Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02340 and AO353_02345 are separated by 188 nucleotides AO353_02345 and AO353_02350 are separated by 520 nucleotides
AO353_02340: AO353_02340 - hypothetical protein, at 496,653 to 497,960
_02340
AO353_02345: AO353_02345 - purine permease, at 498,149 to 499,507
_02345
AO353_02350: AO353_02350 - hypothetical protein, at 500,028 to 500,813
_02350
Position (kb) 498
499
500 Strain fitness (log2 ratio) -2
-1
0
1
2 at 497.169 kb on + strand, within AO353_02340 at 497.170 kb on - strand, within AO353_02340 at 497.170 kb on - strand, within AO353_02340 at 497.211 kb on - strand, within AO353_02340 at 497.328 kb on + strand, within AO353_02340 at 497.328 kb on + strand, within AO353_02340 at 497.328 kb on + strand, within AO353_02340 at 497.328 kb on + strand, within AO353_02340 at 497.328 kb on + strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.329 kb on - strand, within AO353_02340 at 497.382 kb on + strand, within AO353_02340 at 497.382 kb on + strand, within AO353_02340 at 497.383 kb on - strand, within AO353_02340 at 497.383 kb on - strand, within AO353_02340 at 497.383 kb on - strand, within AO353_02340 at 497.395 kb on - strand, within AO353_02340 at 497.448 kb on + strand, within AO353_02340 at 497.448 kb on + strand, within AO353_02340 at 497.448 kb on + strand, within AO353_02340 at 497.448 kb on + strand, within AO353_02340 at 497.448 kb on + strand, within AO353_02340 at 497.449 kb on - strand, within AO353_02340 at 497.526 kb on + strand, within AO353_02340 at 497.526 kb on + strand, within AO353_02340 at 497.527 kb on - strand, within AO353_02340 at 497.716 kb on + strand, within AO353_02340 at 497.716 kb on + strand, within AO353_02340 at 497.716 kb on + strand, within AO353_02340 at 497.716 kb on + strand, within AO353_02340 at 497.716 kb on + strand, within AO353_02340 at 497.716 kb on + strand, within AO353_02340 at 497.717 kb on - strand, within AO353_02340 at 497.717 kb on - strand, within AO353_02340 at 497.717 kb on - strand, within AO353_02340 at 497.717 kb on - strand, within AO353_02340 at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.958 kb on + strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.959 kb on - strand at 497.965 kb on + strand at 497.965 kb on + strand at 497.965 kb on + strand at 497.965 kb on + strand at 497.965 kb on + strand at 497.965 kb on + strand at 497.966 kb on - strand at 497.966 kb on - strand at 498.103 kb on - strand at 498.103 kb on - strand at 498.127 kb on + strand at 498.127 kb on + strand at 498.128 kb on - strand at 498.128 kb on - strand at 498.128 kb on - strand at 498.251 kb on + strand at 498.251 kb on + strand at 498.252 kb on - strand at 498.252 kb on - strand at 498.252 kb on - strand at 498.252 kb on - strand at 498.252 kb on - strand at 498.448 kb on - strand, within AO353_02345 at 498.448 kb on - strand, within AO353_02345 at 498.448 kb on - strand, within AO353_02345 at 498.674 kb on + strand, within AO353_02345 at 498.697 kb on - strand, within AO353_02345 at 498.697 kb on - strand, within AO353_02345 at 498.779 kb on + strand, within AO353_02345 at 498.779 kb on + strand, within AO353_02345 at 498.779 kb on + strand, within AO353_02345 at 498.780 kb on - strand, within AO353_02345 at 498.780 kb on - strand, within AO353_02345 at 498.780 kb on - strand, within AO353_02345 at 499.081 kb on + strand, within AO353_02345 at 499.452 kb on + strand at 499.452 kb on + strand at 499.453 kb on - strand at 499.512 kb on + strand at 499.512 kb on + strand at 499.569 kb on + strand at 499.570 kb on - strand at 499.595 kb on + strand at 499.596 kb on - strand at 499.630 kb on - strand at 499.635 kb on + strand at 499.635 kb on + strand at 499.635 kb on + strand at 499.635 kb on + strand at 499.636 kb on - strand at 499.636 kb on - strand at 499.719 kb on + strand at 499.719 kb on + strand at 499.720 kb on - strand at 499.748 kb on - strand at 499.765 kb on + strand at 499.825 kb on + strand at 499.825 kb on + strand at 499.825 kb on + strand at 499.825 kb on + strand at 499.947 kb on + strand at 499.947 kb on + strand at 500.010 kb on + strand at 500.010 kb on + strand at 500.010 kb on + strand at 500.011 kb on - strand at 500.036 kb on + strand at 500.036 kb on + strand at 500.036 kb on + strand at 500.036 kb on + strand at 500.036 kb on + strand at 500.036 kb on + strand at 500.036 kb on + strand at 500.037 kb on - strand at 500.037 kb on - strand at 500.037 kb on - strand at 500.046 kb on - strand at 500.130 kb on + strand, within AO353_02350 at 500.130 kb on + strand, within AO353_02350 at 500.130 kb on + strand, within AO353_02350 at 500.130 kb on + strand, within AO353_02350 at 500.130 kb on + strand, within AO353_02350 at 500.130 kb on + strand, within AO353_02350 at 500.131 kb on - strand, within AO353_02350 at 500.131 kb on - strand, within AO353_02350 at 500.131 kb on - strand, within AO353_02350 at 500.131 kb on - strand, within AO353_02350 at 500.131 kb on - strand, within AO353_02350 at 500.208 kb on + strand, within AO353_02350 at 500.208 kb on + strand, within AO353_02350 at 500.244 kb on + strand, within AO353_02350 at 500.245 kb on - strand, within AO353_02350 at 500.245 kb on - strand, within AO353_02350 at 500.245 kb on - strand, within AO353_02350 at 500.265 kb on + strand, within AO353_02350 at 500.266 kb on - strand, within AO353_02350 at 500.266 kb on - strand, within AO353_02350 at 500.277 kb on - strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.283 kb on + strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.284 kb on - strand, within AO353_02350 at 500.286 kb on + strand, within AO353_02350 at 500.286 kb on + strand, within AO353_02350 at 500.286 kb on + strand, within AO353_02350 at 500.286 kb on + strand, within AO353_02350 at 500.287 kb on - strand, within AO353_02350 at 500.287 kb on - strand, within AO353_02350 at 500.287 kb on - strand, within AO353_02350 at 500.287 kb on - strand, within AO353_02350 at 500.287 kb on - strand, within AO353_02350 at 500.379 kb on + strand, within AO353_02350 at 500.379 kb on + strand, within AO353_02350 at 500.380 kb on - strand, within AO353_02350 at 500.380 kb on - strand, within AO353_02350 at 500.409 kb on + strand, within AO353_02350 at 500.409 kb on + strand, within AO353_02350 at 500.409 kb on + strand, within AO353_02350 at 500.409 kb on + strand, within AO353_02350 at 500.409 kb on + strand, within AO353_02350 at 500.454 kb on + strand, within AO353_02350 at 500.454 kb on + strand, within AO353_02350 at 500.454 kb on + strand, within AO353_02350 at 500.455 kb on - strand, within AO353_02350 at 500.455 kb on - strand, within AO353_02350 at 500.472 kb on + strand, within AO353_02350 at 500.472 kb on + strand, within AO353_02350 at 500.472 kb on + strand, within AO353_02350 at 500.473 kb on - strand, within AO353_02350
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 497,169 + AO353_02340 0.39 +0.1 497,170 - AO353_02340 0.40 +1.4 497,170 - AO353_02340 0.40 -0.8 497,211 - AO353_02340 0.43 -2.2 497,328 + AO353_02340 0.52 +0.4 497,328 + AO353_02340 0.52 +0.7 497,328 + AO353_02340 0.52 -1.9 497,328 + AO353_02340 0.52 +0.4 497,328 + AO353_02340 0.52 -0.6 497,329 - AO353_02340 0.52 +1.0 497,329 - AO353_02340 0.52 -0.6 497,329 - AO353_02340 0.52 -0.8 497,329 - AO353_02340 0.52 +1.1 497,329 - AO353_02340 0.52 -0.9 497,329 - AO353_02340 0.52 -0.8 497,329 - AO353_02340 0.52 +1.1 497,329 - AO353_02340 0.52 -0.5 497,329 - AO353_02340 0.52 -0.2 497,329 - AO353_02340 0.52 +2.0 497,329 - AO353_02340 0.52 -0.1 497,329 - AO353_02340 0.52 -0.4 497,329 - AO353_02340 0.52 -0.6 497,382 + AO353_02340 0.56 +0.7 497,382 + AO353_02340 0.56 -1.3 497,383 - AO353_02340 0.56 -0.1 497,383 - AO353_02340 0.56 +0.7 497,383 - AO353_02340 0.56 -0.3 497,395 - AO353_02340 0.57 +0.2 497,448 + AO353_02340 0.61 +0.1 497,448 + AO353_02340 0.61 +0.8 497,448 + AO353_02340 0.61 +0.0 497,448 + AO353_02340 0.61 +0.1 497,448 + AO353_02340 0.61 +0.6 497,449 - AO353_02340 0.61 +0.2 497,526 + AO353_02340 0.67 -2.1 497,526 + AO353_02340 0.67 -0.3 497,527 - AO353_02340 0.67 +0.5 497,716 + AO353_02340 0.81 -0.1 497,716 + AO353_02340 0.81 +0.6 497,716 + AO353_02340 0.81 +0.1 497,716 + AO353_02340 0.81 -0.8 497,716 + AO353_02340 0.81 -0.5 497,716 + AO353_02340 0.81 -0.3 497,717 - AO353_02340 0.81 -1.4 497,717 - AO353_02340 0.81 +1.4 497,717 - AO353_02340 0.81 -0.2 497,717 - AO353_02340 0.81 -1.2 497,958 + -0.7 497,958 + +0.2 497,958 + -0.7 497,958 + +0.1 497,958 + +1.4 497,958 + +0.0 497,958 + +0.6 497,958 + +0.4 497,958 + +1.1 497,958 + +0.1 497,959 - -0.2 497,959 - -0.7 497,959 - -2.1 497,959 - -0.3 497,959 - +0.4 497,959 - +1.4 497,959 - +0.2 497,959 - -1.8 497,959 - -0.0 497,959 - +0.8 497,959 - -1.2 497,959 - +0.2 497,965 + -0.5 497,965 + +0.3 497,965 + -0.2 497,965 + -0.6 497,965 + -0.6 497,965 + +1.4 497,966 - -0.9 497,966 - +1.4 498,103 - +0.3 498,103 - -0.5 498,127 + -0.0 498,127 + -0.9 498,128 - +1.4 498,128 - -2.4 498,128 - -0.6 498,251 + +1.4 498,251 + +0.9 498,252 - -0.2 498,252 - +0.6 498,252 - -0.0 498,252 - +0.7 498,252 - +0.8 498,448 - AO353_02345 0.22 -0.2 498,448 - AO353_02345 0.22 +0.1 498,448 - AO353_02345 0.22 -0.9 498,674 + AO353_02345 0.39 -0.5 498,697 - AO353_02345 0.40 +0.2 498,697 - AO353_02345 0.40 +0.4 498,779 + AO353_02345 0.46 +0.1 498,779 + AO353_02345 0.46 +1.0 498,779 + AO353_02345 0.46 +1.8 498,780 - AO353_02345 0.46 +0.7 498,780 - AO353_02345 0.46 -0.7 498,780 - AO353_02345 0.46 -0.9 499,081 + AO353_02345 0.69 -0.8 499,452 + +1.4 499,452 + -0.3 499,453 - +0.1 499,512 + -0.5 499,512 + +1.2 499,569 + -1.1 499,570 - +1.0 499,595 + +1.4 499,596 - +0.2 499,630 - +0.4 499,635 + +0.1 499,635 + +0.8 499,635 + +0.1 499,635 + +0.6 499,636 - +0.4 499,636 - -1.1 499,719 + +1.4 499,719 + -0.2 499,720 - -0.8 499,748 - -1.1 499,765 + +1.1 499,825 + +0.4 499,825 + -1.7 499,825 + +0.1 499,825 + +0.1 499,947 + +0.6 499,947 + -0.2 500,010 + -0.9 500,010 + +1.0 500,010 + -1.9 500,011 - +0.6 500,036 + +0.1 500,036 + -2.1 500,036 + +0.4 500,036 + -0.2 500,036 + -0.5 500,036 + -0.9 500,036 + -0.1 500,037 - +1.2 500,037 - -1.3 500,037 - -0.3 500,046 - +0.1 500,130 + AO353_02350 0.13 +0.1 500,130 + AO353_02350 0.13 +0.3 500,130 + AO353_02350 0.13 +0.5 500,130 + AO353_02350 0.13 -0.2 500,130 + AO353_02350 0.13 +0.9 500,130 + AO353_02350 0.13 -0.8 500,131 - AO353_02350 0.13 +0.4 500,131 - AO353_02350 0.13 +0.3 500,131 - AO353_02350 0.13 -0.7 500,131 - AO353_02350 0.13 -0.4 500,131 - AO353_02350 0.13 -1.6 500,208 + AO353_02350 0.23 -0.6 500,208 + AO353_02350 0.23 -0.1 500,244 + AO353_02350 0.27 -2.1 500,245 - AO353_02350 0.28 +0.1 500,245 - AO353_02350 0.28 -2.2 500,245 - AO353_02350 0.28 +0.7 500,265 + AO353_02350 0.30 -0.6 500,266 - AO353_02350 0.30 +0.5 500,266 - AO353_02350 0.30 -0.2 500,277 - AO353_02350 0.32 +0.5 500,283 + AO353_02350 0.32 +0.3 500,283 + AO353_02350 0.32 +0.5 500,283 + AO353_02350 0.32 -0.7 500,283 + AO353_02350 0.32 -0.2 500,283 + AO353_02350 0.32 +1.1 500,283 + AO353_02350 0.32 -0.4 500,283 + AO353_02350 0.32 +1.1 500,283 + AO353_02350 0.32 -0.0 500,283 + AO353_02350 0.32 -0.6 500,283 + AO353_02350 0.32 +0.5 500,283 + AO353_02350 0.32 -1.8 500,283 + AO353_02350 0.32 +1.6 500,283 + AO353_02350 0.32 -1.1 500,283 + AO353_02350 0.32 -0.3 500,283 + AO353_02350 0.32 +0.1 500,284 - AO353_02350 0.33 -0.7 500,284 - AO353_02350 0.33 +0.5 500,284 - AO353_02350 0.33 -0.0 500,284 - +2.4 500,284 - AO353_02350 0.33 -0.4 500,284 - AO353_02350 0.33 +0.9 500,284 - AO353_02350 0.33 -0.6 500,284 - AO353_02350 0.33 +0.4 500,284 - AO353_02350 0.33 -0.4 500,284 - AO353_02350 0.33 +2.0 500,284 - AO353_02350 0.33 -0.0 500,286 + AO353_02350 0.33 -0.5 500,286 + AO353_02350 0.33 +0.8 500,286 + AO353_02350 0.33 -0.2 500,286 + AO353_02350 0.33 -0.3 500,287 - AO353_02350 0.33 +0.1 500,287 - AO353_02350 0.33 +0.0 500,287 - AO353_02350 0.33 -1.0 500,287 - AO353_02350 0.33 +0.7 500,287 - AO353_02350 0.33 -0.8 500,379 + AO353_02350 0.45 +1.8 500,379 + AO353_02350 0.45 +0.5 500,380 - AO353_02350 0.45 -0.1 500,380 - AO353_02350 0.45 +0.6 500,409 + AO353_02350 0.48 +0.2 500,409 + AO353_02350 0.48 -1.3 500,409 + AO353_02350 0.48 +0.4 500,409 + AO353_02350 0.48 +1.0 500,409 + AO353_02350 0.48 +0.1 500,454 + AO353_02350 0.54 -0.2 500,454 + AO353_02350 0.54 -0.4 500,454 + AO353_02350 0.54 -0.4 500,455 - AO353_02350 0.54 +0.4 500,455 - AO353_02350 0.54 -0.0 500,472 + AO353_02350 0.56 +1.0 500,472 + AO353_02350 0.56 +0.3 500,472 + AO353_02350 0.56 +0.1 500,473 - AO353_02350 0.57 -1.0
Or see this region's nucleotide sequence