Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24115 and AO353_24120 overlap by 23 nucleotides AO353_24120 and AO353_24125 are separated by 660 nucleotides
AO353_24115: AO353_24115 - hypothetical protein, at 5,308,162 to 5,309,637
_24115
AO353_24120: AO353_24120 - hypothetical protein, at 5,309,615 to 5,309,854
_24120
AO353_24125: AO353_24125 - hypothetical protein, at 5,310,515 to 5,311,588
_24125
Position (kb)
5309
5310 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5308.696 kb on + strand, within AO353_24115 at 5308.696 kb on + strand, within AO353_24115 at 5308.697 kb on - strand, within AO353_24115 at 5308.697 kb on - strand, within AO353_24115 at 5308.841 kb on - strand, within AO353_24115 at 5308.841 kb on - strand, within AO353_24115 at 5308.898 kb on - strand, within AO353_24115 at 5308.963 kb on + strand, within AO353_24115 at 5308.963 kb on + strand, within AO353_24115 at 5308.963 kb on + strand, within AO353_24115 at 5308.963 kb on + strand, within AO353_24115 at 5308.963 kb on + strand, within AO353_24115 at 5308.963 kb on + strand, within AO353_24115 at 5308.964 kb on - strand, within AO353_24115 at 5308.964 kb on - strand, within AO353_24115 at 5308.964 kb on - strand, within AO353_24115 at 5308.964 kb on - strand, within AO353_24115 at 5308.964 kb on - strand, within AO353_24115 at 5309.016 kb on - strand, within AO353_24115 at 5309.165 kb on - strand, within AO353_24115 at 5309.165 kb on - strand, within AO353_24115 at 5309.165 kb on - strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.168 kb on + strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand, within AO353_24115 at 5309.169 kb on - strand at 5309.193 kb on + strand, within AO353_24115 at 5309.297 kb on + strand, within AO353_24115 at 5309.297 kb on + strand, within AO353_24115 at 5309.298 kb on - strand, within AO353_24115 at 5309.298 kb on - strand, within AO353_24115 at 5309.666 kb on + strand, within AO353_24120 at 5309.667 kb on - strand, within AO353_24120 at 5309.724 kb on - strand, within AO353_24120 at 5309.735 kb on + strand, within AO353_24120 at 5309.758 kb on + strand, within AO353_24120 at 5309.839 kb on + strand at 5309.839 kb on + strand at 5309.840 kb on - strand at 5309.853 kb on - strand at 5309.892 kb on - strand at 5309.892 kb on - strand at 5309.955 kb on - strand at 5309.985 kb on + strand at 5309.986 kb on - strand at 5310.059 kb on - strand at 5310.090 kb on + strand at 5310.090 kb on + strand at 5310.091 kb on - strand at 5310.091 kb on - strand at 5310.146 kb on - strand at 5310.167 kb on + strand at 5310.167 kb on + strand at 5310.192 kb on - strand at 5310.192 kb on - strand at 5310.194 kb on + strand at 5310.194 kb on + strand at 5310.195 kb on - strand at 5310.210 kb on + strand at 5310.211 kb on - strand at 5310.216 kb on + strand at 5310.364 kb on + strand at 5310.364 kb on + strand at 5310.408 kb on + strand at 5310.408 kb on + strand at 5310.408 kb on + strand at 5310.433 kb on + strand at 5310.433 kb on + strand at 5310.433 kb on + strand at 5310.434 kb on - strand at 5310.434 kb on - strand at 5310.438 kb on + strand at 5310.439 kb on - strand at 5310.439 kb on - strand at 5310.469 kb on + strand at 5310.470 kb on - strand at 5310.479 kb on - strand at 5310.496 kb on + strand at 5310.607 kb on + strand at 5310.608 kb on - strand at 5310.684 kb on + strand, within AO353_24125 at 5310.688 kb on + strand, within AO353_24125 at 5310.689 kb on - strand, within AO353_24125 at 5310.689 kb on - strand, within AO353_24125 at 5310.705 kb on + strand, within AO353_24125 at 5310.757 kb on + strand, within AO353_24125 at 5310.758 kb on - strand, within AO353_24125 at 5310.795 kb on + strand, within AO353_24125
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,308,696 + AO353_24115 0.36 -1.2 5,308,696 + AO353_24115 0.36 +0.5 5,308,697 - AO353_24115 0.36 +0.5 5,308,697 - AO353_24115 0.36 +1.2 5,308,841 - AO353_24115 0.46 -2.3 5,308,841 - AO353_24115 0.46 +0.4 5,308,898 - AO353_24115 0.50 -1.6 5,308,963 + AO353_24115 0.54 -0.8 5,308,963 + AO353_24115 0.54 +0.5 5,308,963 + AO353_24115 0.54 -1.6 5,308,963 + AO353_24115 0.54 +0.6 5,308,963 + AO353_24115 0.54 +0.4 5,308,963 + AO353_24115 0.54 -1.4 5,308,964 - AO353_24115 0.54 -0.0 5,308,964 - AO353_24115 0.54 +0.8 5,308,964 - AO353_24115 0.54 +0.2 5,308,964 - AO353_24115 0.54 +0.2 5,308,964 - AO353_24115 0.54 +1.6 5,309,016 - AO353_24115 0.58 +0.4 5,309,165 - AO353_24115 0.68 -1.6 5,309,165 - AO353_24115 0.68 -1.6 5,309,165 - AO353_24115 0.68 -0.3 5,309,168 + AO353_24115 0.68 -0.9 5,309,168 + AO353_24115 0.68 -1.3 5,309,168 + AO353_24115 0.68 +0.2 5,309,168 + AO353_24115 0.68 +0.3 5,309,168 + AO353_24115 0.68 -0.0 5,309,168 + AO353_24115 0.68 -1.8 5,309,168 + AO353_24115 0.68 -1.3 5,309,168 + AO353_24115 0.68 -1.0 5,309,168 + AO353_24115 0.68 -0.3 5,309,168 + AO353_24115 0.68 +0.8 5,309,168 + AO353_24115 0.68 +0.4 5,309,169 - AO353_24115 0.68 +0.6 5,309,169 - AO353_24115 0.68 +1.4 5,309,169 - AO353_24115 0.68 +0.6 5,309,169 - AO353_24115 0.68 -1.5 5,309,169 - AO353_24115 0.68 +2.6 5,309,169 - AO353_24115 0.68 +1.4 5,309,169 - AO353_24115 0.68 -1.3 5,309,169 - AO353_24115 0.68 -0.7 5,309,169 - AO353_24115 0.68 +1.0 5,309,169 - AO353_24115 0.68 +1.2 5,309,169 - AO353_24115 0.68 +2.3 5,309,169 - AO353_24115 0.68 -2.5 5,309,169 - AO353_24115 0.68 +0.4 5,309,169 - AO353_24115 0.68 +0.4 5,309,169 - +0.7 5,309,193 + AO353_24115 0.70 +0.4 5,309,297 + AO353_24115 0.77 -1.6 5,309,297 + AO353_24115 0.77 -1.2 5,309,298 - AO353_24115 0.77 -1.3 5,309,298 - AO353_24115 0.77 +0.4 5,309,666 + AO353_24120 0.21 +0.7 5,309,667 - AO353_24120 0.22 +0.2 5,309,724 - AO353_24120 0.45 +0.8 5,309,735 + AO353_24120 0.50 -1.3 5,309,758 + AO353_24120 0.60 +0.7 5,309,839 + +0.1 5,309,839 + +0.2 5,309,840 - +0.7 5,309,853 - +0.3 5,309,892 - +1.4 5,309,892 - -0.4 5,309,955 - +0.3 5,309,985 + +0.2 5,309,986 - -0.7 5,310,059 - -0.5 5,310,090 + +0.4 5,310,090 + -0.0 5,310,091 - -0.2 5,310,091 - +0.5 5,310,146 - -1.0 5,310,167 + -0.3 5,310,167 + -0.0 5,310,192 - -2.5 5,310,192 - +0.2 5,310,194 + -0.2 5,310,194 + -2.5 5,310,195 - -0.5 5,310,210 + +0.6 5,310,211 - -0.0 5,310,216 + +0.5 5,310,364 + +0.4 5,310,364 + -0.3 5,310,408 + -0.2 5,310,408 + +2.0 5,310,408 + +0.6 5,310,433 + +0.3 5,310,433 + -0.2 5,310,433 + +0.1 5,310,434 - +1.0 5,310,434 - -1.1 5,310,438 + -0.6 5,310,439 - +0.0 5,310,439 - +1.0 5,310,469 + -0.6 5,310,470 - +0.9 5,310,479 - +0.6 5,310,496 + -0.4 5,310,607 + -0.3 5,310,608 - +0.8 5,310,684 + AO353_24125 0.16 +1.3 5,310,688 + AO353_24125 0.16 -0.8 5,310,689 - AO353_24125 0.16 -0.6 5,310,689 - AO353_24125 0.16 -0.2 5,310,705 + AO353_24125 0.18 +0.6 5,310,757 + AO353_24125 0.23 +0.4 5,310,758 - AO353_24125 0.23 +0.1 5,310,795 + AO353_24125 0.26 -0.3
Or see this region's nucleotide sequence