Experiment: MoYLS4 with Chloride 62.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0833 and DvMF_0834 overlap by 1 nucleotides DvMF_0834 and DvMF_0835 are separated by 133 nucleotides DvMF_0835 and DvMF_0836 are separated by 23 nucleotides
DvMF_0833: DvMF_0833 - cobalamin biosynthesis protein CbiB (RefSeq), at 1,005,855 to 1,006,979
_0833
DvMF_0834: DvMF_0834 - tRNA/rRNA methyltransferase (SpoU) (RefSeq), at 1,006,979 to 1,007,437
_0834
DvMF_0835: DvMF_0835 - Beta-N-acetylhexosaminidase (RefSeq), at 1,007,571 to 1,009,331
_0835
DvMF_0836: DvMF_0836 - Hydantoinase/oxoprolinase (RefSeq), at 1,009,355 to 1,011,106
_0836
Position (kb)
1007
1008
1009
1010 Strain fitness (log2 ratio)
-1
0
1 at 1006.609 kb on + strand, within DvMF_0833 at 1006.635 kb on + strand, within DvMF_0833 at 1007.047 kb on + strand, within DvMF_0834 at 1007.047 kb on + strand, within DvMF_0834 at 1007.047 kb on + strand, within DvMF_0834 at 1007.055 kb on - strand, within DvMF_0834 at 1007.055 kb on - strand, within DvMF_0834 at 1007.055 kb on - strand, within DvMF_0834 at 1007.055 kb on - strand, within DvMF_0834 at 1007.055 kb on - strand, within DvMF_0834 at 1007.118 kb on - strand, within DvMF_0834 at 1007.951 kb on - strand, within DvMF_0835 at 1008.001 kb on - strand, within DvMF_0835 at 1008.260 kb on - strand, within DvMF_0835 at 1008.320 kb on - strand, within DvMF_0835 at 1008.382 kb on - strand, within DvMF_0835 at 1008.656 kb on - strand, within DvMF_0835 at 1008.680 kb on - strand, within DvMF_0835 at 1008.977 kb on - strand, within DvMF_0835 at 1008.993 kb on + strand, within DvMF_0835 at 1009.272 kb on - strand at 1009.381 kb on + strand at 1009.415 kb on - strand at 1009.758 kb on + strand, within DvMF_0836 at 1009.771 kb on - strand, within DvMF_0836 at 1009.809 kb on + strand, within DvMF_0836 at 1009.842 kb on - strand, within DvMF_0836 at 1009.865 kb on + strand, within DvMF_0836 at 1009.873 kb on - strand, within DvMF_0836 at 1010.223 kb on - strand, within DvMF_0836 at 1010.331 kb on - strand, within DvMF_0836 at 1010.331 kb on - strand, within DvMF_0836
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chloride 62.5 mM remove 1,006,609 + DvMF_0833 0.67 -1.4 1,006,635 + DvMF_0833 0.69 -0.7 1,007,047 + DvMF_0834 0.15 -0.4 1,007,047 + DvMF_0834 0.15 -0.8 1,007,047 + DvMF_0834 0.15 -0.5 1,007,055 - DvMF_0834 0.17 -0.4 1,007,055 - DvMF_0834 0.17 -0.4 1,007,055 - DvMF_0834 0.17 -0.3 1,007,055 - DvMF_0834 0.17 -0.2 1,007,055 - DvMF_0834 0.17 -0.7 1,007,118 - DvMF_0834 0.30 -0.0 1,007,951 - DvMF_0835 0.22 -0.3 1,008,001 - DvMF_0835 0.24 -0.1 1,008,260 - DvMF_0835 0.39 +0.1 1,008,320 - DvMF_0835 0.43 -0.3 1,008,382 - DvMF_0835 0.46 -0.3 1,008,656 - DvMF_0835 0.62 +0.9 1,008,680 - DvMF_0835 0.63 -0.1 1,008,977 - DvMF_0835 0.80 +0.0 1,008,993 + DvMF_0835 0.81 +0.4 1,009,272 - +0.2 1,009,381 + +0.2 1,009,415 - -0.3 1,009,758 + DvMF_0836 0.23 -0.5 1,009,771 - DvMF_0836 0.24 -0.8 1,009,809 + DvMF_0836 0.26 -0.3 1,009,842 - DvMF_0836 0.28 +0.1 1,009,865 + DvMF_0836 0.29 -0.4 1,009,873 - DvMF_0836 0.30 -0.1 1,010,223 - DvMF_0836 0.50 -0.1 1,010,331 - DvMF_0836 0.56 -0.9 1,010,331 - DvMF_0836 0.56 -0.6
Or see this region's nucleotide sequence