Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24120

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_24115 and AO353_24120 overlap by 23 nucleotidesAO353_24120 and AO353_24125 are separated by 660 nucleotides AO353_24115: AO353_24115 - hypothetical protein, at 5,308,162 to 5,309,637 _24115 AO353_24120: AO353_24120 - hypothetical protein, at 5,309,615 to 5,309,854 _24120 AO353_24125: AO353_24125 - hypothetical protein, at 5,310,515 to 5,311,588 _24125 Position (kb) 5309 5310Strain fitness (log2 ratio) -2 -1 0 1 2at 5308.696 kb on + strand, within AO353_24115at 5308.696 kb on + strand, within AO353_24115at 5308.697 kb on - strand, within AO353_24115at 5308.697 kb on - strand, within AO353_24115at 5308.841 kb on - strand, within AO353_24115at 5308.841 kb on - strand, within AO353_24115at 5308.898 kb on - strand, within AO353_24115at 5308.963 kb on + strand, within AO353_24115at 5308.963 kb on + strand, within AO353_24115at 5308.963 kb on + strand, within AO353_24115at 5308.963 kb on + strand, within AO353_24115at 5308.963 kb on + strand, within AO353_24115at 5308.963 kb on + strand, within AO353_24115at 5308.964 kb on - strand, within AO353_24115at 5308.964 kb on - strand, within AO353_24115at 5308.964 kb on - strand, within AO353_24115at 5308.964 kb on - strand, within AO353_24115at 5308.964 kb on - strand, within AO353_24115at 5309.016 kb on - strand, within AO353_24115at 5309.165 kb on - strand, within AO353_24115at 5309.165 kb on - strand, within AO353_24115at 5309.165 kb on - strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.168 kb on + strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strand, within AO353_24115at 5309.169 kb on - strandat 5309.193 kb on + strand, within AO353_24115at 5309.297 kb on + strand, within AO353_24115at 5309.297 kb on + strand, within AO353_24115at 5309.298 kb on - strand, within AO353_24115at 5309.298 kb on - strand, within AO353_24115at 5309.666 kb on + strand, within AO353_24120at 5309.667 kb on - strand, within AO353_24120at 5309.724 kb on - strand, within AO353_24120at 5309.735 kb on + strand, within AO353_24120at 5309.758 kb on + strand, within AO353_24120at 5309.839 kb on + strandat 5309.839 kb on + strandat 5309.840 kb on - strandat 5309.853 kb on - strandat 5309.892 kb on - strandat 5309.892 kb on - strandat 5309.955 kb on - strandat 5309.985 kb on + strandat 5309.986 kb on - strandat 5310.059 kb on - strandat 5310.090 kb on + strandat 5310.090 kb on + strandat 5310.091 kb on - strandat 5310.091 kb on - strandat 5310.146 kb on - strandat 5310.167 kb on + strandat 5310.167 kb on + strandat 5310.192 kb on - strandat 5310.192 kb on - strandat 5310.194 kb on + strandat 5310.194 kb on + strandat 5310.195 kb on - strandat 5310.210 kb on + strandat 5310.211 kb on - strandat 5310.216 kb on + strandat 5310.364 kb on + strandat 5310.364 kb on + strandat 5310.408 kb on + strandat 5310.408 kb on + strandat 5310.408 kb on + strandat 5310.433 kb on + strandat 5310.433 kb on + strandat 5310.433 kb on + strandat 5310.434 kb on - strandat 5310.434 kb on - strandat 5310.438 kb on + strandat 5310.439 kb on - strandat 5310.439 kb on - strandat 5310.469 kb on + strandat 5310.470 kb on - strandat 5310.479 kb on - strandat 5310.496 kb on + strandat 5310.607 kb on + strandat 5310.608 kb on - strandat 5310.684 kb on + strand, within AO353_24125at 5310.688 kb on + strand, within AO353_24125at 5310.689 kb on - strand, within AO353_24125at 5310.689 kb on - strand, within AO353_24125at 5310.705 kb on + strand, within AO353_24125at 5310.757 kb on + strand, within AO353_24125at 5310.758 kb on - strand, within AO353_24125at 5310.795 kb on + strand, within AO353_24125

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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5,308,696 + AO353_24115 0.36 -1.2
5,308,696 + AO353_24115 0.36 +0.5
5,308,697 - AO353_24115 0.36 +0.5
5,308,697 - AO353_24115 0.36 +1.2
5,308,841 - AO353_24115 0.46 -2.3
5,308,841 - AO353_24115 0.46 +0.4
5,308,898 - AO353_24115 0.50 -1.6
5,308,963 + AO353_24115 0.54 -0.8
5,308,963 + AO353_24115 0.54 +0.5
5,308,963 + AO353_24115 0.54 -1.6
5,308,963 + AO353_24115 0.54 +0.6
5,308,963 + AO353_24115 0.54 +0.4
5,308,963 + AO353_24115 0.54 -1.4
5,308,964 - AO353_24115 0.54 -0.0
5,308,964 - AO353_24115 0.54 +0.8
5,308,964 - AO353_24115 0.54 +0.2
5,308,964 - AO353_24115 0.54 +0.2
5,308,964 - AO353_24115 0.54 +1.6
5,309,016 - AO353_24115 0.58 +0.4
5,309,165 - AO353_24115 0.68 -1.6
5,309,165 - AO353_24115 0.68 -1.6
5,309,165 - AO353_24115 0.68 -0.3
5,309,168 + AO353_24115 0.68 -0.9
5,309,168 + AO353_24115 0.68 -1.3
5,309,168 + AO353_24115 0.68 +0.2
5,309,168 + AO353_24115 0.68 +0.3
5,309,168 + AO353_24115 0.68 -0.0
5,309,168 + AO353_24115 0.68 -1.8
5,309,168 + AO353_24115 0.68 -1.3
5,309,168 + AO353_24115 0.68 -1.0
5,309,168 + AO353_24115 0.68 -0.3
5,309,168 + AO353_24115 0.68 +0.8
5,309,168 + AO353_24115 0.68 +0.4
5,309,169 - AO353_24115 0.68 +0.6
5,309,169 - AO353_24115 0.68 +1.4
5,309,169 - AO353_24115 0.68 +0.6
5,309,169 - AO353_24115 0.68 -1.5
5,309,169 - AO353_24115 0.68 +2.6
5,309,169 - AO353_24115 0.68 +1.4
5,309,169 - AO353_24115 0.68 -1.3
5,309,169 - AO353_24115 0.68 -0.7
5,309,169 - AO353_24115 0.68 +1.0
5,309,169 - AO353_24115 0.68 +1.2
5,309,169 - AO353_24115 0.68 +2.3
5,309,169 - AO353_24115 0.68 -2.5
5,309,169 - AO353_24115 0.68 +0.4
5,309,169 - AO353_24115 0.68 +0.4
5,309,169 - +0.7
5,309,193 + AO353_24115 0.70 +0.4
5,309,297 + AO353_24115 0.77 -1.6
5,309,297 + AO353_24115 0.77 -1.2
5,309,298 - AO353_24115 0.77 -1.3
5,309,298 - AO353_24115 0.77 +0.4
5,309,666 + AO353_24120 0.21 +0.7
5,309,667 - AO353_24120 0.22 +0.2
5,309,724 - AO353_24120 0.45 +0.8
5,309,735 + AO353_24120 0.50 -1.3
5,309,758 + AO353_24120 0.60 +0.7
5,309,839 + +0.1
5,309,839 + +0.2
5,309,840 - +0.7
5,309,853 - +0.3
5,309,892 - +1.4
5,309,892 - -0.4
5,309,955 - +0.3
5,309,985 + +0.2
5,309,986 - -0.7
5,310,059 - -0.5
5,310,090 + +0.4
5,310,090 + -0.0
5,310,091 - -0.2
5,310,091 - +0.5
5,310,146 - -1.0
5,310,167 + -0.3
5,310,167 + -0.0
5,310,192 - -2.5
5,310,192 - +0.2
5,310,194 + -0.2
5,310,194 + -2.5
5,310,195 - -0.5
5,310,210 + +0.6
5,310,211 - -0.0
5,310,216 + +0.5
5,310,364 + +0.4
5,310,364 + -0.3
5,310,408 + -0.2
5,310,408 + +2.0
5,310,408 + +0.6
5,310,433 + +0.3
5,310,433 + -0.2
5,310,433 + +0.1
5,310,434 - +1.0
5,310,434 - -1.1
5,310,438 + -0.6
5,310,439 - +0.0
5,310,439 - +1.0
5,310,469 + -0.6
5,310,470 - +0.9
5,310,479 - +0.6
5,310,496 + -0.4
5,310,607 + -0.3
5,310,608 - +0.8
5,310,684 + AO353_24125 0.16 +1.3
5,310,688 + AO353_24125 0.16 -0.8
5,310,689 - AO353_24125 0.16 -0.6
5,310,689 - AO353_24125 0.16 -0.2
5,310,705 + AO353_24125 0.18 +0.6
5,310,757 + AO353_24125 0.23 +0.4
5,310,758 - AO353_24125 0.23 +0.1
5,310,795 + AO353_24125 0.26 -0.3

Or see this region's nucleotide sequence