DvMF_1215 0.38 -0.5 1,496,515 - DvMF_1215 0.39 +0.2 1,496,636 + DvMF_1215 0.56 +0.2 1,496,737 + DvMF_1215 0.70 +0.2 1,496,745 - DvMF_1215 0.71 -0.2 1,496,745 - DvMF_1215 0.71 -0.5 1,496,777 - DvMF_1215 0.75 -0.0 1,496,835 - DvMF_1215 0.84 -0.5 1,497,152 + -0.3 1,497,326 - -0.9 1,497,326 - -0.3 1,497,444 - DvMF_1216 0.17 -1.7 1,497,559 + DvMF_1216 0.33 +0.2 1,497,820 + DvMF_1216 0.70 -1.1 1,498,325 - +0.5 1,498,706 + DvMF_1217 0.22 -0.4 1,498,839 + DvMF_1217 0.27 +1.4 1,498,943 + DvMF_1217 0.30 -0.3 1,498,951 - DvMF_1217 0.30 +0.4 1,498,951 - DvMF_1217 0.30 -0.1 1,498,951 - DvMF_1217 0.30 -0.4 1,498,962 + DvMF_1217 0.31 +0.1
Or see this region's nucleotide sequence