Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11855

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_11845 and AO353_11850 overlap by 4 nucleotidesAO353_11850 and AO353_11855 are separated by 150 nucleotidesAO353_11855 and AO353_11860 are separated by 50 nucleotides AO353_11845: AO353_11845 - ADP-ribose diphosphatase, at 2,613,754 to 2,614,320 _11845 AO353_11850: AO353_11850 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,614,317 to 2,615,153 _11850 AO353_11855: AO353_11855 - thioesterase, at 2,615,304 to 2,615,759 _11855 AO353_11860: AO353_11860 - Fis family transcriptional regulator, at 2,615,810 to 2,617,213 _11860 Position (kb) 2615 2616Strain fitness (log2 ratio) -2 -1 0 1 2at 2614.681 kb on + strand, within AO353_11850at 2614.681 kb on + strand, within AO353_11850at 2614.682 kb on - strand, within AO353_11850at 2614.710 kb on + strand, within AO353_11850at 2614.710 kb on + strand, within AO353_11850at 2614.710 kb on + strand, within AO353_11850at 2614.710 kb on + strand, within AO353_11850at 2614.711 kb on - strand, within AO353_11850at 2614.786 kb on + strand, within AO353_11850at 2614.787 kb on - strand, within AO353_11850at 2614.787 kb on - strand, within AO353_11850at 2614.787 kb on - strand, within AO353_11850at 2614.787 kb on - strand, within AO353_11850at 2614.787 kb on - strand, within AO353_11850at 2614.787 kb on - strand, within AO353_11850at 2615.059 kb on - strand, within AO353_11850at 2615.210 kb on + strandat 2615.213 kb on + strandat 2615.213 kb on + strandat 2615.213 kb on + strandat 2615.213 kb on + strandat 2615.213 kb on + strandat 2615.213 kb on + strandat 2615.230 kb on - strandat 2615.257 kb on - strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.320 kb on + strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.321 kb on - strandat 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.375 kb on + strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.376 kb on - strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.410 kb on + strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.411 kb on - strand, within AO353_11855at 2615.593 kb on + strand, within AO353_11855at 2615.593 kb on + strand, within AO353_11855at 2615.593 kb on + strand, within AO353_11855at 2615.594 kb on - strand, within AO353_11855at 2615.594 kb on - strand, within AO353_11855at 2615.594 kb on - strand, within AO353_11855at 2615.594 kb on - strand, within AO353_11855at 2615.658 kb on + strand, within AO353_11855at 2615.658 kb on + strand, within AO353_11855at 2615.658 kb on + strand, within AO353_11855at 2615.659 kb on - strand, within AO353_11855at 2615.659 kb on - strand, within AO353_11855at 2615.659 kb on - strand, within AO353_11855at 2615.659 kb on - strand, within AO353_11855at 2615.659 kb on - strand, within AO353_11855at 2615.659 kb on - strand, within AO353_11855at 2615.682 kb on + strand, within AO353_11855at 2615.683 kb on - strand, within AO353_11855at 2615.683 kb on - strand, within AO353_11855at 2615.696 kb on + strand, within AO353_11855at 2616.019 kb on + strand, within AO353_11860at 2616.019 kb on + strand, within AO353_11860at 2616.019 kb on + strand, within AO353_11860at 2616.019 kb on + strand, within AO353_11860at 2616.019 kb on + strand, within AO353_11860at 2616.019 kb on + strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.020 kb on - strand, within AO353_11860at 2616.288 kb on + strand, within AO353_11860at 2616.289 kb on - strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.291 kb on + strand, within AO353_11860at 2616.292 kb on - strand, within AO353_11860at 2616.292 kb on - strand, within AO353_11860at 2616.292 kb on - strand, within AO353_11860at 2616.292 kb on - strand, within AO353_11860at 2616.292 kb on - strand, within AO353_11860at 2616.533 kb on - strand, within AO353_11860

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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2,614,681 + AO353_11850 0.43 -2.5
2,614,681 + AO353_11850 0.43 -1.9
2,614,682 - AO353_11850 0.44 -2.7
2,614,710 + AO353_11850 0.47 -2.5
2,614,710 + AO353_11850 0.47 -2.4
2,614,710 + AO353_11850 0.47 -1.0
2,614,710 + AO353_11850 0.47 -0.7
2,614,711 - AO353_11850 0.47 -1.7
2,614,786 + AO353_11850 0.56 +0.0
2,614,787 - AO353_11850 0.56 -0.6
2,614,787 - AO353_11850 0.56 -1.0
2,614,787 - AO353_11850 0.56 -0.6
2,614,787 - AO353_11850 0.56 -1.0
2,614,787 - AO353_11850 0.56 +0.0
2,614,787 - AO353_11850 0.56 -0.8
2,615,059 - AO353_11850 0.89 -1.7
2,615,210 + -0.2
2,615,213 + +0.4
2,615,213 + +0.8
2,615,213 + -1.1
2,615,213 + -0.2
2,615,213 + +0.1
2,615,213 + +0.9
2,615,230 - +2.0
2,615,257 - -1.4
2,615,320 + -0.5
2,615,320 + -1.9
2,615,320 + +0.6
2,615,320 + +1.0
2,615,320 + -1.0
2,615,320 + +0.7
2,615,320 + +1.0
2,615,320 + +0.7
2,615,320 + -0.4
2,615,321 - +0.4
2,615,321 - -0.2
2,615,321 - +0.0
2,615,321 - -0.4
2,615,321 - +0.2
2,615,321 - -0.2
2,615,321 - +0.2
2,615,321 - +0.8
2,615,321 - -1.0
2,615,321 - +0.0
2,615,321 - -1.6
2,615,321 - +1.2
2,615,321 - +1.0
2,615,321 - +1.4
2,615,321 - +0.0
2,615,375 + AO353_11855 0.16 -0.5
2,615,375 + AO353_11855 0.16 +0.3
2,615,375 + AO353_11855 0.16 +0.1
2,615,375 + AO353_11855 0.16 +0.1
2,615,375 + AO353_11855 0.16 +0.2
2,615,375 + AO353_11855 0.16 +0.3
2,615,375 + AO353_11855 0.16 +2.0
2,615,375 + AO353_11855 0.16 +1.2
2,615,375 + AO353_11855 0.16 +0.7
2,615,375 + AO353_11855 0.16 -0.8
2,615,375 + AO353_11855 0.16 +1.4
2,615,375 + AO353_11855 0.16 +0.0
2,615,375 + AO353_11855 0.16 -0.4
2,615,375 + AO353_11855 0.16 +0.5
2,615,375 + AO353_11855 0.16 +0.1
2,615,376 - AO353_11855 0.16 -2.2
2,615,376 - AO353_11855 0.16 +1.2
2,615,376 - AO353_11855 0.16 +0.8
2,615,376 - AO353_11855 0.16 -1.5
2,615,376 - AO353_11855 0.16 -0.4
2,615,376 - AO353_11855 0.16 -0.6
2,615,376 - AO353_11855 0.16 +0.6
2,615,376 - AO353_11855 0.16 +1.3
2,615,376 - AO353_11855 0.16 -0.1
2,615,376 - AO353_11855 0.16 +1.8
2,615,376 - AO353_11855 0.16 +0.0
2,615,376 - AO353_11855 0.16 -0.1
2,615,376 - AO353_11855 0.16 +0.3
2,615,410 + AO353_11855 0.23 +0.3
2,615,410 + AO353_11855 0.23 +2.0
2,615,410 + AO353_11855 0.23 +0.8
2,615,410 + AO353_11855 0.23 -0.2
2,615,410 + AO353_11855 0.23 -0.6
2,615,410 + AO353_11855 0.23 -1.3
2,615,410 + AO353_11855 0.23 -0.6
2,615,411 - AO353_11855 0.23 -0.7
2,615,411 - AO353_11855 0.23 +0.2
2,615,411 - AO353_11855 0.23 +0.3
2,615,411 - AO353_11855 0.23 -1.4
2,615,411 - AO353_11855 0.23 +1.1
2,615,411 - AO353_11855 0.23 +1.4
2,615,411 - AO353_11855 0.23 +0.2
2,615,411 - AO353_11855 0.23 +0.1
2,615,411 - AO353_11855 0.23 +1.0
2,615,593 + AO353_11855 0.63 +0.4
2,615,593 + AO353_11855 0.63 +0.2
2,615,593 + AO353_11855 0.63 -0.8
2,615,594 - AO353_11855 0.64 -0.5
2,615,594 - AO353_11855 0.64 -0.1
2,615,594 - AO353_11855 0.64 +0.1
2,615,594 - AO353_11855 0.64 +0.1
2,615,658 + AO353_11855 0.78 +0.7
2,615,658 + AO353_11855 0.78 +1.0
2,615,658 + AO353_11855 0.78 -0.4
2,615,659 - AO353_11855 0.78 +1.0
2,615,659 - AO353_11855 0.78 +0.7
2,615,659 - AO353_11855 0.78 +0.2
2,615,659 - AO353_11855 0.78 +0.4
2,615,659 - AO353_11855 0.78 +0.7
2,615,659 - AO353_11855 0.78 +1.5
2,615,682 + AO353_11855 0.83 +0.4
2,615,683 - AO353_11855 0.83 -0.6
2,615,683 - AO353_11855 0.83 +0.8
2,615,696 + AO353_11855 0.86 +0.4
2,616,019 + AO353_11860 0.15 +1.0
2,616,019 + AO353_11860 0.15 -0.6
2,616,019 + AO353_11860 0.15 +0.3
2,616,019 + AO353_11860 0.15 +1.9
2,616,019 + AO353_11860 0.15 -0.4
2,616,019 + AO353_11860 0.15 -0.9
2,616,020 - AO353_11860 0.15 -1.0
2,616,020 - AO353_11860 0.15 +0.7
2,616,020 - AO353_11860 0.15 -0.6
2,616,020 - AO353_11860 0.15 +0.1
2,616,020 - AO353_11860 0.15 +2.0
2,616,020 - AO353_11860 0.15 +0.5
2,616,020 - AO353_11860 0.15 +1.0
2,616,288 + AO353_11860 0.34 +0.0
2,616,289 - AO353_11860 0.34 -1.0
2,616,291 + AO353_11860 0.34 +1.8
2,616,291 + AO353_11860 0.34 +1.6
2,616,291 + AO353_11860 0.34 +1.4
2,616,291 + AO353_11860 0.34 -1.5
2,616,291 + AO353_11860 0.34 -0.5
2,616,291 + AO353_11860 0.34 -1.5
2,616,291 + AO353_11860 0.34 +0.2
2,616,291 + AO353_11860 0.34 +1.2
2,616,291 + AO353_11860 0.34 -0.9
2,616,291 + AO353_11860 0.34 -1.0
2,616,292 - AO353_11860 0.34 -0.1
2,616,292 - AO353_11860 0.34 -0.8
2,616,292 - AO353_11860 0.34 -0.9
2,616,292 - AO353_11860 0.34 +0.0
2,616,292 - AO353_11860 0.34 -0.3
2,616,533 - AO353_11860 0.51 +0.0

Or see this region's nucleotide sequence