Experiment: 3 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0036 and DvMF_0037 are separated by 2 nucleotides DvMF_0037 and DvMF_0038 are separated by 126 nucleotides
DvMF_0036: DvMF_0036 - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq), at 46,313 to 49,459
_0036
DvMF_0037: DvMF_0037 - hypothetical protein (RefSeq), at 49,462 to 50,142
_0037
DvMF_0038: DvMF_0038 - protein of unknown function DUF140 (RefSeq), at 50,269 to 51,414
_0038
Position (kb)
49
50
51 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 48.462 kb on - strand, within DvMF_0036 at 48.496 kb on - strand, within DvMF_0036 at 48.496 kb on - strand, within DvMF_0036 at 48.513 kb on - strand, within DvMF_0036 at 48.529 kb on - strand, within DvMF_0036 at 48.529 kb on - strand, within DvMF_0036 at 48.546 kb on - strand, within DvMF_0036 at 48.546 kb on - strand, within DvMF_0036 at 48.937 kb on - strand, within DvMF_0036 at 49.459 kb on + strand at 49.531 kb on + strand, within DvMF_0037 at 49.600 kb on + strand, within DvMF_0037 at 49.644 kb on + strand, within DvMF_0037 at 49.660 kb on + strand, within DvMF_0037 at 49.709 kb on - strand, within DvMF_0037 at 49.822 kb on - strand, within DvMF_0037 at 49.836 kb on + strand, within DvMF_0037 at 49.860 kb on + strand, within DvMF_0037 at 49.946 kb on - strand, within DvMF_0037 at 50.114 kb on + strand at 50.548 kb on + strand, within DvMF_0038 at 50.574 kb on - strand, within DvMF_0038 at 50.579 kb on - strand, within DvMF_0038 at 50.650 kb on + strand, within DvMF_0038 at 50.661 kb on + strand, within DvMF_0038 at 50.669 kb on - strand, within DvMF_0038 at 50.680 kb on + strand, within DvMF_0038 at 50.683 kb on - strand, within DvMF_0038 at 50.688 kb on - strand, within DvMF_0038 at 50.758 kb on + strand, within DvMF_0038 at 50.766 kb on + strand, within DvMF_0038 at 50.794 kb on - strand, within DvMF_0038 at 50.833 kb on + strand, within DvMF_0038 at 50.836 kb on - strand, within DvMF_0038 at 50.862 kb on - strand, within DvMF_0038 at 50.862 kb on - strand, within DvMF_0038 at 50.880 kb on + strand, within DvMF_0038 at 50.995 kb on + strand, within DvMF_0038 at 51.037 kb on - strand, within DvMF_0038 at 51.117 kb on + strand, within DvMF_0038 at 51.118 kb on - strand, within DvMF_0038
Per-strain Table
Position Strand Gene LocusTag Fraction 3 days starvation remove 48,462 - DvMF_0036 0.68 +0.0 48,496 - DvMF_0036 0.69 -0.9 48,496 - DvMF_0036 0.69 -0.5 48,513 - DvMF_0036 0.70 -0.5 48,529 - DvMF_0036 0.70 -3.5 48,529 - DvMF_0036 0.70 +0.0 48,546 - DvMF_0036 0.71 -1.1 48,546 - DvMF_0036 0.71 -0.1 48,937 - DvMF_0036 0.83 -0.0 49,459 + -0.5 49,531 + DvMF_0037 0.10 -0.2 49,600 + DvMF_0037 0.20 -0.6 49,644 + DvMF_0037 0.27 -0.5 49,660 + DvMF_0037 0.29 -1.1 49,709 - DvMF_0037 0.36 -1.0 49,822 - DvMF_0037 0.53 -1.3 49,836 + DvMF_0037 0.55 -1.0 49,860 + DvMF_0037 0.58 -0.7 49,946 - DvMF_0037 0.71 -0.0 50,114 + +0.2 50,548 + DvMF_0038 0.24 -0.4 50,574 - DvMF_0038 0.27 +0.3 50,579 - DvMF_0038 0.27 -0.5 50,650 + DvMF_0038 0.33 -0.9 50,661 + DvMF_0038 0.34 -1.3 50,669 - DvMF_0038 0.35 -0.6 50,680 + DvMF_0038 0.36 +0.0 50,683 - DvMF_0038 0.36 -1.1 50,688 - DvMF_0038 0.37 -0.3 50,758 + DvMF_0038 0.43 -0.5 50,766 + DvMF_0038 0.43 -0.8 50,794 - DvMF_0038 0.46 -0.1 50,833 + DvMF_0038 0.49 -0.7 50,836 - DvMF_0038 0.49 -0.3 50,862 - DvMF_0038 0.52 -1.4 50,862 - DvMF_0038 0.52 +0.5 50,880 + DvMF_0038 0.53 -0.1 50,995 + DvMF_0038 0.63 -2.0 51,037 - DvMF_0038 0.67 -0.5 51,117 + DvMF_0038 0.74 -1.3 51,118 - DvMF_0038 0.74 -1.4
Or see this region's nucleotide sequence