Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12235

Experiment: L-Histidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (C)
2,689,222	+		AO353_12225	0.29	-0.2
2,689,222	+		AO353_12225	0.29	+0.5
2,689,223	-		AO353_12225	0.30	+0.6
2,689,223	-		AO353_12225	0.30	-1.4
2,689,276	-		AO353_12225	0.51	-0.7
2,689,317	+		AO353_12225	0.67	-0.0
2,689,318	-		AO353_12225	0.67	-0.9
2,689,318	-		AO353_12225	0.67	-1.5
2,689,341	+		AO353_12225	0.76	+1.1
2,689,342	-		AO353_12225	0.76	-1.0
2,689,342	-		AO353_12225	0.76	-0.5
2,689,399	+				+0.1
2,689,400	-				-0.9
2,689,400	-				-0.6
2,689,400	-				+0.3
2,689,431	+				-1.2
2,689,431	+				-0.2
2,689,431	+				-0.6
2,689,432	-				-0.3
2,689,446	+				-0.5
2,689,446	+				-0.5
2,689,449	+				-0.4
2,689,449	+				+0.4
2,689,449	+				+1.0
2,689,449	+				+1.0
2,689,449	+				-1.0
2,689,449	+				-0.6
2,689,449	+				-0.9
2,689,449	+				+0.7
2,689,449	+				-2.0
2,689,449	+				+0.5
2,689,449	+				+0.7
2,689,449	+				+0.2
2,689,449	+				-1.4
2,689,449	+				+0.2
2,689,450	-				-1.1
2,689,526	-		AO353_12230	0.16	+0.5
2,689,544	+		AO353_12230	0.19	-0.7
2,689,552	+		AO353_12230	0.21	-0.4
2,689,552	+		AO353_12230	0.21	-1.3
2,689,552	+		AO353_12230	0.21	+0.2
2,689,553	-		AO353_12230	0.21	-1.9
2,689,553	-		AO353_12230	0.21	-0.4
2,689,553	-		AO353_12230	0.21	+0.1
2,689,553	-		AO353_12230	0.21	-0.2
2,689,560	-		AO353_12230	0.22	-1.2
2,689,583	+		AO353_12230	0.26	-0.5
2,689,583	+		AO353_12230	0.26	-0.4
2,689,583	+		AO353_12230	0.26	+0.4
2,689,583	+		AO353_12230	0.26	-0.7
2,689,584	-		AO353_12230	0.26	+1.2
2,689,584	-		AO353_12230	0.26	-0.3
2,689,594	+		AO353_12230	0.28	+1.0
2,689,594	+		AO353_12230	0.28	+0.2
2,689,594	+		AO353_12230	0.28	-1.2
2,689,595	-		AO353_12230	0.28	+0.0
2,689,619	+		AO353_12230	0.33	-1.0
2,689,619	+		AO353_12230	0.33	+0.7
2,689,619	+		AO353_12230	0.33	+0.5
2,689,619	+		AO353_12230	0.33	-0.8
2,689,620	-		AO353_12230	0.33	+1.0
2,689,620	-		AO353_12230	0.33	+0.3
2,689,620	-		AO353_12230	0.33	+0.7
2,689,620	-		AO353_12230	0.33	-0.6
2,689,620	-		AO353_12230	0.33	+0.4
2,689,620	-		AO353_12230	0.33	-0.5
2,689,620	-		AO353_12230	0.33	+1.1
2,689,620	-		AO353_12230	0.33	-0.7
2,689,792	+		AO353_12230	0.63	-0.4
2,689,792	+		AO353_12230	0.63	-0.4
2,689,793	-		AO353_12230	0.63	+0.1
2,689,793	-		AO353_12230	0.63	+0.1
2,689,793	-		AO353_12230	0.63	+1.1
2,689,793	-		AO353_12230	0.63	-0.9
2,689,793	-		AO353_12230	0.63	+1.1
2,689,796	+		AO353_12230	0.64	-0.6
2,689,797	-		AO353_12230	0.64	+0.8
2,689,797	-		AO353_12230	0.64	-0.9
2,689,797	-		AO353_12230	0.64	+0.4
2,689,797	-		AO353_12230	0.64	+0.4
2,689,797	-		AO353_12230	0.64	-1.0
2,689,808	+		AO353_12230	0.66	-0.6
2,689,808	+		AO353_12230	0.66	-0.4
2,689,808	+		AO353_12230	0.66	-1.1
2,689,808	+		AO353_12230	0.66	-0.5
2,689,808	+		AO353_12230	0.66	+0.2
2,689,808	+		AO353_12230	0.66	+0.4
2,689,808	+		AO353_12230	0.66	-0.0
2,689,808	+		AO353_12230	0.66	-0.6
2,689,808	+		AO353_12230	0.66	-0.4
2,689,808	+		AO353_12230	0.66	-1.1
2,689,809	-		AO353_12230	0.66	-0.5
2,689,809	-		AO353_12230	0.66	-0.2
2,689,809	-		AO353_12230	0.66	+0.1
2,689,809	-		AO353_12230	0.66	+1.4
2,689,809	-		AO353_12230	0.66	-0.4
2,689,809	-		AO353_12230	0.66	+0.5
2,689,809	-		AO353_12230	0.66	+0.3
2,689,809	-		AO353_12230	0.66	+0.1
2,689,809	-		AO353_12230	0.66	-0.0
2,689,809	-		AO353_12230	0.66	-0.7
2,689,809	-		AO353_12230	0.66	-0.4
2,689,809	-		AO353_12230	0.66	-1.0
2,689,809	-		AO353_12230	0.66	+0.4
2,689,809	-		AO353_12230	0.66	-1.7
2,689,823	+		AO353_12230	0.68	-0.5
2,689,823	+		AO353_12230	0.68	+0.5
2,689,824	-		AO353_12230	0.69	-2.5
2,689,940	+		AO353_12230	0.89	+0.4
2,689,941	-		AO353_12230	0.89	+2.0
2,689,941	-		AO353_12230	0.89	-0.1
2,690,000	+				+1.0
2,690,000	+				+1.2
2,690,001	-				-2.1
2,690,001	-				+1.3
2,690,001	-				-0.6
2,690,184	+				-1.3
2,690,184	+				-2.0
2,690,184	+				-2.4
2,690,184	+				-1.2
2,690,185	-				-0.9
2,690,185	-				-1.7
2,690,185	-				-2.4
2,690,185	-				-1.0
2,690,238	+				+0.4
2,690,239	-				-0.0
2,690,338	+		AO353_12235	0.13	-2.7
2,690,338	+		AO353_12235	0.13	-1.9
2,690,339	-		AO353_12235	0.13	-3.7
2,690,339	-		AO353_12235	0.13	-1.5
2,690,443	+		AO353_12235	0.21	-2.9
2,690,443	+		AO353_12235	0.21	-0.5
2,690,479	+		AO353_12235	0.23	-2.4
2,690,479	+		AO353_12235	0.23	-1.0
2,690,479	+		AO353_12235	0.23	-2.0
2,690,479	+		AO353_12235	0.23	-2.7
2,690,480	-		AO353_12235	0.23	-1.5
2,690,480	-		AO353_12235	0.23	-3.5
2,690,480	-		AO353_12235	0.23	-0.6
2,690,480	-		AO353_12235	0.23	+1.0
2,690,490	-		AO353_12235	0.24	-0.6
2,690,490	-		AO353_12235	0.24	-2.0
2,690,636	+		AO353_12235	0.35	-0.9
2,690,637	-		AO353_12235	0.35	-2.9
2,690,750	+		AO353_12235	0.43	+1.0
2,690,751	-		AO353_12235	0.43	-2.8
2,690,751	-		AO353_12235	0.43	-4.2
2,690,758	+		AO353_12235	0.44	-2.1
2,690,758	+		AO353_12235	0.44	+0.6
2,690,759	-		AO353_12235	0.44	-2.1
2,690,759	-		AO353_12235	0.44	-0.4
2,690,970	+		AO353_12235	0.59	-2.3
2,690,970	+		AO353_12235	0.59	-1.4
2,690,970	+		AO353_12235	0.59	-2.4
2,690,970	+		AO353_12235	0.59	-1.2
2,690,970	+		AO353_12235	0.59	-0.9
2,690,971	-		AO353_12235	0.59	-3.2
2,690,971	-		AO353_12235	0.59	-3.5
2,690,971	-		AO353_12235	0.59	-2.0
2,690,971	-		AO353_12235	0.59	-3.3
2,690,980	+		AO353_12235	0.60	-0.6
2,690,980	+		AO353_12235	0.60	-2.3
2,690,981	-		AO353_12235	0.60	-1.9
2,691,052	+		AO353_12235	0.65	-1.5
2,691,052	+		AO353_12235	0.65	-2.2
2,691,052	+		AO353_12235	0.65	-1.0
2,691,052	+		AO353_12235	0.65	+0.4
2,691,053	-		AO353_12235	0.65	-3.4
2,691,053	-		AO353_12235	0.65	-0.6
2,691,053	-		AO353_12235	0.65	-3.7
2,691,053	-		AO353_12235	0.65	-2.7
2,691,053	-		AO353_12235	0.65	-2.2
2,691,053	-		AO353_12235	0.65	-0.9
2,691,053	-		AO353_12235	0.65	-3.1
2,691,053	-		AO353_12235	0.65	-1.2
2,691,053	-		AO353_12235	0.65	-2.7
2,691,053	-		AO353_12235	0.65	-3.1
2,691,057	+		AO353_12235	0.65	-0.9
2,691,057	+		AO353_12235	0.65	-2.6
2,691,057	+		AO353_12235	0.65	+0.4
2,691,057	+		AO353_12235	0.65	-0.0
2,691,057	+		AO353_12235	0.65	-2.3
2,691,058	-		AO353_12235	0.66	-0.9
2,691,058	-		AO353_12235	0.66	-2.8
2,691,058	-		AO353_12235	0.66	-2.4
2,691,058	-		AO353_12235	0.66	-1.0
2,691,058	-		AO353_12235	0.66	-1.0
2,691,058	-		AO353_12235	0.66	-2.8
2,691,136	+		AO353_12235	0.71	+0.1
2,691,166	+		AO353_12235	0.73	-2.1
2,691,167	-		AO353_12235	0.74	-1.2
2,691,167	-		AO353_12235	0.74	-3.1
2,691,167	-		AO353_12235	0.74	-2.4
2,691,214	+		AO353_12235	0.77	-0.4
2,691,214	+		AO353_12235	0.77	-3.7
2,691,214	+		AO353_12235	0.77	-3.4
2,691,214	+		AO353_12235	0.77	-0.4
2,691,214	+		AO353_12235	0.77	+1.0
2,691,215	-		AO353_12235	0.77	-3.2
2,691,215	-		AO353_12235	0.77	-2.7
2,691,215	-		AO353_12235	0.77	-0.6
2,691,215	-		AO353_12235	0.77	-1.7
2,691,215	-		AO353_12235	0.77	-3.0
2,691,271	+		AO353_12235	0.81	-0.9
2,691,272	-		AO353_12235	0.81	-2.9
2,691,272	-		AO353_12235	0.81	-2.9
2,691,319	-		AO353_12235	0.85	-1.9
2,691,471	+				-3.7
2,691,471	+				-1.0
2,691,471	+				-2.0
2,691,471	+				-2.4
2,691,471	+				-1.5
2,691,471	+				-1.0
2,691,472	-				-3.7
2,691,472	-				-1.7
2,691,472	-				-2.0
2,691,472	-				-1.6
2,691,472	-				-2.4
2,691,472	-				-1.7
2,691,472	-				-2.2
2,691,472	-				-2.2
2,691,472	-				-1.6
2,691,472	-				+2.0
2,691,472	-				-3.0
2,691,472	-				-0.9
2,691,492	-				-3.0
2,691,550	+				-3.6
2,691,556	+				+0.1
2,691,557	-				+0.1
2,691,557	-				-1.0
2,691,557	-				+0.5
2,691,559	-				-0.6
2,691,560	+				+3.0
2,691,560	+				-3.1
2,691,560	+				-3.7
2,691,560	+				-2.1
2,691,560	+				-2.4
2,691,560	+				-3.1
2,691,560	+				-2.9
2,691,560	+				-3.0
2,691,560	+				-1.4
2,691,560	+				-2.4
2,691,561	-				-1.3
2,691,561	-				+0.4
2,691,561	-				-0.9
2,691,561	-				+0.6
2,691,561	-				+0.1
2,691,561	-				-2.0
2,691,564	+				-0.9
2,691,564	+				-2.6
2,691,565	-				-2.0
2,691,565	-				-1.5
2,691,565	-				-1.9
2,691,565	-				-2.2
2,691,567	-				-0.6
2,691,602	+				-1.5
2,691,602	+				-1.9
2,691,603	-				-1.2
2,691,650	+				-0.0
2,691,650	+				-0.6
2,691,650	+				-0.4
2,691,651	-				-1.2
2,691,651	-				-1.4
2,691,651	-				-0.4
2,691,697	+				+0.1
2,691,697	+				+1.0
2,691,697	+				+0.6
2,691,697	+				-1.2
2,691,697	+				-0.6
2,691,698	-				-2.1
2,691,698	-				-1.2
2,691,698	-				-0.9
2,691,698	-				-1.0
2,691,698	-				+0.7
2,691,698	-				-0.6
2,691,698	-				+0.4
2,691,698	-				-1.0
2,691,698	-				-1.2
2,691,757	+		AO353_12240	0.16	-0.0
2,691,758	-		AO353_12240	0.17	-0.9
2,691,924	+		AO353_12240	0.39	+0.8
2,691,925	-		AO353_12240	0.39	-1.6
2,691,925	-		AO353_12240	0.39	-1.6
2,691,925	-		AO353_12240	0.39	-2.7
2,691,978	+		AO353_12240	0.46	+1.1
2,691,978	+		AO353_12240	0.46	+2.4
2,691,978	+		AO353_12240	0.46	+0.6
2,691,978	+		AO353_12240	0.46	+2.0
2,691,978	+		AO353_12240	0.46	+1.8
2,691,978	+		AO353_12240	0.46	+1.9
2,691,978	+		AO353_12240	0.46	+2.1
2,691,978	+		AO353_12240	0.46	+2.1
2,691,979	-		AO353_12240	0.46	-0.6
2,691,979	-		AO353_12240	0.46	-1.4
2,691,979	-		AO353_12240	0.46	-0.4
2,692,133	-		AO353_12240	0.67	-1.0
2,692,165	+		AO353_12240	0.71	+1.5
2,692,166	-		AO353_12240	0.71	-0.0
2,692,166	-		AO353_12240	0.71	-1.4
2,692,171	+		AO353_12240	0.72	+1.7
2,692,171	+		AO353_12240	0.72	-0.0
2,692,171	+		AO353_12240	0.72	+2.4
2,692,171	+		AO353_12240	0.72	+1.3
2,692,172	-		AO353_12240	0.72	-2.6
2,692,381	+				-1.0
2,692,381	+				-0.6
2,692,381	+				-0.6
2,692,381	+				+1.4
2,692,381	+				-1.1
2,692,382	-				-1.6
2,692,382	-				-1.9
2,692,382	-				-2.8
2,692,382	-				-2.9
2,692,382	-				-0.9
2,692,382	-				-2.0
2,692,382	-				-1.7
2,692,395	+				-0.0
2,692,395	+				-1.2
2,692,396	-				-1.9
2,692,396	-				-1.4
2,692,396	-				-2.2
2,692,405	+				-3.4
2,692,405	+				-3.3
2,692,405	+				-2.5
2,692,405	+				-0.0
2,692,405	+				-0.4
2,692,405	+				-2.0
2,692,405	+				-2.9
2,692,405	+				-1.6
2,692,405	+				-1.9
2,692,405	+				-1.2
2,692,405	+				-0.4
2,692,405	+				-2.0
2,692,405	+				-2.0
2,692,405	+				-1.1
2,692,405	+				-1.2
2,692,406	-				-1.7
2,692,406	-				-1.0
2,692,406	-				-0.0
2,692,406	-				-2.6
2,692,406	-				-1.5
2,692,406	-				-2.4
2,692,406	-				-2.3
2,692,406	-				-1.7
2,692,406	-				-2.7
2,692,406	-				-0.9
2,692,406	-				-2.2
2,692,406	-				-2.6
2,692,406	-				-2.0
2,692,406	-				-1.7
2,692,406	-				-2.5
2,692,406	-				-0.6
2,692,406	-				-2.6
2,692,406	-				-1.5
2,692,406	-				-0.4
2,692,406	-				-1.6
2,692,406	-				+0.4
2,692,406	-				-2.0
2,692,406	-				-1.0
2,692,406	-				-0.9
2,692,406	-				-2.1
2,692,441	+				-2.4
2,692,442	-				-2.8
2,692,442	-				-1.6