Experiment: 3 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1063 and DvMF_1064 are separated by 1 nucleotides DvMF_1064 and DvMF_1065 are separated by 164 nucleotides DvMF_1065 and DvMF_1066 are separated by 3 nucleotides DvMF_1066 and DvMF_1067 overlap by 4 nucleotides
DvMF_1063: DvMF_1063 - hypothetical protein (RefSeq), at 1,304,498 to 1,305,007
_1063
DvMF_1064: DvMF_1064 - hypothetical protein (RefSeq), at 1,305,009 to 1,305,587
_1064
DvMF_1065: DvMF_1065 - hypothetical protein (RefSeq), at 1,305,752 to 1,307,830
_1065
DvMF_1066: DvMF_1066 - hypothetical protein (RefSeq), at 1,307,834 to 1,308,430
_1066
DvMF_1067: DvMF_1067 - hypothetical protein (RefSeq), at 1,308,427 to 1,309,047
_1067
Position (kb)
1305
1306
1307
1308 Strain fitness (log2 ratio)
-2
-1
0
1 at 1304.840 kb on - strand, within DvMF_1063 at 1304.950 kb on + strand, within DvMF_1063 at 1305.084 kb on - strand, within DvMF_1064 at 1305.350 kb on - strand, within DvMF_1064 at 1305.434 kb on + strand, within DvMF_1064 at 1305.485 kb on - strand, within DvMF_1064 at 1305.717 kb on - strand at 1305.838 kb on + strand at 1305.893 kb on + strand at 1305.918 kb on + strand at 1305.931 kb on - strand at 1305.968 kb on - strand, within DvMF_1065 at 1306.082 kb on + strand, within DvMF_1065 at 1306.408 kb on + strand, within DvMF_1065 at 1306.454 kb on - strand, within DvMF_1065 at 1306.479 kb on - strand, within DvMF_1065 at 1306.479 kb on - strand, within DvMF_1065 at 1306.594 kb on - strand, within DvMF_1065 at 1306.763 kb on + strand, within DvMF_1065 at 1306.894 kb on + strand, within DvMF_1065 at 1307.128 kb on - strand, within DvMF_1065 at 1307.184 kb on + strand, within DvMF_1065 at 1307.212 kb on - strand, within DvMF_1065 at 1307.247 kb on - strand, within DvMF_1065 at 1307.333 kb on - strand, within DvMF_1065 at 1307.443 kb on + strand, within DvMF_1065 at 1307.471 kb on + strand, within DvMF_1065 at 1307.506 kb on - strand, within DvMF_1065 at 1307.602 kb on + strand, within DvMF_1065 at 1307.999 kb on + strand, within DvMF_1066 at 1308.084 kb on + strand, within DvMF_1066 at 1308.156 kb on - strand, within DvMF_1066 at 1308.312 kb on + strand, within DvMF_1066 at 1308.383 kb on + strand at 1308.644 kb on + strand, within DvMF_1067 at 1308.721 kb on + strand, within DvMF_1067 at 1308.729 kb on + strand, within DvMF_1067
Per-strain Table
Position Strand Gene LocusTag Fraction 3 days starvation remove 1,304,840 - DvMF_1063 0.67 -0.2 1,304,950 + DvMF_1063 0.89 -0.3 1,305,084 - DvMF_1064 0.13 -1.9 1,305,350 - DvMF_1064 0.59 -1.7 1,305,434 + DvMF_1064 0.73 -0.1 1,305,485 - DvMF_1064 0.82 -1.8 1,305,717 - +1.0 1,305,838 + -0.7 1,305,893 + +0.1 1,305,918 + -0.8 1,305,931 - +0.6 1,305,968 - DvMF_1065 0.10 -1.0 1,306,082 + DvMF_1065 0.16 -0.5 1,306,408 + DvMF_1065 0.32 -0.4 1,306,454 - DvMF_1065 0.34 -1.5 1,306,479 - DvMF_1065 0.35 -0.7 1,306,479 - DvMF_1065 0.35 -0.8 1,306,594 - DvMF_1065 0.41 +0.9 1,306,763 + DvMF_1065 0.49 +0.8 1,306,894 + DvMF_1065 0.55 -0.6 1,307,128 - DvMF_1065 0.66 -0.2 1,307,184 + DvMF_1065 0.69 -1.0 1,307,212 - DvMF_1065 0.70 -1.3 1,307,247 - DvMF_1065 0.72 -0.7 1,307,333 - DvMF_1065 0.76 -0.4 1,307,443 + DvMF_1065 0.81 -0.7 1,307,471 + DvMF_1065 0.83 +0.3 1,307,506 - DvMF_1065 0.84 -0.7 1,307,602 + DvMF_1065 0.89 -0.6 1,307,999 + DvMF_1066 0.28 +0.4 1,308,084 + DvMF_1066 0.42 -0.3 1,308,156 - DvMF_1066 0.54 -1.1 1,308,312 + DvMF_1066 0.80 -0.2 1,308,383 + -0.7 1,308,644 + DvMF_1067 0.35 -1.2 1,308,721 + DvMF_1067 0.47 -0.5 1,308,729 + DvMF_1067 0.49 +0.4
Or see this region's nucleotide sequence