Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00830 and AZOBR_RS00835 are separated by 56 nucleotides AZOBR_RS00835 and AZOBR_RS00840 are separated by 100 nucleotides
AZOBR_RS00830: AZOBR_RS00830 - L-asparaginase, at 160,845 to 161,945
_RS00830
AZOBR_RS00835: AZOBR_RS00835 - transcriptional regulator, at 162,002 to 162,853
_RS00835
AZOBR_RS00840: AZOBR_RS00840 - methyltransferase, at 162,954 to 164,192
_RS00840
Position (kb) 162
163 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 161.143 kb on - strand, within AZOBR_RS00830 at 161.143 kb on - strand, within AZOBR_RS00830 at 161.256 kb on + strand, within AZOBR_RS00830 at 161.257 kb on - strand, within AZOBR_RS00830 at 161.409 kb on + strand, within AZOBR_RS00830 at 161.410 kb on - strand, within AZOBR_RS00830 at 161.410 kb on - strand, within AZOBR_RS00830 at 161.410 kb on - strand, within AZOBR_RS00830 at 162.029 kb on + strand at 162.029 kb on + strand at 162.129 kb on - strand, within AZOBR_RS00835 at 162.308 kb on + strand, within AZOBR_RS00835 at 162.308 kb on + strand, within AZOBR_RS00835 at 162.308 kb on + strand, within AZOBR_RS00835 at 162.309 kb on - strand, within AZOBR_RS00835 at 162.309 kb on - strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.455 kb on + strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.456 kb on - strand, within AZOBR_RS00835 at 162.457 kb on + strand, within AZOBR_RS00835 at 162.457 kb on + strand, within AZOBR_RS00835 at 162.457 kb on + strand, within AZOBR_RS00835 at 162.457 kb on + strand, within AZOBR_RS00835 at 162.458 kb on - strand, within AZOBR_RS00835 at 162.458 kb on - strand, within AZOBR_RS00835 at 162.488 kb on + strand, within AZOBR_RS00835 at 162.488 kb on + strand, within AZOBR_RS00835 at 162.488 kb on + strand, within AZOBR_RS00835 at 162.488 kb on + strand, within AZOBR_RS00835 at 162.488 kb on + strand, within AZOBR_RS00835 at 162.488 kb on + strand, within AZOBR_RS00835 at 162.489 kb on - strand, within AZOBR_RS00835 at 162.545 kb on + strand, within AZOBR_RS00835 at 162.546 kb on - strand, within AZOBR_RS00835 at 162.548 kb on + strand, within AZOBR_RS00835 at 162.548 kb on + strand, within AZOBR_RS00835 at 162.548 kb on + strand, within AZOBR_RS00835 at 162.549 kb on - strand, within AZOBR_RS00835 at 162.693 kb on - strand, within AZOBR_RS00835 at 162.713 kb on + strand, within AZOBR_RS00835 at 162.785 kb on + strand at 162.785 kb on + strand at 162.786 kb on - strand at 162.914 kb on + strand at 162.914 kb on + strand at 162.914 kb on + strand at 162.914 kb on + strand at 162.915 kb on - strand at 162.915 kb on - strand at 162.915 kb on - strand at 162.981 kb on + strand at 163.203 kb on + strand, within AZOBR_RS00840 at 163.203 kb on + strand, within AZOBR_RS00840 at 163.203 kb on + strand, within AZOBR_RS00840 at 163.339 kb on - strand, within AZOBR_RS00840 at 163.339 kb on - strand, within AZOBR_RS00840 at 163.339 kb on - strand, within AZOBR_RS00840 at 163.443 kb on + strand, within AZOBR_RS00840 at 163.443 kb on + strand, within AZOBR_RS00840 at 163.443 kb on + strand, within AZOBR_RS00840 at 163.452 kb on + strand, within AZOBR_RS00840 at 163.471 kb on - strand, within AZOBR_RS00840 at 163.471 kb on - strand, within AZOBR_RS00840 at 163.471 kb on - strand, within AZOBR_RS00840 at 163.626 kb on + strand, within AZOBR_RS00840
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 161,143 - AZOBR_RS00830 0.27 -3.9 161,143 - AZOBR_RS00830 0.27 -4.2 161,256 + AZOBR_RS00830 0.37 -1.8 161,257 - AZOBR_RS00830 0.37 -2.3 161,409 + AZOBR_RS00830 0.51 -3.4 161,410 - AZOBR_RS00830 0.51 -6.0 161,410 - AZOBR_RS00830 0.51 -3.6 161,410 - AZOBR_RS00830 0.51 -5.8 162,029 + -0.4 162,029 + -0.8 162,129 - AZOBR_RS00835 0.15 -0.3 162,308 + AZOBR_RS00835 0.36 +0.1 162,308 + AZOBR_RS00835 0.36 -0.7 162,308 + AZOBR_RS00835 0.36 -0.4 162,309 - AZOBR_RS00835 0.36 +0.3 162,309 - AZOBR_RS00835 0.36 -0.3 162,455 + AZOBR_RS00835 0.53 +0.3 162,455 + AZOBR_RS00835 0.53 -0.4 162,455 + AZOBR_RS00835 0.53 -0.8 162,455 + AZOBR_RS00835 0.53 +0.4 162,455 + AZOBR_RS00835 0.53 +0.1 162,455 + AZOBR_RS00835 0.53 +0.3 162,455 + AZOBR_RS00835 0.53 -0.5 162,455 + AZOBR_RS00835 0.53 -1.6 162,456 - AZOBR_RS00835 0.53 -0.8 162,456 - AZOBR_RS00835 0.53 -0.6 162,456 - AZOBR_RS00835 0.53 -0.7 162,456 - AZOBR_RS00835 0.53 +0.6 162,456 - AZOBR_RS00835 0.53 -0.3 162,456 - AZOBR_RS00835 0.53 +0.6 162,456 - AZOBR_RS00835 0.53 -1.5 162,456 - AZOBR_RS00835 0.53 -0.0 162,456 - AZOBR_RS00835 0.53 -3.0 162,457 + AZOBR_RS00835 0.53 +0.0 162,457 + AZOBR_RS00835 0.53 -0.4 162,457 + AZOBR_RS00835 0.53 +0.8 162,457 + AZOBR_RS00835 0.53 +0.4 162,458 - AZOBR_RS00835 0.54 +0.2 162,458 - AZOBR_RS00835 0.54 -1.1 162,488 + AZOBR_RS00835 0.57 -0.2 162,488 + AZOBR_RS00835 0.57 +0.4 162,488 + AZOBR_RS00835 0.57 +0.2 162,488 + AZOBR_RS00835 0.57 -0.6 162,488 + AZOBR_RS00835 0.57 -1.5 162,488 + AZOBR_RS00835 0.57 +0.9 162,489 - AZOBR_RS00835 0.57 -0.0 162,545 + AZOBR_RS00835 0.64 +0.4 162,546 - AZOBR_RS00835 0.64 +0.2 162,548 + AZOBR_RS00835 0.64 +0.1 162,548 + AZOBR_RS00835 0.64 -0.0 162,548 + AZOBR_RS00835 0.64 -0.2 162,549 - AZOBR_RS00835 0.64 -1.9 162,693 - AZOBR_RS00835 0.81 +0.0 162,713 + AZOBR_RS00835 0.83 -0.3 162,785 + +0.1 162,785 + +1.3 162,786 - +0.8 162,914 + -0.8 162,914 + +0.4 162,914 + +0.1 162,914 + +0.0 162,915 - -0.9 162,915 - -0.7 162,915 - +0.5 162,981 + -0.4 163,203 + AZOBR_RS00840 0.20 +1.1 163,203 + AZOBR_RS00840 0.20 +0.4 163,203 + AZOBR_RS00840 0.20 -1.1 163,339 - AZOBR_RS00840 0.31 +0.3 163,339 - AZOBR_RS00840 0.31 +0.6 163,339 - AZOBR_RS00840 0.31 -0.1 163,443 + AZOBR_RS00840 0.39 -1.4 163,443 + AZOBR_RS00840 0.39 -0.4 163,443 + AZOBR_RS00840 0.39 +0.6 163,452 + AZOBR_RS00840 0.40 +0.0 163,471 - AZOBR_RS00840 0.42 -0.4 163,471 - AZOBR_RS00840 0.42 +0.2 163,471 - AZOBR_RS00840 0.42 +0.1 163,626 + AZOBR_RS00840 0.54 +0.4
Or see this region's nucleotide sequence