Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02645 and AO353_02650 are separated by 27 nucleotides AO353_02650 and AO353_02655 are separated by 15 nucleotides AO353_02655 and AO353_02660 are separated by 165 nucleotides
AO353_02645: AO353_02645 - hypothetical protein, at 563,768 to 564,352
_02645
AO353_02650: AO353_02650 - SAM-dependent methyltransferase, at 564,380 to 565,042
_02650
AO353_02655: AO353_02655 - peptidase P60, at 565,058 to 565,591
_02655
AO353_02660: AO353_02660 - peptidase P60, at 565,757 to 566,380
_02660
Position (kb) 565
566 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 564.134 kb on + strand, within AO353_02645 at 564.134 kb on + strand, within AO353_02645 at 564.197 kb on - strand, within AO353_02645 at 564.264 kb on - strand, within AO353_02645 at 564.278 kb on + strand, within AO353_02645 at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.365 kb on + strand at 564.365 kb on + strand at 564.366 kb on - strand at 564.382 kb on - strand at 564.464 kb on - strand, within AO353_02650 at 564.512 kb on + strand, within AO353_02650 at 564.513 kb on - strand, within AO353_02650 at 564.543 kb on - strand, within AO353_02650 at 564.588 kb on + strand, within AO353_02650 at 564.589 kb on - strand, within AO353_02650 at 564.589 kb on - strand, within AO353_02650 at 564.589 kb on - strand, within AO353_02650 at 564.753 kb on + strand, within AO353_02650 at 564.753 kb on + strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.005 kb on + strand at 565.006 kb on - strand at 565.006 kb on - strand at 565.059 kb on + strand at 565.059 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.111 kb on - strand at 565.111 kb on - strand at 565.125 kb on + strand, within AO353_02655 at 565.126 kb on - strand, within AO353_02655 at 565.126 kb on - strand, within AO353_02655 at 565.157 kb on - strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.265 kb on + strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.333 kb on + strand, within AO353_02655 at 565.333 kb on + strand, within AO353_02655 at 565.357 kb on - strand, within AO353_02655 at 565.357 kb on - strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.396 kb on + strand, within AO353_02655 at 565.397 kb on - strand, within AO353_02655 at 565.413 kb on + strand, within AO353_02655 at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.568 kb on + strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.569 kb on - strand at 565.591 kb on + strand at 565.591 kb on + strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.592 kb on - strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.593 kb on + strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.594 kb on - strand at 565.665 kb on - strand at 565.672 kb on + strand at 565.676 kb on + strand at 565.677 kb on - strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.686 kb on + strand at 565.724 kb on + strand at 565.732 kb on + strand at 565.738 kb on + strand at 565.738 kb on - strand at 565.831 kb on - strand, within AO353_02660 at 565.831 kb on - strand, within AO353_02660 at 565.847 kb on - strand, within AO353_02660 at 565.908 kb on + strand, within AO353_02660 at 565.908 kb on + strand, within AO353_02660 at 565.909 kb on - strand, within AO353_02660 at 566.067 kb on + strand, within AO353_02660 at 566.185 kb on - strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.241 kb on + strand, within AO353_02660 at 566.242 kb on - strand, within AO353_02660 at 566.246 kb on - strand, within AO353_02660 at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.375 kb on + strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.376 kb on - strand at 566.404 kb on + strand at 566.404 kb on + strand at 566.419 kb on + strand at 566.419 kb on + strand at 566.419 kb on + strand at 566.420 kb on - strand at 566.420 kb on - strand at 566.428 kb on + strand at 566.428 kb on + strand at 566.428 kb on + strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.429 kb on - strand at 566.469 kb on + strand at 566.470 kb on - strand at 566.490 kb on + strand at 566.490 kb on + strand at 566.490 kb on + strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.491 kb on - strand at 566.498 kb on + strand at 566.498 kb on + strand at 566.509 kb on + strand at 566.509 kb on + strand at 566.509 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 564,134 + AO353_02645 0.63 +0.1 564,134 + AO353_02645 0.63 -0.2 564,197 - AO353_02645 0.73 +1.7 564,264 - AO353_02645 0.85 -0.8 564,278 + AO353_02645 0.87 +0.4 564,308 + -0.6 564,308 + +0.3 564,308 + +1.4 564,308 + -0.3 564,308 + -0.2 564,308 + +0.6 564,308 + -1.7 564,308 + +1.1 564,309 - +1.4 564,309 - +0.5 564,309 - +1.1 564,309 - +0.8 564,309 - -1.0 564,309 - +1.4 564,309 - +0.2 564,365 + +0.7 564,365 + -0.2 564,366 - +0.2 564,382 - +0.0 564,464 - AO353_02650 0.13 +0.4 564,512 + AO353_02650 0.20 +0.4 564,513 - AO353_02650 0.20 -0.6 564,543 - AO353_02650 0.25 +0.4 564,588 + AO353_02650 0.31 +0.5 564,589 - AO353_02650 0.32 -0.7 564,589 - AO353_02650 0.32 +0.2 564,589 - AO353_02650 0.32 +0.1 564,753 + AO353_02650 0.56 +0.1 564,753 + AO353_02650 0.56 +0.9 564,754 - AO353_02650 0.56 +0.3 564,754 - AO353_02650 0.56 -1.6 564,754 - -0.1 564,754 - AO353_02650 0.56 -0.8 564,754 - AO353_02650 0.56 +0.0 564,754 - AO353_02650 0.56 +0.1 564,754 - AO353_02650 0.56 +1.0 564,999 + +0.7 564,999 + -0.6 564,999 + +0.7 564,999 + +1.4 564,999 + +0.2 565,000 - +0.1 565,000 - -0.7 565,000 - -0.3 565,000 - -0.2 565,000 - +0.3 565,000 - -0.4 565,003 + -0.9 565,003 + +1.4 565,003 + +0.9 565,003 + +0.4 565,003 + +0.2 565,003 + +0.9 565,003 + +0.1 565,003 + +0.3 565,003 + -0.4 565,003 + +0.0 565,003 + -0.5 565,003 + +0.8 565,004 - +1.9 565,004 - +2.4 565,004 - -1.1 565,004 - +2.8 565,004 - +0.7 565,004 - -0.1 565,005 + -1.6 565,006 - +0.2 565,006 - +2.1 565,059 + +0.2 565,059 + -0.5 565,110 + +0.4 565,110 + -0.4 565,110 + +0.1 565,110 + +0.7 565,111 - -0.4 565,111 - +1.5 565,125 + AO353_02655 0.13 +1.4 565,126 - AO353_02655 0.13 -1.3 565,126 - AO353_02655 0.13 -0.6 565,157 - AO353_02655 0.19 +1.2 565,200 + AO353_02655 0.27 +2.3 565,200 + AO353_02655 0.27 +0.2 565,200 + AO353_02655 0.27 -0.4 565,200 + AO353_02655 0.27 -1.7 565,200 + AO353_02655 0.27 +1.0 565,200 + AO353_02655 0.27 +0.3 565,201 - AO353_02655 0.27 -0.4 565,201 - AO353_02655 0.27 +0.4 565,201 - AO353_02655 0.27 +1.4 565,201 - AO353_02655 0.27 +0.0 565,201 - AO353_02655 0.27 +0.7 565,265 + AO353_02655 0.39 +1.1 565,266 - AO353_02655 0.39 -0.3 565,266 - AO353_02655 0.39 +1.1 565,266 - AO353_02655 0.39 +0.6 565,333 + AO353_02655 0.51 +0.2 565,333 + AO353_02655 0.51 +1.2 565,357 - AO353_02655 0.56 +0.9 565,357 - AO353_02655 0.56 +0.7 565,396 + AO353_02655 0.63 -0.7 565,396 + AO353_02655 0.63 +0.2 565,396 + AO353_02655 0.63 +0.9 565,396 + AO353_02655 0.63 +0.2 565,396 + AO353_02655 0.63 -2.3 565,397 - AO353_02655 0.63 +1.9 565,413 + AO353_02655 0.66 -1.6 565,568 + +0.4 565,568 + +0.4 565,568 + +0.4 565,568 + +0.6 565,568 + -1.7 565,568 + +1.4 565,568 + +0.7 565,568 + -0.9 565,569 - +1.4 565,569 - +0.5 565,569 - -0.6 565,569 - +1.1 565,569 - -0.8 565,569 - -0.7 565,591 + -2.1 565,591 + +0.3 565,592 - +0.8 565,592 - -0.3 565,592 - +0.2 565,592 - +0.6 565,592 - -1.5 565,592 - +0.5 565,592 - +0.2 565,593 + -0.6 565,593 + +0.0 565,593 + -2.1 565,593 + -0.1 565,593 + -0.3 565,593 + -1.6 565,593 + -0.3 565,593 + -0.1 565,593 + -0.1 565,593 + -1.7 565,593 + +0.2 565,593 + +0.6 565,593 + +0.4 565,593 + +0.4 565,593 + -0.6 565,594 - +0.4 565,594 - +1.0 565,594 - +1.1 565,594 - +0.0 565,594 - +1.0 565,594 - +0.6 565,594 - -0.5 565,594 - -0.0 565,594 - -0.3 565,594 - +0.6 565,594 - +0.4 565,594 - -0.3 565,594 - +0.9 565,665 - -0.7 565,672 + +0.3 565,676 + -0.8 565,677 - -0.3 565,686 + +0.1 565,686 + -0.6 565,686 + +2.0 565,686 + +0.0 565,724 + -0.4 565,732 + +0.3 565,738 + +1.3 565,738 - +1.7 565,831 - AO353_02660 0.12 -0.4 565,831 - AO353_02660 0.12 +0.4 565,847 - AO353_02660 0.14 -1.3 565,908 + AO353_02660 0.24 +0.8 565,908 + AO353_02660 0.24 +0.8 565,909 - AO353_02660 0.24 -1.4 566,067 + AO353_02660 0.50 -0.3 566,185 - AO353_02660 0.69 -0.8 566,241 + AO353_02660 0.78 +0.4 566,241 + AO353_02660 0.78 +0.9 566,241 + AO353_02660 0.78 +0.9 566,241 + AO353_02660 0.78 +0.6 566,242 - AO353_02660 0.78 -0.4 566,246 - AO353_02660 0.78 -1.2 566,375 + +1.1 566,375 + -0.6 566,375 + +0.7 566,375 + -0.3 566,375 + -0.4 566,375 + -2.3 566,376 - -0.9 566,376 - -1.1 566,376 - +0.8 566,376 - +0.3 566,404 + +0.6 566,404 + +0.9 566,419 + -0.3 566,419 + +0.1 566,419 + +0.6 566,420 - +0.4 566,420 - -0.4 566,428 + -0.5 566,428 + +0.1 566,428 + -0.1 566,429 - -0.0 566,429 - -0.1 566,429 - -0.8 566,429 - +1.4 566,469 + +0.1 566,470 - +2.4 566,490 + -0.1 566,490 + +0.9 566,490 + -0.4 566,491 - +1.0 566,491 - +0.4 566,491 - +0.9 566,491 - +0.4 566,491 - -0.0 566,498 + -0.6 566,498 + +0.2 566,509 + -1.4 566,509 + -0.3 566,509 + -0.4
Or see this region's nucleotide sequence