Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24125 and AO353_24130 overlap by 8 nucleotides AO353_24130 and AO353_24135 are separated by 156 nucleotides AO353_24135 and AO353_24140 are separated by 475 nucleotides AO353_24140 and AO353_24145 overlap by 4 nucleotides
AO353_24125: AO353_24125 - hypothetical protein, at 5,310,515 to 5,311,588
_24125
AO353_24130: AO353_24130 - hypothetical protein, at 5,311,581 to 5,311,793
_24130
AO353_24135: AO353_24135 - hypothetical protein, at 5,311,950 to 5,312,291
_24135
AO353_24140: AO353_24140 - hypothetical protein, at 5,312,767 to 5,313,243
_24140
AO353_24145: AO353_24145 - serine/threonine protein kinase, at 5,313,240 to 5,313,953
_24145
Position (kb) 5311
5312
5313 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5310.950 kb on - strand, within AO353_24125 at 5310.971 kb on - strand, within AO353_24125 at 5311.041 kb on + strand, within AO353_24125 at 5311.042 kb on - strand, within AO353_24125 at 5311.069 kb on + strand, within AO353_24125 at 5311.076 kb on + strand at 5311.105 kb on + strand, within AO353_24125 at 5311.117 kb on + strand, within AO353_24125 at 5311.117 kb on + strand, within AO353_24125 at 5311.247 kb on + strand, within AO353_24125 at 5311.251 kb on + strand, within AO353_24125 at 5311.251 kb on + strand, within AO353_24125 at 5311.252 kb on - strand, within AO353_24125 at 5311.252 kb on - strand at 5311.328 kb on - strand, within AO353_24125 at 5311.346 kb on + strand, within AO353_24125 at 5311.539 kb on + strand at 5311.546 kb on - strand at 5311.553 kb on - strand at 5311.557 kb on - strand at 5311.675 kb on + strand, within AO353_24130 at 5311.677 kb on + strand, within AO353_24130 at 5311.677 kb on + strand, within AO353_24130 at 5311.678 kb on - strand, within AO353_24130 at 5311.682 kb on + strand, within AO353_24130 at 5311.808 kb on + strand at 5311.808 kb on + strand at 5311.812 kb on + strand at 5311.830 kb on + strand at 5311.830 kb on + strand at 5311.846 kb on - strand at 5312.006 kb on - strand, within AO353_24135 at 5312.006 kb on - strand, within AO353_24135 at 5312.114 kb on + strand, within AO353_24135 at 5312.115 kb on - strand, within AO353_24135 at 5312.115 kb on - strand, within AO353_24135 at 5312.115 kb on - strand, within AO353_24135 at 5312.243 kb on + strand, within AO353_24135 at 5312.243 kb on + strand, within AO353_24135 at 5312.243 kb on + strand, within AO353_24135 at 5312.244 kb on - strand, within AO353_24135 at 5312.258 kb on - strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.286 kb on + strand at 5312.286 kb on + strand at 5312.286 kb on + strand at 5312.287 kb on - strand at 5312.287 kb on - strand at 5312.287 kb on - strand at 5312.287 kb on - strand at 5312.296 kb on + strand at 5312.296 kb on + strand at 5312.296 kb on + strand at 5312.296 kb on + strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.308 kb on + strand at 5312.308 kb on + strand at 5312.308 kb on + strand at 5312.309 kb on - strand at 5312.309 kb on - strand at 5312.326 kb on + strand at 5312.326 kb on + strand at 5312.326 kb on + strand at 5312.327 kb on - strand at 5312.327 kb on - strand at 5312.327 kb on - strand at 5312.327 kb on - strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.353 kb on + strand at 5312.353 kb on + strand at 5312.354 kb on - strand at 5312.354 kb on - strand at 5312.431 kb on + strand at 5312.432 kb on - strand at 5312.432 kb on - strand at 5312.462 kb on + strand at 5312.471 kb on + strand at 5312.472 kb on - strand at 5312.493 kb on + strand at 5312.493 kb on + strand at 5312.526 kb on + strand at 5312.526 kb on + strand at 5312.526 kb on + strand at 5312.527 kb on - strand at 5312.527 kb on - strand at 5312.537 kb on + strand at 5312.537 kb on + strand at 5312.537 kb on + strand at 5312.552 kb on + strand at 5312.552 kb on + strand at 5312.552 kb on + strand at 5312.573 kb on - strand at 5312.576 kb on + strand at 5312.595 kb on + strand at 5312.659 kb on - strand at 5312.659 kb on - strand at 5312.659 kb on - strand at 5312.690 kb on - strand at 5312.690 kb on - strand at 5312.713 kb on - strand at 5312.725 kb on + strand at 5312.725 kb on + strand at 5312.726 kb on - strand at 5312.728 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.767 kb on - strand at 5312.767 kb on - strand at 5312.767 kb on - strand at 5312.819 kb on + strand, within AO353_24140 at 5312.820 kb on - strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.823 kb on + strand, within AO353_24140 at 5312.824 kb on - strand, within AO353_24140 at 5312.824 kb on - strand, within AO353_24140 at 5312.824 kb on - strand, within AO353_24140 at 5312.824 kb on - strand, within AO353_24140 at 5312.824 kb on - strand, within AO353_24140 at 5312.824 kb on - strand, within AO353_24140 at 5312.856 kb on + strand, within AO353_24140 at 5312.857 kb on - strand, within AO353_24140 at 5312.862 kb on - strand, within AO353_24140 at 5312.911 kb on + strand, within AO353_24140 at 5312.911 kb on + strand, within AO353_24140 at 5312.911 kb on + strand, within AO353_24140 at 5312.911 kb on + strand, within AO353_24140 at 5312.912 kb on - strand, within AO353_24140 at 5312.912 kb on - strand, within AO353_24140 at 5312.912 kb on - strand, within AO353_24140 at 5312.912 kb on - strand, within AO353_24140 at 5312.941 kb on + strand, within AO353_24140 at 5312.941 kb on + strand, within AO353_24140 at 5312.969 kb on + strand, within AO353_24140 at 5312.969 kb on + strand, within AO353_24140 at 5312.969 kb on + strand, within AO353_24140 at 5312.970 kb on - strand at 5313.020 kb on + strand, within AO353_24140 at 5313.051 kb on + strand, within AO353_24140 at 5313.075 kb on + strand, within AO353_24140 at 5313.075 kb on + strand, within AO353_24140 at 5313.075 kb on + strand, within AO353_24140 at 5313.076 kb on - strand, within AO353_24140 at 5313.076 kb on - strand, within AO353_24140 at 5313.076 kb on - strand, within AO353_24140 at 5313.078 kb on + strand, within AO353_24140 at 5313.078 kb on + strand, within AO353_24140 at 5313.079 kb on - strand, within AO353_24140 at 5313.079 kb on - strand, within AO353_24140 at 5313.099 kb on + strand, within AO353_24140 at 5313.100 kb on - strand, within AO353_24140 at 5313.100 kb on - strand, within AO353_24140 at 5313.116 kb on - strand, within AO353_24140 at 5313.216 kb on - strand at 5313.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,310,950 - AO353_24125 0.41 +1.3 5,310,971 - AO353_24125 0.42 -0.4 5,311,041 + AO353_24125 0.49 -0.1 5,311,042 - AO353_24125 0.49 -0.9 5,311,069 + AO353_24125 0.52 -0.2 5,311,076 + +0.6 5,311,105 + AO353_24125 0.55 -0.7 5,311,117 + AO353_24125 0.56 -0.6 5,311,117 + AO353_24125 0.56 -0.6 5,311,247 + AO353_24125 0.68 -1.3 5,311,251 + AO353_24125 0.69 -2.0 5,311,251 + AO353_24125 0.69 -0.2 5,311,252 - AO353_24125 0.69 -0.5 5,311,252 - +1.0 5,311,328 - AO353_24125 0.76 +0.6 5,311,346 + AO353_24125 0.77 -1.0 5,311,539 + +0.2 5,311,546 - -0.3 5,311,553 - +0.7 5,311,557 - -0.1 5,311,675 + AO353_24130 0.44 -0.4 5,311,677 + AO353_24130 0.45 -1.2 5,311,677 + AO353_24130 0.45 +1.6 5,311,678 - AO353_24130 0.46 -1.8 5,311,682 + AO353_24130 0.47 -0.5 5,311,808 + -0.1 5,311,808 + -0.0 5,311,812 + -0.6 5,311,830 + +0.3 5,311,830 + -1.2 5,311,846 - +0.1 5,312,006 - AO353_24135 0.16 +0.7 5,312,006 - AO353_24135 0.16 +0.5 5,312,114 + AO353_24135 0.48 +0.7 5,312,115 - AO353_24135 0.48 +1.6 5,312,115 - AO353_24135 0.48 +0.5 5,312,115 - AO353_24135 0.48 -1.8 5,312,243 + AO353_24135 0.86 -0.0 5,312,243 + AO353_24135 0.86 +1.7 5,312,243 + AO353_24135 0.86 -0.7 5,312,244 - AO353_24135 0.86 -1.8 5,312,258 - -1.2 5,312,278 + -1.5 5,312,278 + -0.8 5,312,278 + +0.3 5,312,278 + -2.2 5,312,278 + +0.2 5,312,278 + -0.6 5,312,282 + +1.0 5,312,282 + +1.0 5,312,282 + +0.1 5,312,282 + +0.4 5,312,282 + -2.2 5,312,282 + +0.5 5,312,282 + +1.0 5,312,282 + +0.7 5,312,282 + -0.6 5,312,283 - +2.3 5,312,283 - +0.3 5,312,283 - +1.4 5,312,283 - -0.3 5,312,283 - +0.5 5,312,283 - +2.0 5,312,286 + -0.6 5,312,286 + -1.3 5,312,286 + +1.0 5,312,287 - -1.8 5,312,287 - -0.6 5,312,287 - -0.6 5,312,287 - +0.2 5,312,296 + -0.0 5,312,296 + +0.1 5,312,296 + -0.0 5,312,296 + -1.2 5,312,297 - +1.4 5,312,297 - +0.7 5,312,297 - -1.8 5,312,297 - -0.5 5,312,297 - -0.3 5,312,308 + -0.2 5,312,308 + +0.4 5,312,308 + +0.2 5,312,309 - +0.6 5,312,309 - -1.1 5,312,326 + -0.8 5,312,326 + -0.5 5,312,326 + +0.8 5,312,327 - +0.7 5,312,327 - +0.2 5,312,327 - -0.9 5,312,327 - -0.6 5,312,328 + -0.0 5,312,328 + -0.0 5,312,328 + +0.2 5,312,328 + +1.0 5,312,328 + -0.2 5,312,328 + +1.1 5,312,328 + -1.0 5,312,328 + -1.2 5,312,328 + -0.6 5,312,328 + +0.6 5,312,328 + -0.8 5,312,328 + +1.0 5,312,328 + +0.6 5,312,328 + +0.3 5,312,329 - +0.7 5,312,329 - +1.4 5,312,329 - -1.1 5,312,329 - +0.5 5,312,329 - -1.0 5,312,329 - +0.4 5,312,329 - +2.2 5,312,329 - -0.3 5,312,329 - +0.8 5,312,329 - -0.0 5,312,329 - -1.0 5,312,329 - +2.0 5,312,329 - -0.0 5,312,329 - -0.6 5,312,353 + +0.6 5,312,353 + -0.3 5,312,354 - -0.6 5,312,354 - -0.2 5,312,431 + -1.2 5,312,432 - -0.3 5,312,432 - -0.5 5,312,462 + -0.0 5,312,471 + +0.1 5,312,472 - +1.6 5,312,493 + +0.1 5,312,493 + +0.6 5,312,526 + -0.3 5,312,526 + -0.4 5,312,526 + +1.2 5,312,527 - -0.4 5,312,527 - -0.0 5,312,537 + -0.4 5,312,537 + -0.8 5,312,537 + -0.8 5,312,552 + -0.0 5,312,552 + -1.0 5,312,552 + -2.7 5,312,573 - +1.1 5,312,576 + +2.6 5,312,595 + +1.4 5,312,659 - +1.0 5,312,659 - +1.6 5,312,659 - +0.4 5,312,690 - -0.0 5,312,690 - -0.5 5,312,713 - +1.3 5,312,725 + +1.3 5,312,725 + -0.0 5,312,726 - -0.8 5,312,728 + -0.9 5,312,766 + +0.5 5,312,766 + -1.3 5,312,766 + +0.3 5,312,766 + +0.1 5,312,766 + -1.2 5,312,766 + +0.2 5,312,766 + -0.2 5,312,766 + +0.2 5,312,767 - -1.3 5,312,767 - +0.2 5,312,767 - -0.0 5,312,819 + AO353_24140 0.11 +1.3 5,312,820 - AO353_24140 0.11 +0.8 5,312,823 + AO353_24140 0.12 -0.0 5,312,823 + AO353_24140 0.12 -1.3 5,312,823 + AO353_24140 0.12 +1.0 5,312,823 + AO353_24140 0.12 -0.2 5,312,823 + AO353_24140 0.12 -0.8 5,312,823 + AO353_24140 0.12 +0.2 5,312,823 + AO353_24140 0.12 -0.2 5,312,823 + AO353_24140 0.12 -0.6 5,312,823 + AO353_24140 0.12 -0.9 5,312,824 - AO353_24140 0.12 +0.1 5,312,824 - AO353_24140 0.12 -0.4 5,312,824 - AO353_24140 0.12 -0.2 5,312,824 - AO353_24140 0.12 -0.2 5,312,824 - AO353_24140 0.12 +0.3 5,312,824 - AO353_24140 0.12 +0.4 5,312,856 + AO353_24140 0.19 +0.4 5,312,857 - AO353_24140 0.19 +1.0 5,312,862 - AO353_24140 0.20 -0.1 5,312,911 + AO353_24140 0.30 +1.0 5,312,911 + AO353_24140 0.30 -0.6 5,312,911 + AO353_24140 0.30 -0.2 5,312,911 + AO353_24140 0.30 -0.0 5,312,912 - AO353_24140 0.30 -1.2 5,312,912 - AO353_24140 0.30 -0.9 5,312,912 - AO353_24140 0.30 -2.4 5,312,912 - AO353_24140 0.30 +1.0 5,312,941 + AO353_24140 0.36 -0.0 5,312,941 + AO353_24140 0.36 -0.6 5,312,969 + AO353_24140 0.42 +1.0 5,312,969 + AO353_24140 0.42 -1.5 5,312,969 + AO353_24140 0.42 -0.1 5,312,970 - -0.4 5,313,020 + AO353_24140 0.53 -0.4 5,313,051 + AO353_24140 0.60 -0.2 5,313,075 + AO353_24140 0.65 +0.3 5,313,075 + AO353_24140 0.65 -0.4 5,313,075 + AO353_24140 0.65 +0.1 5,313,076 - AO353_24140 0.65 +1.2 5,313,076 - AO353_24140 0.65 +2.0 5,313,076 - AO353_24140 0.65 -0.1 5,313,078 + AO353_24140 0.65 -0.2 5,313,078 + AO353_24140 0.65 +0.2 5,313,079 - AO353_24140 0.65 -1.0 5,313,079 - AO353_24140 0.65 +1.0 5,313,099 + AO353_24140 0.70 +0.2 5,313,100 - AO353_24140 0.70 +1.0 5,313,100 - AO353_24140 0.70 -0.0 5,313,116 - AO353_24140 0.73 -0.4 5,313,216 - -0.2 5,313,216 - +1.4
Or see this region's nucleotide sequence