Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1244

Experiment: Darkness for 72h then Flask growth in 60 uE constant light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Darkness for 72h then Flask growth in 60 uE constant light
1,267,377	-				-0.1
1,267,382	-				-0.1
1,267,382	-				-0.1
1,267,445	+				-0.4
1,267,453	-				-0.2
1,267,453	-				+0.1
1,267,453	-				+0.1
1,267,453	-				-0.4
1,267,463	-				+0.5
1,267,466	+				+0.2
1,267,469	-				+1.2
1,267,484	+				-1.0
1,267,484	+				-0.9
1,267,514	+		Synpcc7942_1243	0.13	-1.2
1,267,514	+		Synpcc7942_1243	0.13	+0.6
1,267,514	+				+0.7
1,267,522	-		Synpcc7942_1243	0.14	-1.1
1,267,522	-		Synpcc7942_1243	0.14	-0.3
1,267,522	-				+1.9
1,267,534	+		Synpcc7942_1243	0.16	-0.8
1,267,566	+		Synpcc7942_1243	0.21	-0.8
1,267,571	+		Synpcc7942_1243	0.21	+0.2
1,267,574	-		Synpcc7942_1243	0.22	-0.2
1,267,582	+		Synpcc7942_1243	0.23	-1.0
1,267,587	+		Synpcc7942_1243	0.24	+0.1
1,267,618	+		Synpcc7942_1243	0.28	-0.1
1,267,641	+		Synpcc7942_1243	0.31	-0.1
1,267,650	+		Synpcc7942_1243	0.33	+0.4
1,267,651	+		Synpcc7942_1243	0.33	-1.8
1,267,664	-		Synpcc7942_1243	0.35	+0.2
1,267,664	-		Synpcc7942_1243	0.35	+0.5
1,267,675	+		Synpcc7942_1243	0.36	-0.4
1,267,689	+		Synpcc7942_1243	0.38	+1.4
1,267,721	-		Synpcc7942_1243	0.43	-0.3
1,267,742	-		Synpcc7942_1243	0.46	-0.1
1,267,742	-		Synpcc7942_1243	0.46	+0.4
1,267,742	-		Synpcc7942_1243	0.46	+0.1
1,267,742	-		Synpcc7942_1243	0.46	-0.3
1,267,747	-				+0.7
1,267,763	+		Synpcc7942_1243	0.49	+0.1
1,267,776	+		Synpcc7942_1243	0.51	-0.4
1,267,777	+		Synpcc7942_1243	0.51	-0.3
1,267,778	-		Synpcc7942_1243	0.51	-0.0
1,267,778	-		Synpcc7942_1243	0.51	+0.1
1,267,782	+		Synpcc7942_1243	0.52	-0.9
1,267,782	+		Synpcc7942_1243	0.52	-0.8
1,267,812	+		Synpcc7942_1243	0.56	+0.3
1,267,827	-		Synpcc7942_1243	0.58	+0.0
1,267,827	-		Synpcc7942_1243	0.58	+0.2
1,267,881	+		Synpcc7942_1243	0.66	-1.3
1,267,881	-		Synpcc7942_1243	0.66	+0.6
1,267,886	+		Synpcc7942_1243	0.67	-0.5
1,267,886	+		Synpcc7942_1243	0.67	+0.4
1,267,886	+		Synpcc7942_1243	0.67	+0.0
1,267,893	+		Synpcc7942_1243	0.68	+0.7
1,267,894	-		Synpcc7942_1243	0.68	-0.3
1,267,899	-		Synpcc7942_1243	0.69	-0.7
1,267,901	+		Synpcc7942_1243	0.69	+0.5
1,267,937	-		Synpcc7942_1243	0.74	-0.3
1,267,952	+		Synpcc7942_1243	0.76	+0.9
1,267,960	-		Synpcc7942_1243	0.77	-0.1
1,267,975	+		Synpcc7942_1243	0.79	-0.6
1,267,989	-		Synpcc7942_1243	0.81	-0.3
1,268,014	+		Synpcc7942_1243	0.85	+1.1
1,268,017	+		Synpcc7942_1243	0.85	-0.4
1,268,017	+		Synpcc7942_1243	0.85	+0.4
1,268,020	-				-0.9
1,268,022	-		Synpcc7942_1243	0.86	+0.0
1,268,025	-		Synpcc7942_1243	0.87	-0.4
1,268,027	-		Synpcc7942_1243	0.87	+1.1
1,268,037	+		Synpcc7942_1243	0.88	-0.3
1,268,037	+		Synpcc7942_1243	0.88	+0.4
1,268,040	-		Synpcc7942_1243	0.89	-0.2
1,268,045	-		Synpcc7942_1243	0.90	-0.3
1,268,045	-		Synpcc7942_1243	0.90	-0.1
1,268,046	-		Synpcc7942_1243	0.90	-0.0
1,268,056	-				+0.8
1,268,065	+				+1.2
1,268,091	+				+0.4
1,268,137	+				-0.8
1,268,153	-				+0.3
1,268,173	+				-0.8
1,268,173	+				-0.5
1,268,183	+				+0.2
1,268,189	+				+1.0
1,268,189	+				-0.4
1,268,197	-				-1.0
1,268,197	-				+0.7
1,268,211	+				-0.5
1,268,211	+				+0.4
1,268,211	+				-0.2
1,268,211	+				-1.1
1,268,219	-				+0.4
1,268,219	-				-0.2
1,268,219	-				+0.0
1,268,219	-				-0.3
1,268,219	-				-0.1
1,268,250	+				-0.5
1,268,258	-				-0.2
1,268,287	-				+0.1
1,268,293	+				+0.1
1,268,296	-				+1.5
1,268,330	-				+0.7
1,268,330	-				-0.5
1,268,353	+				+0.1
1,268,353	+				+0.7
1,268,353	+				-1.2
1,268,355	-				+0.3
1,268,360	+				+0.2
1,268,420	-				+0.3
1,268,514	+		Synpcc7942_1244	0.11	+0.3
1,268,532	-		Synpcc7942_1244	0.13	-0.6
1,268,536	-		Synpcc7942_1244	0.13	-1.6
1,268,632	-		Synpcc7942_1244	0.21	-1.7
1,268,641	+		Synpcc7942_1244	0.21	-0.3
1,268,646	+		Synpcc7942_1244	0.22	-1.5
1,268,743	+		Synpcc7942_1244	0.29	-0.3
1,268,859	-		Synpcc7942_1244	0.38	+0.4
1,268,915	+		Synpcc7942_1244	0.42	-0.9
1,269,015	+		Synpcc7942_1244	0.50	-0.6
1,269,031	+		Synpcc7942_1244	0.51	-0.3
1,269,068	+		Synpcc7942_1244	0.54	-1.3
1,269,104	+		Synpcc7942_1244	0.57	-2.2
1,269,112	-		Synpcc7942_1244	0.58	-0.5
1,269,144	+		Synpcc7942_1244	0.60	-3.7
1,269,144	+		Synpcc7942_1244	0.60	-0.6
1,269,152	-		Synpcc7942_1244	0.61	+0.1
1,269,152	-		Synpcc7942_1244	0.61	-1.3
1,269,152	-		Synpcc7942_1244	0.61	-1.0
1,269,152	-		Synpcc7942_1244	0.61	+0.7
1,269,349	-		Synpcc7942_1244	0.76	-0.3
1,269,652	+				+0.4
1,269,659	-				-0.1
1,269,664	+				-0.2
1,270,025	-				+1.8
1,270,060	-		Synpcc7942_1245	0.17	+0.3
1,270,107	+		Synpcc7942_1245	0.31	-0.9
1,270,117	+		Synpcc7942_1245	0.34	-0.6
1,270,122	+		Synpcc7942_1245	0.35	+0.1
1,270,122	+		Synpcc7942_1245	0.35	-0.6
1,270,122	+		Synpcc7942_1245	0.35	-0.1
1,270,122	+		Synpcc7942_1245	0.35	-0.4
1,270,130	-		Synpcc7942_1245	0.37	+0.6
1,270,130	-		Synpcc7942_1245	0.37	-0.0
1,270,130	-		Synpcc7942_1245	0.37	+1.1
1,270,130	-		Synpcc7942_1245	0.37	+0.1
1,270,130	-		Synpcc7942_1245	0.37	-0.1
1,270,130	-		Synpcc7942_1245	0.37	-0.6
1,270,142	+		Synpcc7942_1245	0.41	+0.2
1,270,142	+		Synpcc7942_1245	0.41	+0.0
1,270,143	+		Synpcc7942_1245	0.41	-0.8
1,270,150	-		Synpcc7942_1245	0.43	-0.8
1,270,151	-		Synpcc7942_1245	0.43	-1.7
1,270,151	-		Synpcc7942_1245	0.43	+0.0
1,270,151	-		Synpcc7942_1245	0.43	+0.7
1,270,230	+		Synpcc7942_1245	0.66	+0.5
1,270,253	-		Synpcc7942_1245	0.73	-0.3
1,270,255	+		Synpcc7942_1245	0.74	+0.0
1,270,258	-		Synpcc7942_1245	0.74	-0.3
1,270,258	-		Synpcc7942_1245	0.74	-1.2
1,270,263	-		Synpcc7942_1245	0.76	-0.7
1,270,264	+		Synpcc7942_1245	0.76	-0.6
1,270,269	+		Synpcc7942_1245	0.78	+0.0
1,270,269	+		Synpcc7942_1245	0.78	-0.5
1,270,269	+		Synpcc7942_1245	0.78	+0.0
1,270,269	+		Synpcc7942_1245	0.78	+0.7
1,270,269	+		Synpcc7942_1245	0.78	-0.8
1,270,272	-		Synpcc7942_1245	0.79	+0.4
1,270,277	-		Synpcc7942_1245	0.80	+0.1
1,270,277	-		Synpcc7942_1245	0.80	-0.1
1,270,301	-		Synpcc7942_1245	0.87	+0.0
1,270,334	+				-0.2
1,270,334	+				-0.3
1,270,334	+				+0.1
1,270,339	+				+0.4
1,270,340	-				-0.1
1,270,431	+				-0.0
1,270,436	-				-0.0
1,270,441	+				+0.4
1,270,449	-				-0.1
1,270,649	+				+0.2
1,270,656	+				-0.2
1,270,656	+				+1.0
1,270,659	-				-0.3
1,270,662	+				-0.1