Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00720 and AO353_00725 are separated by 2 nucleotides AO353_00725 and AO353_00730 are separated by 265 nucleotides AO353_00730 and AO353_00735 overlap by 8 nucleotides
AO353_00720: AO353_00720 - chromosome segregation protein SMC, at 154,443 to 157,931
_00720
AO353_00725: AO353_00725 - GntR family transcriptional regulator, at 157,934 to 158,593
_00725
AO353_00730: AO353_00730 - FAD-binding molybdopterin dehydrogenase, at 158,859 to 160,313
_00730
AO353_00735: AO353_00735 - xanthine dehydrogenase, at 160,306 to 162,705
_00735
Position (kb) 158
159
160
161 Strain fitness (log2 ratio) -2
-1
0
1
2 at 157.859 kb on + strand at 157.859 kb on + strand at 157.983 kb on + strand at 157.983 kb on + strand at 157.984 kb on - strand at 157.984 kb on - strand at 158.103 kb on + strand, within AO353_00725 at 158.151 kb on + strand, within AO353_00725 at 158.151 kb on + strand, within AO353_00725 at 158.151 kb on + strand, within AO353_00725 at 158.152 kb on - strand, within AO353_00725 at 158.152 kb on - strand, within AO353_00725 at 158.152 kb on - strand, within AO353_00725 at 158.158 kb on + strand, within AO353_00725 at 158.232 kb on + strand, within AO353_00725 at 158.232 kb on + strand, within AO353_00725 at 158.232 kb on + strand, within AO353_00725 at 158.233 kb on - strand, within AO353_00725 at 158.325 kb on + strand at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.621 kb on - strand at 158.637 kb on - strand at 158.707 kb on + strand at 158.707 kb on + strand at 158.708 kb on - strand at 158.708 kb on - strand at 158.708 kb on - strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.758 kb on + strand at 158.758 kb on + strand at 158.772 kb on + strand at 158.772 kb on + strand at 158.772 kb on + strand at 158.773 kb on - strand at 158.773 kb on - strand at 158.810 kb on - strand at 158.837 kb on + strand at 158.838 kb on - strand at 158.872 kb on + strand at 158.872 kb on + strand at 158.876 kb on + strand at 158.877 kb on - strand at 158.877 kb on - strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.932 kb on - strand at 158.932 kb on - strand at 158.932 kb on - strand at 158.932 kb on - strand at 158.999 kb on + strand at 159.000 kb on - strand at 159.000 kb on - strand at 159.492 kb on + strand, within AO353_00730 at 159.492 kb on + strand, within AO353_00730 at 159.492 kb on + strand, within AO353_00730 at 159.492 kb on + strand, within AO353_00730 at 159.492 kb on + strand, within AO353_00730 at 159.493 kb on - strand, within AO353_00730 at 159.493 kb on - strand, within AO353_00730 at 159.493 kb on - strand, within AO353_00730 at 159.493 kb on - strand, within AO353_00730 at 159.585 kb on + strand, within AO353_00730 at 159.585 kb on + strand, within AO353_00730 at 159.585 kb on + strand, within AO353_00730 at 159.585 kb on + strand, within AO353_00730 at 159.585 kb on + strand, within AO353_00730 at 159.586 kb on - strand, within AO353_00730 at 159.586 kb on - strand, within AO353_00730 at 159.586 kb on - strand, within AO353_00730 at 159.672 kb on + strand, within AO353_00730 at 159.672 kb on + strand, within AO353_00730 at 159.673 kb on - strand, within AO353_00730 at 159.673 kb on - strand, within AO353_00730 at 159.693 kb on + strand, within AO353_00730 at 159.876 kb on + strand, within AO353_00730 at 159.876 kb on + strand, within AO353_00730 at 159.877 kb on - strand, within AO353_00730 at 159.877 kb on - strand, within AO353_00730 at 159.877 kb on - strand, within AO353_00730 at 159.972 kb on + strand, within AO353_00730 at 159.972 kb on + strand, within AO353_00730 at 159.972 kb on + strand, within AO353_00730 at 159.972 kb on + strand, within AO353_00730 at 159.973 kb on - strand, within AO353_00730 at 159.973 kb on - strand, within AO353_00730 at 159.973 kb on - strand, within AO353_00730 at 160.222 kb on - strand at 160.253 kb on + strand at 160.253 kb on + strand at 160.253 kb on + strand at 160.253 kb on + strand at 160.258 kb on - strand at 160.305 kb on + strand at 160.305 kb on + strand at 160.305 kb on + strand at 160.305 kb on + strand at 160.305 kb on + strand at 160.305 kb on + strand at 160.306 kb on - strand at 160.306 kb on - strand at 160.306 kb on - strand at 160.306 kb on - strand at 160.306 kb on - strand at 160.311 kb on + strand at 160.311 kb on + strand at 160.312 kb on - strand at 160.438 kb on + strand at 160.438 kb on + strand at 160.438 kb on + strand at 160.438 kb on + strand at 160.438 kb on + strand at 160.438 kb on + strand at 160.439 kb on - strand at 160.439 kb on - strand at 160.439 kb on - strand at 160.439 kb on - strand at 160.439 kb on - strand at 160.480 kb on + strand at 160.481 kb on - strand at 160.531 kb on - strand at 160.540 kb on + strand at 160.541 kb on - strand at 160.647 kb on - strand, within AO353_00735 at 160.647 kb on - strand, within AO353_00735 at 160.647 kb on - strand, within AO353_00735 at 160.732 kb on + strand, within AO353_00735 at 160.732 kb on + strand, within AO353_00735 at 160.733 kb on - strand, within AO353_00735 at 160.790 kb on + strand, within AO353_00735 at 160.791 kb on - strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.894 kb on + strand, within AO353_00735 at 160.895 kb on - strand, within AO353_00735 at 160.951 kb on + strand, within AO353_00735 at 160.951 kb on + strand, within AO353_00735 at 160.952 kb on - strand, within AO353_00735 at 160.952 kb on - strand, within AO353_00735 at 161.191 kb on + strand, within AO353_00735 at 161.191 kb on + strand, within AO353_00735 at 161.191 kb on + strand, within AO353_00735 at 161.191 kb on + strand, within AO353_00735 at 161.192 kb on - strand, within AO353_00735 at 161.192 kb on - strand, within AO353_00735 at 161.192 kb on - strand, within AO353_00735 at 161.192 kb on - strand, within AO353_00735 at 161.192 kb on - strand, within AO353_00735 at 161.200 kb on + strand, within AO353_00735 at 161.200 kb on + strand, within AO353_00735 at 161.200 kb on + strand, within AO353_00735 at 161.201 kb on - strand, within AO353_00735 at 161.201 kb on - strand, within AO353_00735 at 161.201 kb on - strand, within AO353_00735 at 161.201 kb on - strand, within AO353_00735
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 157,859 + +0.4 157,859 + -1.5 157,983 + -1.2 157,983 + -0.3 157,984 - +0.7 157,984 - +0.3 158,103 + AO353_00725 0.26 -0.5 158,151 + AO353_00725 0.33 +0.6 158,151 + AO353_00725 0.33 -0.4 158,151 + AO353_00725 0.33 -0.6 158,152 - AO353_00725 0.33 +0.0 158,152 - AO353_00725 0.33 +0.5 158,152 - AO353_00725 0.33 +0.9 158,158 + AO353_00725 0.34 +0.4 158,232 + AO353_00725 0.45 -0.7 158,232 + AO353_00725 0.45 +0.3 158,232 + AO353_00725 0.45 -1.2 158,233 - AO353_00725 0.45 -2.0 158,325 + -0.7 158,325 + AO353_00725 0.59 +0.8 158,325 + AO353_00725 0.59 -1.1 158,325 + +0.9 158,325 + AO353_00725 0.59 -0.3 158,325 + AO353_00725 0.59 -0.4 158,325 + AO353_00725 0.59 -0.4 158,325 + AO353_00725 0.59 -1.3 158,325 + AO353_00725 0.59 -0.1 158,325 + AO353_00725 0.59 +0.9 158,325 + AO353_00725 0.59 -0.6 158,325 + AO353_00725 0.59 -0.5 158,325 + AO353_00725 0.59 -0.5 158,326 - AO353_00725 0.59 +0.1 158,326 - AO353_00725 0.59 +0.5 158,326 - AO353_00725 0.59 -0.0 158,326 - AO353_00725 0.59 -2.3 158,326 - AO353_00725 0.59 -1.2 158,621 - -1.0 158,637 - -1.3 158,707 + +0.3 158,707 + -0.7 158,708 - +0.3 158,708 - -1.0 158,708 - -0.3 158,732 + +0.9 158,732 + -0.6 158,732 + +0.3 158,732 + +0.3 158,732 + +1.0 158,732 + -0.3 158,732 + -0.3 158,732 + -0.0 158,732 + +1.0 158,733 - -0.9 158,733 - -2.0 158,733 - -0.5 158,733 - -1.3 158,733 - +0.1 158,733 - -0.0 158,733 - +1.3 158,758 + -0.6 158,758 + -1.8 158,772 + +1.7 158,772 + -0.3 158,772 + +0.4 158,773 - -1.3 158,773 - -0.7 158,810 - -1.1 158,837 + +0.7 158,838 - -0.9 158,872 + -0.7 158,872 + +0.2 158,876 + +1.0 158,877 - +0.4 158,877 - -1.0 158,931 + +0.9 158,931 + +0.3 158,931 + -1.0 158,931 + +0.6 158,931 + +1.0 158,931 + -0.8 158,932 - -1.0 158,932 - +0.7 158,932 - +0.8 158,932 - -0.3 158,999 + +0.3 159,000 - +1.3 159,000 - +1.1 159,492 + AO353_00730 0.44 -0.5 159,492 + AO353_00730 0.44 -0.5 159,492 + AO353_00730 0.44 -0.8 159,492 + AO353_00730 0.44 +0.1 159,492 + AO353_00730 0.44 -2.4 159,493 - AO353_00730 0.44 -0.9 159,493 - AO353_00730 0.44 -0.0 159,493 - AO353_00730 0.44 -0.7 159,493 - AO353_00730 0.44 -0.4 159,585 + AO353_00730 0.50 +0.0 159,585 + AO353_00730 0.50 -1.0 159,585 + AO353_00730 0.50 -1.5 159,585 + AO353_00730 0.50 -0.2 159,585 + AO353_00730 0.50 -2.3 159,586 - AO353_00730 0.50 -0.2 159,586 - AO353_00730 0.50 +0.9 159,586 - AO353_00730 0.50 +0.4 159,672 + AO353_00730 0.56 +1.3 159,672 + AO353_00730 0.56 -2.3 159,673 - AO353_00730 0.56 +0.9 159,673 - AO353_00730 0.56 -0.9 159,693 + AO353_00730 0.57 -1.3 159,876 + AO353_00730 0.70 +0.3 159,876 + AO353_00730 0.70 -0.8 159,877 - AO353_00730 0.70 -0.9 159,877 - AO353_00730 0.70 -0.6 159,877 - AO353_00730 0.70 +0.5 159,972 + AO353_00730 0.76 -1.7 159,972 + AO353_00730 0.76 +0.9 159,972 + AO353_00730 0.76 -0.3 159,972 + AO353_00730 0.76 -2.2 159,973 - AO353_00730 0.77 -0.5 159,973 - AO353_00730 0.77 +0.7 159,973 - AO353_00730 0.77 +1.9 160,222 - -0.5 160,253 + -0.9 160,253 + -0.1 160,253 + +1.3 160,253 + +1.9 160,258 - -0.5 160,305 + -1.3 160,305 + -0.1 160,305 + -0.7 160,305 + -0.2 160,305 + -1.9 160,305 + +0.0 160,306 - -2.3 160,306 - -0.1 160,306 - +0.1 160,306 - -0.2 160,306 - -1.0 160,311 + -0.3 160,311 + +0.4 160,312 - -1.1 160,438 + -0.3 160,438 + +0.5 160,438 + -0.7 160,438 + +0.1 160,438 + +0.7 160,438 + +0.2 160,439 - +1.9 160,439 - -1.0 160,439 - +0.5 160,439 - +0.3 160,439 - -0.7 160,480 + -0.3 160,481 - +0.2 160,531 - -0.2 160,540 + +1.1 160,541 - +1.3 160,647 - AO353_00735 0.14 +0.8 160,647 - AO353_00735 0.14 -0.5 160,647 - AO353_00735 0.14 -1.6 160,732 + AO353_00735 0.18 +0.5 160,732 + AO353_00735 0.18 -1.3 160,733 - AO353_00735 0.18 +0.3 160,790 + AO353_00735 0.20 -0.0 160,791 - AO353_00735 0.20 +1.3 160,894 + AO353_00735 0.24 -0.4 160,894 + AO353_00735 0.24 -1.5 160,894 + AO353_00735 0.24 -0.1 160,894 + AO353_00735 0.24 -0.5 160,894 + AO353_00735 0.24 -1.7 160,894 + AO353_00735 0.24 -0.5 160,894 + AO353_00735 0.24 -0.1 160,895 - AO353_00735 0.25 +0.9 160,951 + AO353_00735 0.27 +1.3 160,951 + AO353_00735 0.27 +0.2 160,952 - AO353_00735 0.27 +0.5 160,952 - AO353_00735 0.27 -0.2 161,191 + AO353_00735 0.37 +1.7 161,191 + AO353_00735 0.37 -1.3 161,191 + AO353_00735 0.37 +0.4 161,191 + AO353_00735 0.37 +1.7 161,192 - AO353_00735 0.37 -0.9 161,192 - AO353_00735 0.37 +0.1 161,192 - AO353_00735 0.37 -2.1 161,192 - AO353_00735 0.37 -0.3 161,192 - AO353_00735 0.37 +1.0 161,200 + AO353_00735 0.37 +1.7 161,200 + AO353_00735 0.37 -0.6 161,200 + AO353_00735 0.37 -0.5 161,201 - AO353_00735 0.37 -1.1 161,201 - AO353_00735 0.37 +0.5 161,201 - AO353_00735 0.37 +0.7 161,201 - AO353_00735 0.37 +0.3
Or see this region's nucleotide sequence