Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2076 and Ac3H11_2077 are separated by 172 nucleotides Ac3H11_2077 and Ac3H11_2078 are separated by 111 nucleotides
Ac3H11_2076 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 300,190 to 301,644
_2076
Ac3H11_2077 - Glucose-6-phosphate isomerase (EC 5.3.1.9), at 301,817 to 303,388
_2077
Ac3H11_2078 - D-mannose isomerase (EC 5.3.1.7) <small>(from data)</small>, at 303,500 to 304,774
_2078
Position (kb) 301
302
303
304 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 300.983 kb on + strand at 300.983 kb on + strand, within Ac3H11_2076 at 300.983 kb on + strand, within Ac3H11_2076 at 301.127 kb on + strand, within Ac3H11_2076 at 301.128 kb on - strand at 301.128 kb on - strand, within Ac3H11_2076 at 301.313 kb on + strand, within Ac3H11_2076 at 301.313 kb on + strand, within Ac3H11_2076 at 301.313 kb on + strand, within Ac3H11_2076 at 301.313 kb on + strand, within Ac3H11_2076 at 301.313 kb on + strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.314 kb on - strand, within Ac3H11_2076 at 301.367 kb on + strand, within Ac3H11_2076 at 301.368 kb on - strand, within Ac3H11_2076 at 301.368 kb on - strand, within Ac3H11_2076 at 301.493 kb on + strand, within Ac3H11_2076 at 301.721 kb on + strand at 301.738 kb on + strand at 301.739 kb on - strand at 301.776 kb on - strand at 303.471 kb on + strand at 303.472 kb on - strand at 303.472 kb on - strand at 303.472 kb on - strand at 303.472 kb on - strand at 303.473 kb on + strand at 303.473 kb on + strand at 303.473 kb on + strand at 303.473 kb on + strand at 303.473 kb on + strand at 303.473 kb on + strand at 303.473 kb on + strand at 303.474 kb on - strand at 303.474 kb on - strand at 303.478 kb on - strand at 303.478 kb on - strand at 303.478 kb on - strand at 303.575 kb on + strand at 303.575 kb on + strand at 303.575 kb on + strand at 303.575 kb on + strand at 303.641 kb on + strand, within Ac3H11_2078 at 303.642 kb on - strand, within Ac3H11_2078 at 303.642 kb on - strand, within Ac3H11_2078 at 303.642 kb on - strand, within Ac3H11_2078 at 303.861 kb on - strand, within Ac3H11_2078 at 303.989 kb on + strand, within Ac3H11_2078 at 303.989 kb on + strand, within Ac3H11_2078 at 303.989 kb on + strand, within Ac3H11_2078 at 303.990 kb on - strand, within Ac3H11_2078 at 304.028 kb on + strand, within Ac3H11_2078 at 304.048 kb on + strand, within Ac3H11_2078 at 304.048 kb on + strand, within Ac3H11_2078 at 304.048 kb on + strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.049 kb on - strand, within Ac3H11_2078 at 304.103 kb on + strand, within Ac3H11_2078 at 304.238 kb on + strand, within Ac3H11_2078 at 304.239 kb on - strand, within Ac3H11_2078 at 304.239 kb on - strand, within Ac3H11_2078
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 300,983 + +0.5 300,983 + Ac3H11_2076 0.55 -2.8 300,983 + Ac3H11_2076 0.55 -2.1 301,127 + Ac3H11_2076 0.64 -0.9 301,128 - +1.5 301,128 - Ac3H11_2076 0.64 -1.3 301,313 + Ac3H11_2076 0.77 -0.1 301,313 + Ac3H11_2076 0.77 -0.9 301,313 + Ac3H11_2076 0.77 +0.5 301,313 + Ac3H11_2076 0.77 -0.1 301,313 + Ac3H11_2076 0.77 +1.1 301,314 - Ac3H11_2076 0.77 -0.9 301,314 - Ac3H11_2076 0.77 -1.1 301,314 - Ac3H11_2076 0.77 -0.5 301,314 - Ac3H11_2076 0.77 -0.1 301,314 - Ac3H11_2076 0.77 -1.3 301,314 - Ac3H11_2076 0.77 -0.9 301,314 - Ac3H11_2076 0.77 -2.2 301,314 - Ac3H11_2076 0.77 -0.9 301,314 - Ac3H11_2076 0.77 -0.9 301,314 - Ac3H11_2076 0.77 -1.1 301,314 - Ac3H11_2076 0.77 -0.5 301,367 + Ac3H11_2076 0.81 -1.9 301,368 - Ac3H11_2076 0.81 -0.1 301,368 - Ac3H11_2076 0.81 -1.1 301,493 + Ac3H11_2076 0.90 -1.1 301,721 + +1.2 301,738 + +0.1 301,739 - -3.1 301,776 - -3.9 303,471 + -0.4 303,472 - -3.3 303,472 - -3.0 303,472 - -3.9 303,472 - -3.4 303,473 + -1.9 303,473 + -2.5 303,473 + -1.5 303,473 + -1.3 303,473 + -2.2 303,473 + -1.2 303,473 + -0.3 303,474 - -2.5 303,474 - -2.9 303,478 - +0.9 303,478 - -1.6 303,478 - -4.1 303,575 + -2.4 303,575 + -2.5 303,575 + -3.1 303,575 + -3.3 303,641 + Ac3H11_2078 0.11 -3.5 303,642 - Ac3H11_2078 0.11 -2.7 303,642 - Ac3H11_2078 0.11 -3.4 303,642 - Ac3H11_2078 0.11 -0.1 303,861 - Ac3H11_2078 0.28 -2.9 303,989 + Ac3H11_2078 0.38 -3.7 303,989 + Ac3H11_2078 0.38 -1.9 303,989 + Ac3H11_2078 0.38 +1.5 303,990 - Ac3H11_2078 0.38 -4.9 304,028 + Ac3H11_2078 0.41 -4.0 304,048 + Ac3H11_2078 0.43 -3.8 304,048 + Ac3H11_2078 0.43 -4.3 304,048 + Ac3H11_2078 0.43 -1.5 304,049 - Ac3H11_2078 0.43 -4.0 304,049 - Ac3H11_2078 0.43 -3.1 304,049 - Ac3H11_2078 0.43 -3.1 304,049 - Ac3H11_2078 0.43 -2.3 304,049 - Ac3H11_2078 0.43 -3.3 304,049 - Ac3H11_2078 0.43 -1.9 304,049 - Ac3H11_2078 0.43 -1.5 304,103 + Ac3H11_2078 0.47 -1.1 304,238 + Ac3H11_2078 0.58 -0.9 304,239 - Ac3H11_2078 0.58 -3.5 304,239 - Ac3H11_2078 0.58 -0.1
Or see this region's nucleotide sequence