Experiment: Nickel (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1176 and Ac3H11_1177 are separated by 112 nucleotides Ac3H11_1177 and Ac3H11_1178 overlap by 4 nucleotides
Ac3H11_1176 - TRAP transporter solute receptor, unknown substrate 3, at 13,799 to 14,836
_1176
Ac3H11_1177 - TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3, at 14,949 to 15,431
_1177
Ac3H11_1178 - TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3, at 15,428 to 16,747
_1178
Position (kb) 14
15
16 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 14.094 kb on - strand, within Ac3H11_1176 at 14.094 kb on - strand, within Ac3H11_1176 at 14.183 kb on + strand, within Ac3H11_1176 at 14.183 kb on + strand, within Ac3H11_1176 at 14.183 kb on + strand, within Ac3H11_1176 at 14.184 kb on - strand, within Ac3H11_1176 at 14.184 kb on - strand, within Ac3H11_1176 at 14.510 kb on + strand, within Ac3H11_1176 at 14.510 kb on + strand, within Ac3H11_1176 at 14.511 kb on - strand, within Ac3H11_1176 at 14.511 kb on - strand, within Ac3H11_1176 at 14.549 kb on + strand, within Ac3H11_1176 at 14.550 kb on - strand, within Ac3H11_1176 at 14.834 kb on + strand at 14.834 kb on + strand at 14.835 kb on - strand at 14.835 kb on - strand at 14.835 kb on - strand at 14.835 kb on - strand at 14.835 kb on - strand at 15.079 kb on - strand, within Ac3H11_1177 at 15.079 kb on - strand, within Ac3H11_1177 at 15.079 kb on - strand, within Ac3H11_1177 at 15.336 kb on + strand, within Ac3H11_1177 at 15.337 kb on - strand, within Ac3H11_1177 at 15.337 kb on - strand, within Ac3H11_1177 at 15.533 kb on + strand at 15.540 kb on - strand at 15.606 kb on - strand, within Ac3H11_1178 at 15.837 kb on - strand, within Ac3H11_1178 at 15.837 kb on - strand, within Ac3H11_1178 at 15.920 kb on + strand, within Ac3H11_1178 at 15.921 kb on - strand, within Ac3H11_1178 at 15.999 kb on - strand, within Ac3H11_1178 at 15.999 kb on - strand, within Ac3H11_1178 at 15.999 kb on - strand, within Ac3H11_1178 at 16.019 kb on + strand, within Ac3H11_1178 at 16.054 kb on + strand, within Ac3H11_1178 at 16.055 kb on - strand, within Ac3H11_1178 at 16.142 kb on + strand, within Ac3H11_1178 at 16.143 kb on - strand, within Ac3H11_1178 at 16.143 kb on - strand, within Ac3H11_1178 at 16.143 kb on - strand, within Ac3H11_1178 at 16.386 kb on - strand, within Ac3H11_1178 at 16.415 kb on + strand, within Ac3H11_1178 at 16.415 kb on + strand, within Ac3H11_1178 at 16.416 kb on - strand, within Ac3H11_1178 at 16.416 kb on - strand, within Ac3H11_1178 at 16.416 kb on - strand, within Ac3H11_1178
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.6 mM remove 14,094 - Ac3H11_1176 0.28 +0.1 14,094 - Ac3H11_1176 0.28 +0.0 14,183 + Ac3H11_1176 0.37 -0.5 14,183 + Ac3H11_1176 0.37 +0.4 14,183 + Ac3H11_1176 0.37 +0.5 14,184 - Ac3H11_1176 0.37 -0.9 14,184 - Ac3H11_1176 0.37 -2.8 14,510 + Ac3H11_1176 0.68 -3.0 14,510 + Ac3H11_1176 0.68 -0.9 14,511 - Ac3H11_1176 0.69 -1.6 14,511 - Ac3H11_1176 0.69 -1.0 14,549 + Ac3H11_1176 0.72 -0.3 14,550 - Ac3H11_1176 0.72 +0.3 14,834 + -0.9 14,834 + +0.9 14,835 - -0.7 14,835 - -1.2 14,835 - -1.0 14,835 - +0.5 14,835 - -0.2 15,079 - Ac3H11_1177 0.27 -0.2 15,079 - Ac3H11_1177 0.27 +0.3 15,079 - Ac3H11_1177 0.27 -1.3 15,336 + Ac3H11_1177 0.80 -0.7 15,337 - Ac3H11_1177 0.80 +0.0 15,337 - Ac3H11_1177 0.80 +0.6 15,533 + -0.4 15,540 - -0.7 15,606 - Ac3H11_1178 0.13 -1.5 15,837 - Ac3H11_1178 0.31 +0.8 15,837 - Ac3H11_1178 0.31 -1.0 15,920 + Ac3H11_1178 0.37 -0.7 15,921 - Ac3H11_1178 0.37 +0.7 15,999 - Ac3H11_1178 0.43 -0.2 15,999 - Ac3H11_1178 0.43 -0.8 15,999 - Ac3H11_1178 0.43 -0.5 16,019 + Ac3H11_1178 0.45 +0.9 16,054 + Ac3H11_1178 0.47 -1.5 16,055 - Ac3H11_1178 0.47 +1.0 16,142 + Ac3H11_1178 0.54 -0.4 16,143 - Ac3H11_1178 0.54 +0.3 16,143 - Ac3H11_1178 0.54 +0.5 16,143 - Ac3H11_1178 0.54 -3.4 16,386 - Ac3H11_1178 0.73 -0.1 16,415 + Ac3H11_1178 0.75 +0.1 16,415 + Ac3H11_1178 0.75 +0.2 16,416 - Ac3H11_1178 0.75 +0.1 16,416 - Ac3H11_1178 0.75 +0.3 16,416 - Ac3H11_1178 0.75 -0.4
Or see this region's nucleotide sequence