Experiment: MoYLS4 with Chloride 62.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1098 and DvMF_1099 are separated by 121 nucleotides DvMF_1099 and DvMF_1100 are separated by 18 nucleotides
DvMF_1098: DvMF_1098 - glycosyl transferase group 1 (RefSeq), at 1,344,215 to 1,345,441
_1098
DvMF_1099: DvMF_1099 - drug resistance transporter, EmrB/QacA subfamily (RefSeq), at 1,345,563 to 1,347,122
_1099
DvMF_1100: DvMF_1100 - secretion protein HlyD family protein (RefSeq), at 1,347,141 to 1,348,472
_1100
Position (kb)
1345
1346
1347
1348 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1344.593 kb on - strand, within DvMF_1098 at 1344.609 kb on - strand, within DvMF_1098 at 1344.641 kb on + strand, within DvMF_1098 at 1344.801 kb on - strand, within DvMF_1098 at 1344.913 kb on + strand, within DvMF_1098 at 1344.957 kb on + strand, within DvMF_1098 at 1345.073 kb on - strand, within DvMF_1098 at 1345.128 kb on - strand, within DvMF_1098 at 1345.386 kb on + strand at 1345.423 kb on - strand at 1345.583 kb on - strand at 1345.801 kb on + strand, within DvMF_1099 at 1346.007 kb on + strand, within DvMF_1099 at 1346.363 kb on + strand, within DvMF_1099 at 1346.501 kb on - strand, within DvMF_1099 at 1346.575 kb on + strand, within DvMF_1099 at 1346.577 kb on - strand, within DvMF_1099 at 1346.577 kb on - strand, within DvMF_1099 at 1346.854 kb on - strand, within DvMF_1099 at 1347.268 kb on - strand at 1347.319 kb on - strand, within DvMF_1100 at 1347.423 kb on - strand, within DvMF_1100 at 1347.524 kb on - strand, within DvMF_1100 at 1347.618 kb on - strand, within DvMF_1100 at 1347.817 kb on + strand, within DvMF_1100
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chloride 62.5 mM remove 1,344,593 - DvMF_1098 0.31 -2.2 1,344,609 - DvMF_1098 0.32 -0.9 1,344,641 + DvMF_1098 0.35 -3.1 1,344,801 - DvMF_1098 0.48 -0.8 1,344,913 + DvMF_1098 0.57 -1.4 1,344,957 + DvMF_1098 0.60 -1.0 1,345,073 - DvMF_1098 0.70 -1.1 1,345,128 - DvMF_1098 0.74 -1.7 1,345,386 + -0.1 1,345,423 - -1.5 1,345,583 - -0.9 1,345,801 + DvMF_1099 0.15 -1.2 1,346,007 + DvMF_1099 0.28 -1.2 1,346,363 + DvMF_1099 0.51 -1.5 1,346,501 - DvMF_1099 0.60 -1.0 1,346,575 + DvMF_1099 0.65 -1.1 1,346,577 - DvMF_1099 0.65 -1.7 1,346,577 - DvMF_1099 0.65 -0.8 1,346,854 - DvMF_1099 0.83 -1.2 1,347,268 - -1.1 1,347,319 - DvMF_1100 0.13 -0.1 1,347,423 - DvMF_1100 0.21 -1.2 1,347,524 - DvMF_1100 0.29 -1.2 1,347,618 - DvMF_1100 0.36 -0.8 1,347,817 + DvMF_1100 0.51 -1.4
Or see this region's nucleotide sequence