Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00085 and AO353_00090 are separated by 996 nucleotides AO353_00090 and AO353_00095 are separated by 58 nucleotides
AO353_00085: AO353_00085 - phospholipase, at 17,530 to 18,240
_00085
AO353_00090: AO353_00090 - hypothetical protein, at 19,237 to 19,452
_00090
AO353_00095: AO353_00095 - hypothetical protein, at 19,511 to 20,884
_00095
Position (kb) 19
20 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 18.251 kb on + strand at 18.280 kb on + strand at 18.281 kb on - strand at 18.281 kb on - strand at 18.635 kb on + strand at 18.635 kb on + strand at 18.751 kb on + strand at 18.757 kb on + strand at 18.758 kb on - strand at 18.758 kb on - strand at 18.758 kb on - strand at 18.758 kb on - strand at 18.769 kb on + strand at 18.769 kb on + strand at 18.769 kb on + strand at 18.769 kb on + strand at 18.769 kb on + strand at 18.770 kb on - strand at 18.770 kb on - strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.775 kb on + strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.776 kb on - strand at 18.779 kb on + strand at 18.779 kb on + strand at 18.779 kb on + strand at 18.862 kb on + strand at 18.863 kb on - strand at 18.869 kb on + strand at 18.870 kb on - strand at 18.870 kb on - strand at 18.879 kb on + strand at 18.879 kb on + strand at 18.879 kb on + strand at 18.879 kb on + strand at 18.880 kb on - strand at 18.880 kb on - strand at 18.880 kb on - strand at 18.946 kb on + strand at 18.946 kb on + strand at 18.946 kb on + strand at 18.946 kb on + strand at 18.946 kb on + strand at 18.946 kb on + strand at 18.946 kb on + strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.947 kb on - strand at 18.979 kb on + strand at 18.980 kb on - strand at 18.980 kb on - strand at 18.980 kb on - strand at 18.980 kb on - strand at 19.035 kb on - strand at 19.037 kb on + strand at 19.038 kb on - strand at 19.054 kb on + strand at 19.054 kb on + strand at 19.054 kb on + strand at 19.054 kb on + strand at 19.054 kb on + strand at 19.055 kb on - strand at 19.055 kb on - strand at 19.055 kb on - strand at 19.058 kb on + strand at 19.059 kb on - strand at 19.059 kb on - strand at 19.108 kb on + strand at 19.108 kb on + strand at 19.108 kb on + strand at 19.204 kb on + strand at 19.205 kb on - strand at 19.205 kb on - strand at 19.205 kb on - strand at 19.211 kb on + strand at 19.211 kb on + strand at 19.212 kb on - strand at 19.212 kb on - strand at 19.249 kb on + strand at 19.292 kb on + strand, within AO353_00090 at 19.292 kb on + strand, within AO353_00090 at 19.292 kb on + strand, within AO353_00090 at 19.405 kb on + strand, within AO353_00090 at 19.406 kb on - strand, within AO353_00090 at 19.406 kb on - strand, within AO353_00090 at 19.407 kb on + strand, within AO353_00090 at 19.458 kb on - strand at 19.506 kb on - strand at 19.552 kb on - strand at 19.823 kb on - strand, within AO353_00095 at 20.059 kb on + strand, within AO353_00095 at 20.059 kb on + strand, within AO353_00095 at 20.060 kb on - strand, within AO353_00095 at 20.134 kb on + strand, within AO353_00095 at 20.134 kb on + strand, within AO353_00095 at 20.155 kb on - strand, within AO353_00095 at 20.188 kb on - strand, within AO353_00095 at 20.188 kb on - strand, within AO353_00095 at 20.208 kb on + strand, within AO353_00095 at 20.278 kb on + strand, within AO353_00095 at 20.319 kb on + strand, within AO353_00095 at 20.320 kb on - strand, within AO353_00095 at 20.356 kb on + strand, within AO353_00095 at 20.387 kb on - strand, within AO353_00095 at 20.396 kb on + strand, within AO353_00095 at 20.424 kb on + strand, within AO353_00095
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 18,251 + +0.2 18,280 + -1.0 18,281 - +0.5 18,281 - -0.2 18,635 + -0.5 18,635 + +0.1 18,751 + -1.2 18,757 + +0.3 18,758 - +0.5 18,758 - +0.6 18,758 - +0.2 18,758 - +0.3 18,769 + -0.3 18,769 + -0.9 18,769 + +0.1 18,769 + +1.0 18,769 + -0.9 18,770 - -0.4 18,770 - -0.0 18,775 + -0.0 18,775 + +0.6 18,775 + -0.0 18,775 + -0.4 18,775 + -0.2 18,775 + +1.3 18,775 + +0.3 18,775 + -0.5 18,775 + -1.5 18,775 + -1.3 18,775 + +0.3 18,775 + -0.7 18,775 + -0.3 18,775 + -0.4 18,775 + +1.0 18,775 + +0.9 18,775 + +0.3 18,776 - -0.6 18,776 - -0.4 18,776 - -0.7 18,776 - +0.7 18,776 - +0.8 18,776 - +0.7 18,776 - -2.0 18,776 - +0.5 18,776 - -0.2 18,776 - +0.1 18,776 - +0.4 18,776 - -0.3 18,776 - +0.1 18,776 - +0.3 18,776 - -0.2 18,776 - +2.0 18,776 - +1.3 18,776 - -1.2 18,776 - -0.7 18,776 - +1.5 18,776 - -0.1 18,776 - -1.3 18,776 - +1.0 18,776 - -0.2 18,776 - +0.5 18,776 - -1.2 18,779 + +0.1 18,779 + +1.6 18,779 + +0.3 18,862 + +0.4 18,863 - +0.3 18,869 + -0.5 18,870 - -1.0 18,870 - +0.7 18,879 + -0.0 18,879 + +1.8 18,879 + +0.5 18,879 + +0.3 18,880 - +1.5 18,880 - -0.0 18,880 - -1.1 18,946 + +0.7 18,946 + +1.3 18,946 + +3.9 18,946 + +0.5 18,946 + -0.4 18,946 + -1.5 18,946 + +0.5 18,947 - -0.3 18,947 - -0.9 18,947 - +1.0 18,947 - +0.5 18,947 - +1.3 18,947 - +0.5 18,947 - +0.3 18,947 - +0.3 18,947 - -0.3 18,947 - -0.6 18,947 - +1.0 18,979 + -1.0 18,980 - -0.5 18,980 - -0.5 18,980 - +1.3 18,980 - -0.5 19,035 - +1.2 19,037 + +1.3 19,038 - +0.3 19,054 + -0.3 19,054 + +0.4 19,054 + -0.9 19,054 + +0.1 19,054 + -0.7 19,055 - -0.1 19,055 - +3.1 19,055 - -0.7 19,058 + +0.1 19,059 - +0.3 19,059 - -0.9 19,108 + +0.7 19,108 + +1.3 19,108 + -0.2 19,204 + +1.7 19,205 - -1.0 19,205 - -0.3 19,205 - -0.5 19,211 + +1.5 19,211 + +0.2 19,212 - +0.7 19,212 - +0.1 19,249 + -1.3 19,292 + AO353_00090 0.25 -1.5 19,292 + AO353_00090 0.25 -0.7 19,292 + AO353_00090 0.25 -0.7 19,405 + AO353_00090 0.78 -1.2 19,406 - AO353_00090 0.78 -0.4 19,406 - AO353_00090 0.78 -1.8 19,407 + AO353_00090 0.79 -1.2 19,458 - -0.2 19,506 - +3.6 19,552 - -1.0 19,823 - AO353_00095 0.23 -0.2 20,059 + AO353_00095 0.40 -1.0 20,059 + AO353_00095 0.40 -0.2 20,060 - AO353_00095 0.40 -0.8 20,134 + AO353_00095 0.45 +1.3 20,134 + AO353_00095 0.45 +1.3 20,155 - AO353_00095 0.47 -0.7 20,188 - AO353_00095 0.49 +0.3 20,188 - AO353_00095 0.49 -0.5 20,208 + AO353_00095 0.51 +1.3 20,278 + AO353_00095 0.56 +3.6 20,319 + AO353_00095 0.59 -0.6 20,320 - AO353_00095 0.59 +0.1 20,356 + AO353_00095 0.61 +1.1 20,387 - AO353_00095 0.64 +1.4 20,396 + AO353_00095 0.64 +0.5 20,424 + AO353_00095 0.66 -1.3
Or see this region's nucleotide sequence