Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03255 and AO353_03260 are separated by 306 nucleotides AO353_03260 and AO353_03265 are separated by 170 nucleotides
AO353_03255: AO353_03255 - LacI family transcriptional regulator, at 693,032 to 694,063
_03255
AO353_03260: AO353_03260 - epimerase, at 694,370 to 695,113
_03260
AO353_03265: AO353_03265 - siderophore synthetase, at 695,284 to 697,194
_03265
Position (kb) 694
695
696 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.414 kb on - strand, within AO353_03255 at 693.487 kb on + strand, within AO353_03255 at 693.488 kb on - strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.615 kb on - strand, within AO353_03255 at 693.615 kb on - strand, within AO353_03255 at 693.693 kb on - strand, within AO353_03255 at 693.753 kb on + strand, within AO353_03255 at 693.753 kb on + strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 694.027 kb on + strand at 694.042 kb on - strand at 694.057 kb on + strand at 694.057 kb on + strand at 694.058 kb on - strand at 694.058 kb on - strand at 694.058 kb on - strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.077 kb on - strand at 694.077 kb on - strand at 694.077 kb on - strand at 694.077 kb on - strand at 694.297 kb on + strand at 694.297 kb on + strand at 694.298 kb on - strand at 694.298 kb on - strand at 694.301 kb on + strand at 694.301 kb on + strand at 694.301 kb on + strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.329 kb on + strand at 694.329 kb on + strand at 694.329 kb on + strand at 694.330 kb on - strand at 694.330 kb on - strand at 694.330 kb on - strand at 694.386 kb on + strand at 694.386 kb on + strand at 694.386 kb on + strand at 694.387 kb on - strand at 694.387 kb on - strand at 694.387 kb on - strand at 694.448 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.778 kb on + strand, within AO353_03260 at 694.778 kb on + strand, within AO353_03260 at 694.779 kb on - strand, within AO353_03260 at 694.779 kb on - strand, within AO353_03260 at 694.797 kb on - strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.948 kb on - strand, within AO353_03260 at 694.948 kb on - strand, within AO353_03260 at 694.948 kb on - strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.983 kb on - strand, within AO353_03260 at 695.057 kb on + strand at 695.057 kb on + strand at 695.057 kb on + strand at 695.057 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.115 kb on + strand at 695.116 kb on - strand at 695.116 kb on - strand at 695.116 kb on - strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.316 kb on - strand at 695.391 kb on + strand at 695.392 kb on - strand at 695.392 kb on - strand at 695.392 kb on - strand at 695.430 kb on - strand at 695.502 kb on + strand, within AO353_03265 at 695.502 kb on + strand, within AO353_03265 at 695.503 kb on - strand, within AO353_03265 at 695.503 kb on - strand, within AO353_03265 at 695.503 kb on - strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.571 kb on - strand, within AO353_03265 at 695.571 kb on - strand, within AO353_03265 at 695.639 kb on + strand, within AO353_03265 at 695.696 kb on + strand, within AO353_03265 at 695.802 kb on + strand, within AO353_03265 at 695.803 kb on - strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.943 kb on - strand, within AO353_03265 at 696.095 kb on + strand at 696.096 kb on - strand, within AO353_03265
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 693,404 + AO353_03255 0.36 -0.2 693,404 + AO353_03255 0.36 +0.0 693,404 + AO353_03255 0.36 +0.0 693,404 + AO353_03255 0.36 -0.3 693,404 + AO353_03255 0.36 +0.8 693,404 + AO353_03255 0.36 -0.6 693,404 + AO353_03255 0.36 -1.5 693,405 - AO353_03255 0.36 -0.1 693,405 - AO353_03255 0.36 +0.1 693,405 - AO353_03255 0.36 +0.1 693,405 - AO353_03255 0.36 +1.5 693,405 - AO353_03255 0.36 +0.8 693,405 - AO353_03255 0.36 -0.1 693,405 - AO353_03255 0.36 +1.1 693,405 - AO353_03255 0.36 -0.5 693,405 - AO353_03255 0.36 +1.0 693,405 - AO353_03255 0.36 -0.1 693,405 - AO353_03255 0.36 -0.5 693,405 - AO353_03255 0.36 +0.2 693,414 - AO353_03255 0.37 -0.1 693,487 + AO353_03255 0.44 -0.1 693,488 - AO353_03255 0.44 +0.3 693,500 + AO353_03255 0.45 +0.6 693,500 + AO353_03255 0.45 -0.8 693,500 + AO353_03255 0.45 +1.3 693,500 + AO353_03255 0.45 -0.3 693,500 + AO353_03255 0.45 -0.5 693,501 - AO353_03255 0.45 -0.4 693,501 - AO353_03255 0.45 +0.4 693,501 - AO353_03255 0.45 +0.1 693,501 - AO353_03255 0.45 +1.5 693,501 - AO353_03255 0.45 -0.3 693,501 - AO353_03255 0.45 +0.7 693,501 - AO353_03255 0.45 +0.1 693,501 - AO353_03255 0.45 +1.2 693,501 - AO353_03255 0.45 -1.5 693,614 + AO353_03255 0.56 -0.8 693,614 + AO353_03255 0.56 -0.6 693,614 + AO353_03255 0.56 +0.7 693,614 + AO353_03255 0.56 -1.5 693,615 - AO353_03255 0.56 -3.0 693,615 - AO353_03255 0.56 +0.6 693,693 - AO353_03255 0.64 -0.8 693,753 + AO353_03255 0.70 +0.6 693,753 + AO353_03255 0.70 -0.8 693,754 - AO353_03255 0.70 +0.3 693,754 - AO353_03255 0.70 -1.1 693,754 - AO353_03255 0.70 +0.5 693,754 - AO353_03255 0.70 -0.5 694,027 + -0.1 694,042 - -0.1 694,057 + -0.6 694,057 + +0.2 694,058 - +0.0 694,058 - -0.3 694,058 - +1.5 694,076 + -0.8 694,076 + -0.3 694,076 + -0.6 694,076 + -1.3 694,076 + -0.1 694,076 + -0.6 694,077 - -1.1 694,077 - +0.1 694,077 - +1.2 694,077 - +0.4 694,297 + -1.1 694,297 + +0.3 694,298 - -0.8 694,298 - -0.2 694,301 + +1.1 694,301 + -0.7 694,301 + +0.5 694,302 - +0.2 694,302 - +0.2 694,302 - +1.1 694,302 - -0.8 694,302 - -0.5 694,302 - -0.8 694,302 - -0.9 694,302 - -0.2 694,302 - -1.5 694,302 - -1.3 694,302 - +1.1 694,302 - -1.0 694,329 + -0.0 694,329 + +0.3 694,329 + -0.2 694,330 - +0.2 694,330 - -0.9 694,330 - -2.2 694,386 + +1.1 694,386 + +0.9 694,386 + +1.9 694,387 - -0.6 694,387 - +0.5 694,387 - -1.0 694,448 + AO353_03260 0.10 +0.5 694,649 + AO353_03260 0.38 +1.0 694,649 + AO353_03260 0.38 -1.4 694,649 + AO353_03260 0.38 +0.4 694,649 + AO353_03260 0.38 +0.2 694,649 + AO353_03260 0.38 +0.2 694,649 + AO353_03260 0.38 -0.0 694,649 + AO353_03260 0.38 +0.9 694,649 + AO353_03260 0.38 +1.7 694,650 - AO353_03260 0.38 +0.9 694,650 - AO353_03260 0.38 -0.1 694,650 - AO353_03260 0.38 +0.3 694,650 - AO353_03260 0.38 -0.2 694,650 - AO353_03260 0.38 +0.1 694,778 + AO353_03260 0.55 +0.1 694,778 + AO353_03260 0.55 +1.0 694,779 - AO353_03260 0.55 +1.7 694,779 - AO353_03260 0.55 +1.9 694,797 - AO353_03260 0.57 +0.5 694,820 + AO353_03260 0.60 -0.8 694,820 + AO353_03260 0.60 +0.3 694,820 + AO353_03260 0.60 -0.1 694,820 + AO353_03260 0.60 -0.1 694,948 - AO353_03260 0.78 +0.0 694,948 - AO353_03260 0.78 +0.9 694,948 - AO353_03260 0.78 +0.8 694,982 + AO353_03260 0.82 -0.4 694,982 + AO353_03260 0.82 -0.3 694,982 + AO353_03260 0.82 +0.1 694,982 + AO353_03260 0.82 -0.2 694,983 - AO353_03260 0.82 +1.5 695,057 + -1.0 695,057 + +1.0 695,057 + -0.4 695,057 + -0.1 695,067 + -0.7 695,067 + +0.7 695,067 + +0.9 695,067 + -0.5 695,067 + +1.1 695,067 + -0.2 695,068 - +0.2 695,068 - -1.3 695,068 - +1.5 695,068 - +1.4 695,068 - +1.2 695,068 - -0.8 695,115 + +0.6 695,116 - -1.0 695,116 - +0.2 695,116 - -0.7 695,278 + -0.4 695,278 + -1.5 695,278 + +0.9 695,278 + -0.1 695,278 + +0.3 695,278 + +0.2 695,278 + -0.2 695,278 + -0.3 695,278 + +0.2 695,278 + -1.8 695,278 + -0.3 695,278 + -0.6 695,278 + -0.1 695,279 - +1.1 695,279 - +0.1 695,279 - -1.1 695,279 - +0.5 695,279 - +0.8 695,279 - -2.5 695,316 - +1.8 695,391 + +1.9 695,392 - +1.1 695,392 - +1.5 695,392 - -1.0 695,430 - +1.0 695,502 + AO353_03265 0.11 -0.5 695,502 + AO353_03265 0.11 -1.1 695,503 - AO353_03265 0.11 +1.0 695,503 - AO353_03265 0.11 -0.1 695,503 - AO353_03265 0.11 -1.1 695,570 + AO353_03265 0.15 -1.5 695,570 + AO353_03265 0.15 -0.4 695,570 + AO353_03265 0.15 +0.2 695,570 + AO353_03265 0.15 +0.1 695,571 - AO353_03265 0.15 +0.0 695,571 - AO353_03265 0.15 +0.1 695,639 + AO353_03265 0.19 -0.5 695,696 + AO353_03265 0.22 +0.5 695,802 + AO353_03265 0.27 +0.6 695,803 - AO353_03265 0.27 +0.4 695,899 + AO353_03265 0.32 +0.1 695,899 + AO353_03265 0.32 +1.1 695,899 + AO353_03265 0.32 -0.0 695,899 + AO353_03265 0.32 +1.5 695,900 - AO353_03265 0.32 +0.2 695,900 - AO353_03265 0.32 +2.0 695,900 - AO353_03265 0.32 -0.3 695,900 - AO353_03265 0.32 -0.4 695,943 - AO353_03265 0.34 -0.5 696,095 + +0.7 696,096 - AO353_03265 0.42 +0.8
Or see this region's nucleotide sequence