Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19560 and AO353_19565 are separated by 150 nucleotides AO353_19565 and AO353_19570 are separated by 10 nucleotides AO353_19570 and AO353_19575 are separated by 529 nucleotides
AO353_19560: AO353_19560 - ADP-ribosylglycohydrolase, at 4,286,636 to 4,287,559
_19560
AO353_19565: AO353_19565 - vanillate O-demethylase oxidoreductase VanB, at 4,287,710 to 4,288,168
_19565
AO353_19570: AO353_19570 - ArsR family transcriptional regulator, at 4,288,179 to 4,288,517
_19570
AO353_19575: AO353_19575 - dimethylglycine dehydrogenase, at 4,289,047 to 4,289,727
_19575
Position (kb)
4287
4288
4289 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4286.745 kb on - strand, within AO353_19560 at 4286.751 kb on + strand, within AO353_19560 at 4286.751 kb on + strand, within AO353_19560 at 4286.893 kb on - strand, within AO353_19560 at 4286.893 kb on - strand, within AO353_19560 at 4286.931 kb on + strand, within AO353_19560 at 4286.931 kb on + strand, within AO353_19560 at 4286.931 kb on + strand, within AO353_19560 at 4286.932 kb on - strand, within AO353_19560 at 4286.932 kb on - strand, within AO353_19560 at 4286.932 kb on - strand, within AO353_19560 at 4286.932 kb on - strand, within AO353_19560 at 4286.993 kb on + strand, within AO353_19560 at 4286.994 kb on - strand, within AO353_19560 at 4287.095 kb on - strand, within AO353_19560 at 4287.122 kb on + strand, within AO353_19560 at 4287.122 kb on + strand, within AO353_19560 at 4287.122 kb on + strand, within AO353_19560 at 4287.122 kb on + strand, within AO353_19560 at 4287.122 kb on + strand, within AO353_19560 at 4287.122 kb on + strand, within AO353_19560 at 4287.123 kb on - strand, within AO353_19560 at 4287.123 kb on - strand, within AO353_19560 at 4287.124 kb on + strand, within AO353_19560 at 4287.124 kb on + strand, within AO353_19560 at 4287.124 kb on + strand, within AO353_19560 at 4287.124 kb on + strand, within AO353_19560 at 4287.124 kb on + strand, within AO353_19560 at 4287.125 kb on - strand, within AO353_19560 at 4287.125 kb on - strand, within AO353_19560 at 4287.125 kb on - strand, within AO353_19560 at 4287.135 kb on + strand, within AO353_19560 at 4287.135 kb on + strand, within AO353_19560 at 4287.136 kb on - strand, within AO353_19560 at 4287.136 kb on - strand, within AO353_19560 at 4287.136 kb on - strand, within AO353_19560 at 4287.136 kb on - strand, within AO353_19560 at 4287.292 kb on - strand, within AO353_19560 at 4287.315 kb on + strand, within AO353_19560 at 4287.482 kb on + strand at 4287.482 kb on + strand at 4287.482 kb on + strand at 4287.482 kb on + strand at 4287.482 kb on + strand at 4287.482 kb on + strand at 4287.482 kb on + strand at 4287.483 kb on - strand at 4287.483 kb on - strand at 4287.483 kb on - strand at 4287.483 kb on - strand at 4287.483 kb on - strand at 4287.490 kb on + strand at 4287.550 kb on + strand at 4287.551 kb on - strand at 4287.551 kb on - strand at 4287.551 kb on - strand at 4287.597 kb on + strand at 4287.626 kb on + strand at 4287.626 kb on + strand at 4287.627 kb on - strand at 4287.627 kb on - strand at 4287.627 kb on - strand at 4287.627 kb on - strand at 4287.647 kb on + strand at 4287.647 kb on + strand at 4287.685 kb on + strand at 4287.686 kb on - strand at 4287.686 kb on - strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.709 kb on + strand at 4287.710 kb on - strand at 4287.710 kb on - strand at 4287.710 kb on - strand at 4287.710 kb on - strand at 4287.710 kb on - strand at 4287.710 kb on - strand at 4287.881 kb on + strand, within AO353_19565 at 4287.882 kb on - strand, within AO353_19565 at 4287.956 kb on + strand, within AO353_19565 at 4287.956 kb on + strand, within AO353_19565 at 4287.980 kb on + strand, within AO353_19565 at 4287.980 kb on + strand, within AO353_19565 at 4287.980 kb on + strand, within AO353_19565 at 4287.981 kb on - strand, within AO353_19565 at 4287.981 kb on - strand, within AO353_19565 at 4288.151 kb on + strand at 4288.151 kb on + strand at 4288.151 kb on + strand at 4288.152 kb on - strand at 4288.152 kb on - strand at 4288.152 kb on - strand at 4288.152 kb on - strand at 4288.152 kb on - strand at 4288.152 kb on - strand at 4288.199 kb on + strand at 4288.200 kb on - strand at 4288.530 kb on - strand at 4288.612 kb on + strand at 4288.612 kb on + strand at 4288.612 kb on + strand at 4288.613 kb on - strand at 4288.613 kb on - strand at 4288.622 kb on - strand at 4288.622 kb on - strand at 4288.624 kb on + strand at 4288.624 kb on + strand at 4288.624 kb on + strand at 4288.624 kb on + strand at 4288.624 kb on + strand at 4288.624 kb on + strand at 4288.625 kb on - strand at 4288.625 kb on - strand at 4288.625 kb on - strand at 4288.625 kb on - strand at 4288.625 kb on - strand at 4288.625 kb on - strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.628 kb on + strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.629 kb on - strand at 4288.660 kb on + strand at 4288.665 kb on + strand at 4288.665 kb on + strand at 4288.665 kb on + strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.666 kb on - strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.821 kb on + strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.822 kb on - strand at 4288.835 kb on + strand at 4288.835 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.851 kb on + strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.852 kb on - strand at 4288.883 kb on + strand at 4289.007 kb on - strand at 4289.017 kb on + strand at 4289.017 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,286,745 - AO353_19560 0.12 -0.6 4,286,751 + AO353_19560 0.12 -2.3 4,286,751 + AO353_19560 0.12 +1.3 4,286,893 - AO353_19560 0.28 +0.6 4,286,893 - AO353_19560 0.28 +0.1 4,286,931 + AO353_19560 0.32 -1.2 4,286,931 + AO353_19560 0.32 +0.2 4,286,931 + AO353_19560 0.32 +0.7 4,286,932 - AO353_19560 0.32 -0.8 4,286,932 - AO353_19560 0.32 -0.4 4,286,932 - AO353_19560 0.32 -0.3 4,286,932 - AO353_19560 0.32 -1.2 4,286,993 + AO353_19560 0.39 -0.7 4,286,994 - AO353_19560 0.39 -0.5 4,287,095 - AO353_19560 0.50 +3.3 4,287,122 + AO353_19560 0.53 -0.6 4,287,122 + AO353_19560 0.53 +0.1 4,287,122 + AO353_19560 0.53 +0.7 4,287,122 + AO353_19560 0.53 +0.2 4,287,122 + AO353_19560 0.53 -0.6 4,287,122 + AO353_19560 0.53 -0.2 4,287,123 - AO353_19560 0.53 -0.6 4,287,123 - AO353_19560 0.53 +0.1 4,287,124 + AO353_19560 0.53 -0.2 4,287,124 + AO353_19560 0.53 +0.7 4,287,124 + AO353_19560 0.53 +0.1 4,287,124 + AO353_19560 0.53 -0.4 4,287,124 + AO353_19560 0.53 -0.2 4,287,125 - AO353_19560 0.53 -1.0 4,287,125 - AO353_19560 0.53 -0.2 4,287,125 - AO353_19560 0.53 +0.1 4,287,135 + AO353_19560 0.54 +0.1 4,287,135 + AO353_19560 0.54 +0.9 4,287,136 - AO353_19560 0.54 -0.6 4,287,136 - AO353_19560 0.54 -2.0 4,287,136 - AO353_19560 0.54 +0.5 4,287,136 - AO353_19560 0.54 +0.1 4,287,292 - AO353_19560 0.71 +1.3 4,287,315 + AO353_19560 0.73 -0.4 4,287,482 + -1.0 4,287,482 + +0.9 4,287,482 + -0.6 4,287,482 + +0.2 4,287,482 + -0.1 4,287,482 + +0.3 4,287,482 + -1.4 4,287,483 - -0.8 4,287,483 - +0.4 4,287,483 - -0.2 4,287,483 - +1.3 4,287,483 - +1.3 4,287,490 + +1.3 4,287,550 + -0.4 4,287,551 - +0.5 4,287,551 - +0.1 4,287,551 - -0.9 4,287,597 + +0.1 4,287,626 + +1.0 4,287,626 + +0.3 4,287,627 - +0.7 4,287,627 - -0.7 4,287,627 - -1.1 4,287,627 - -1.5 4,287,647 + -1.2 4,287,647 + +2.3 4,287,685 + -0.9 4,287,686 - +0.3 4,287,686 - +0.7 4,287,709 + +0.3 4,287,709 + -0.8 4,287,709 + -0.2 4,287,709 + +0.6 4,287,709 + -1.1 4,287,709 + -0.6 4,287,709 + -0.2 4,287,709 + -0.4 4,287,710 - -0.5 4,287,710 - -0.6 4,287,710 - +0.3 4,287,710 - +0.4 4,287,710 - +2.3 4,287,710 - +0.2 4,287,881 + AO353_19565 0.37 +0.4 4,287,882 - AO353_19565 0.37 +0.6 4,287,956 + AO353_19565 0.54 +1.3 4,287,956 + AO353_19565 0.54 +0.7 4,287,980 + AO353_19565 0.59 +0.6 4,287,980 + AO353_19565 0.59 -0.6 4,287,980 + AO353_19565 0.59 -0.1 4,287,981 - AO353_19565 0.59 +1.3 4,287,981 - AO353_19565 0.59 +0.6 4,288,151 + -0.7 4,288,151 + -2.1 4,288,151 + -0.0 4,288,152 - -0.1 4,288,152 - -0.2 4,288,152 - -2.2 4,288,152 - -1.2 4,288,152 - +0.4 4,288,152 - -0.3 4,288,199 + +0.1 4,288,200 - -0.0 4,288,530 - -1.7 4,288,612 + +0.3 4,288,612 + +0.3 4,288,612 + -0.4 4,288,613 - +1.9 4,288,613 - -0.5 4,288,622 - +1.0 4,288,622 - -0.8 4,288,624 + +0.6 4,288,624 + +0.3 4,288,624 + -1.1 4,288,624 + -1.3 4,288,624 + +0.3 4,288,624 + -1.0 4,288,625 - -0.7 4,288,625 - -0.0 4,288,625 - +0.1 4,288,625 - +0.9 4,288,625 - -0.3 4,288,625 - +1.3 4,288,628 + +0.3 4,288,628 + +0.3 4,288,628 + +0.9 4,288,628 + +1.3 4,288,628 + +0.5 4,288,628 + +0.7 4,288,628 + -0.2 4,288,628 + -0.1 4,288,628 + -0.3 4,288,628 + +1.9 4,288,628 + -1.9 4,288,628 + -0.1 4,288,628 + +2.3 4,288,628 + -0.3 4,288,628 + -0.8 4,288,628 + +0.8 4,288,628 + +0.3 4,288,628 + -1.6 4,288,628 + +0.8 4,288,628 + +0.9 4,288,628 + +1.9 4,288,628 + -0.7 4,288,628 + -0.2 4,288,628 + -0.2 4,288,628 + -0.7 4,288,628 + -0.9 4,288,628 + -0.7 4,288,629 - -0.5 4,288,629 - -0.3 4,288,629 - -0.4 4,288,629 - +2.3 4,288,629 - +0.4 4,288,629 - -1.4 4,288,629 - +1.2 4,288,629 - -0.0 4,288,629 - +1.6 4,288,629 - +0.3 4,288,629 - -0.1 4,288,629 - -0.7 4,288,629 - -0.1 4,288,629 - -1.0 4,288,629 - +1.0 4,288,629 - +0.4 4,288,629 - +0.0 4,288,629 - -0.3 4,288,629 - +1.1 4,288,629 - +0.1 4,288,629 - -0.2 4,288,629 - +0.9 4,288,660 + -0.4 4,288,665 + -0.6 4,288,665 + +1.7 4,288,665 + +1.0 4,288,666 - -0.4 4,288,666 - -0.4 4,288,666 - +1.3 4,288,666 - +1.0 4,288,666 - -1.2 4,288,666 - -0.3 4,288,666 - -1.2 4,288,666 - -0.6 4,288,821 + +0.8 4,288,821 + -0.3 4,288,821 + -0.9 4,288,821 + -0.1 4,288,821 + -0.9 4,288,821 + -0.9 4,288,821 + +0.1 4,288,821 + +1.7 4,288,821 + -0.9 4,288,821 + +2.9 4,288,821 + +0.5 4,288,821 + +1.0 4,288,821 + -0.5 4,288,821 + +0.7 4,288,822 - -0.6 4,288,822 - -1.6 4,288,822 - -0.3 4,288,822 - -0.1 4,288,822 - -0.7 4,288,822 - -0.6 4,288,822 - +0.6 4,288,822 - -1.7 4,288,835 + +0.3 4,288,835 + +0.7 4,288,851 + +2.3 4,288,851 + +0.1 4,288,851 + -0.4 4,288,851 + +1.0 4,288,851 + -1.6 4,288,851 + +0.1 4,288,851 + +0.7 4,288,851 + -1.3 4,288,851 + +0.5 4,288,851 + -0.5 4,288,851 + +0.7 4,288,851 + +0.1 4,288,851 + +2.5 4,288,851 + +0.3 4,288,851 + -1.4 4,288,851 + -0.7 4,288,852 - -0.3 4,288,852 - +0.7 4,288,852 - +0.1 4,288,852 - -0.1 4,288,852 - -1.3 4,288,852 - +0.7 4,288,852 - -0.4 4,288,852 - +1.3 4,288,852 - +0.5 4,288,852 - +1.7 4,288,852 - +1.7 4,288,852 - -0.4 4,288,852 - -1.5 4,288,883 + -0.2 4,289,007 - +0.9 4,289,017 + -1.0 4,289,017 + +0.0
Or see this region's nucleotide sequence