Experiment: Nickel (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2539 and Ac3H11_2981 are separated by 110 nucleotides Ac3H11_2981 and Ac3H11_2540 are separated by 217 nucleotides Ac3H11_2540 and Ac3H11_2541 are separated by 230 nucleotides
Ac3H11_2539 - Mlr1315 protein, at 816,625 to 817,491
_2539
Ac3H11_2981 - tRNA-Pro-TGG, at 817,602 to 817,675
_2981
Ac3H11_2540 - Translation initiation factor 1, at 817,893 to 818,141
_2540
Ac3H11_2541 - nitrite efflux transporter, HPP family <small>(from data)</small>, at 818,372 to 819,511
_2541
Position (kb) 817
818
819 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.062 kb on - strand, within Ac3H11_2539 at 817.062 kb on - strand, within Ac3H11_2539 at 817.358 kb on + strand, within Ac3H11_2539 at 817.509 kb on + strand at 817.510 kb on - strand at 817.895 kb on - strand at 818.166 kb on - strand at 818.213 kb on - strand at 818.213 kb on - strand at 818.213 kb on - strand at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.928 kb on + strand, within Ac3H11_2541 at 818.929 kb on - strand, within Ac3H11_2541 at 818.998 kb on + strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 818.999 kb on - strand, within Ac3H11_2541 at 819.015 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.039 kb on + strand, within Ac3H11_2541 at 819.040 kb on - strand, within Ac3H11_2541 at 819.040 kb on - strand, within Ac3H11_2541 at 819.040 kb on - strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.129 kb on + strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541 at 819.130 kb on - strand, within Ac3H11_2541
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.6 mM remove 817,061 + Ac3H11_2539 0.50 +1.8 817,061 + Ac3H11_2539 0.50 -2.0 817,061 + Ac3H11_2539 0.50 -0.3 817,061 + Ac3H11_2539 0.50 -0.8 817,061 + Ac3H11_2539 0.50 -0.2 817,062 - Ac3H11_2539 0.50 -0.0 817,062 - Ac3H11_2539 0.50 +1.2 817,358 + Ac3H11_2539 0.85 -2.3 817,509 + +0.9 817,510 - +1.7 817,895 - -0.6 818,166 - -1.7 818,213 - -0.0 818,213 - +0.6 818,213 - -0.2 818,928 + Ac3H11_2541 0.49 -1.1 818,928 + Ac3H11_2541 0.49 -0.3 818,928 + Ac3H11_2541 0.49 -1.2 818,928 + Ac3H11_2541 0.49 -0.1 818,928 + Ac3H11_2541 0.49 -0.5 818,929 - Ac3H11_2541 0.49 +1.8 818,998 + Ac3H11_2541 0.55 -0.5 818,999 - Ac3H11_2541 0.55 +0.9 818,999 - Ac3H11_2541 0.55 +1.2 818,999 - Ac3H11_2541 0.55 -0.4 818,999 - Ac3H11_2541 0.55 -0.6 819,015 + Ac3H11_2541 0.56 +0.4 819,039 + Ac3H11_2541 0.59 +0.3 819,039 + Ac3H11_2541 0.59 -0.2 819,039 + Ac3H11_2541 0.59 +0.5 819,039 + Ac3H11_2541 0.59 -0.6 819,039 + Ac3H11_2541 0.59 +0.7 819,040 - Ac3H11_2541 0.59 -0.0 819,040 - Ac3H11_2541 0.59 -0.4 819,040 - Ac3H11_2541 0.59 -0.1 819,129 + Ac3H11_2541 0.66 -0.4 819,129 + Ac3H11_2541 0.66 +0.1 819,129 + Ac3H11_2541 0.66 -0.8 819,129 + Ac3H11_2541 0.66 -1.4 819,129 + Ac3H11_2541 0.66 -0.2 819,129 + Ac3H11_2541 0.66 +0.8 819,129 + Ac3H11_2541 0.66 -1.3 819,129 + Ac3H11_2541 0.66 +1.2 819,129 + Ac3H11_2541 0.66 +0.1 819,129 + Ac3H11_2541 0.66 -0.2 819,130 - Ac3H11_2541 0.66 +1.2 819,130 - Ac3H11_2541 0.66 -1.9 819,130 - Ac3H11_2541 0.66 -3.6 819,130 - Ac3H11_2541 0.66 -0.7 819,130 - Ac3H11_2541 0.66 -1.3 819,130 - Ac3H11_2541 0.66 -0.4 819,130 - Ac3H11_2541 0.66 -0.1 819,130 - Ac3H11_2541 0.66 -0.3 819,130 - Ac3H11_2541 0.66 -1.4
Or see this region's nucleotide sequence