Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03010

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03005 and AO353_03010 are separated by 128 nucleotidesAO353_03010 and AO353_03015 overlap by 1 nucleotides AO353_03005: AO353_03005 - succinylarginine dihydrolase, at 636,583 to 637,929 _03005 AO353_03010: AO353_03010 - succinylglutamate-semialdehyde dehydrogenase, at 638,058 to 639,521 _03010 AO353_03015: AO353_03015 - arginine N-succinyltransferase, at 639,521 to 640,546 _03015 Position (kb) 638 639 640Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 637.139 kb on + strand, within AO353_03005at 637.139 kb on + strand, within AO353_03005at 637.140 kb on - strand, within AO353_03005at 637.298 kb on + strand, within AO353_03005at 637.524 kb on - strand, within AO353_03005at 637.524 kb on - strand, within AO353_03005at 637.573 kb on - strand, within AO353_03005at 637.862 kb on + strandat 637.877 kb on + strandat 637.877 kb on + strandat 637.877 kb on + strandat 637.877 kb on + strandat 637.881 kb on + strandat 637.897 kb on + strandat 637.897 kb on + strandat 637.919 kb on + strandat 637.919 kb on + strandat 637.919 kb on + strandat 637.919 kb on + strandat 637.920 kb on - strandat 637.920 kb on - strandat 637.920 kb on - strandat 637.957 kb on + strandat 637.957 kb on + strandat 637.957 kb on + strandat 637.958 kb on - strandat 637.958 kb on - strandat 637.958 kb on - strandat 637.959 kb on + strandat 637.960 kb on - strandat 637.960 kb on - strandat 637.960 kb on - strandat 637.960 kb on - strandat 637.960 kb on - strandat 638.007 kb on + strandat 638.007 kb on + strandat 638.007 kb on + strandat 638.007 kb on + strandat 638.007 kb on + strandat 638.007 kb on + strandat 638.008 kb on - strandat 638.008 kb on - strandat 638.008 kb on - strandat 638.016 kb on + strandat 638.016 kb on + strandat 638.016 kb on + strandat 638.016 kb on + strandat 638.017 kb on - strandat 638.017 kb on - strandat 638.017 kb on - strandat 638.030 kb on - strandat 638.030 kb on - strandat 638.030 kb on - strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.037 kb on + strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.038 kb on - strandat 638.059 kb on + strandat 638.059 kb on + strandat 638.059 kb on + strandat 638.059 kb on + strandat 638.059 kb on + strandat 638.060 kb on - strandat 638.060 kb on - strandat 638.060 kb on - strandat 638.060 kb on - strandat 638.060 kb on - strandat 638.138 kb on - strandat 638.149 kb on + strandat 638.149 kb on + strandat 638.149 kb on + strandat 638.150 kb on - strandat 638.150 kb on - strandat 638.152 kb on + strandat 638.152 kb on + strandat 638.153 kb on - strandat 638.153 kb on - strandat 638.317 kb on + strand, within AO353_03010at 638.723 kb on + strand, within AO353_03010at 638.724 kb on - strand, within AO353_03010at 638.731 kb on + strand, within AO353_03010at 638.732 kb on - strand, within AO353_03010at 638.732 kb on - strand, within AO353_03010at 638.732 kb on - strand, within AO353_03010at 638.928 kb on + strand, within AO353_03010at 638.928 kb on + strand, within AO353_03010at 638.929 kb on - strand, within AO353_03010at 638.929 kb on - strand, within AO353_03010at 638.929 kb on - strand, within AO353_03010at 639.088 kb on + strand, within AO353_03010at 639.088 kb on + strand, within AO353_03010at 639.088 kb on + strand, within AO353_03010at 639.089 kb on - strand, within AO353_03010at 639.089 kb on - strand, within AO353_03010at 639.089 kb on - strand, within AO353_03010at 639.200 kb on + strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.201 kb on - strand, within AO353_03010at 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.508 kb on + strandat 639.509 kb on - strandat 639.509 kb on - strandat 639.522 kb on + strandat 639.522 kb on + strandat 639.523 kb on - strandat 639.523 kb on - strandat 639.523 kb on - strandat 639.560 kb on + strandat 639.560 kb on + strandat 639.560 kb on + strandat 639.560 kb on + strandat 639.561 kb on - strandat 639.561 kb on - strandat 639.561 kb on - strandat 639.807 kb on + strand, within AO353_03015at 639.808 kb on - strand, within AO353_03015at 639.915 kb on + strand, within AO353_03015at 639.915 kb on + strand, within AO353_03015at 639.915 kb on + strand, within AO353_03015at 639.916 kb on - strand, within AO353_03015at 639.916 kb on - strand, within AO353_03015at 640.243 kb on - strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.377 kb on + strand, within AO353_03015at 640.378 kb on - strand, within AO353_03015at 640.378 kb on - strand, within AO353_03015

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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637,139 + AO353_03005 0.41 -1.9
637,139 + AO353_03005 0.41 -3.0
637,140 - AO353_03005 0.41 -2.4
637,298 + AO353_03005 0.53 +0.2
637,524 - AO353_03005 0.70 -4.0
637,524 - AO353_03005 0.70 -1.2
637,573 - AO353_03005 0.73 -3.0
637,862 + -1.8
637,877 + -1.4
637,877 + -0.4
637,877 + -2.3
637,877 + -2.1
637,881 + -1.4
637,897 + -1.0
637,897 + -4.0
637,919 + -1.6
637,919 + -3.1
637,919 + -3.4
637,919 + -2.7
637,920 - -1.8
637,920 - -2.5
637,920 - -2.1
637,957 + -2.5
637,957 + -4.0
637,957 + -1.6
637,958 - -3.0
637,958 - -1.2
637,958 - -2.8
637,959 + -3.1
637,960 - +1.1
637,960 - -2.1
637,960 - -1.2
637,960 - -1.0
637,960 - -2.7
638,007 + -3.0
638,007 + -2.2
638,007 + -3.6
638,007 + -0.0
638,007 + -4.1
638,007 + -2.6
638,008 - -2.8
638,008 - -3.1
638,008 - -0.4
638,016 + -2.7
638,016 + -1.4
638,016 + -1.8
638,016 + -0.0
638,017 - -2.2
638,017 - -2.9
638,017 - -1.9
638,030 - -0.4
638,030 - -1.6
638,030 - -0.4
638,037 + -1.4
638,037 + -0.5
638,037 + -3.6
638,037 + -1.9
638,037 + -2.0
638,037 + -2.1
638,037 + -3.8
638,037 + -0.4
638,038 - -3.2
638,038 - -4.2
638,038 - -2.7
638,038 - -3.4
638,038 - -1.0
638,038 - -3.8
638,038 - -1.6
638,038 - -1.0
638,038 - -1.0
638,038 - -3.2
638,038 - -1.6
638,038 - -0.4
638,038 - -1.0
638,038 - -1.4
638,038 - -1.1
638,059 + -1.6
638,059 + -2.8
638,059 + -3.2
638,059 + -2.2
638,059 + -2.3
638,060 - +0.8
638,060 - -1.6
638,060 - -1.6
638,060 - -3.6
638,060 - -2.3
638,138 - -2.9
638,149 + -3.4
638,149 + -2.8
638,149 + -2.2
638,150 - -0.4
638,150 - -3.2
638,152 + -2.1
638,152 + -1.4
638,153 - -1.9
638,153 - -1.6
638,317 + AO353_03010 0.18 -3.4
638,723 + AO353_03010 0.45 -3.1
638,724 - AO353_03010 0.45 -1.6
638,731 + AO353_03010 0.46 -2.6
638,732 - AO353_03010 0.46 -1.8
638,732 - AO353_03010 0.46 -1.1
638,732 - AO353_03010 0.46 -2.5
638,928 + AO353_03010 0.59 -0.7
638,928 + AO353_03010 0.59 -3.6
638,929 - AO353_03010 0.59 -2.0
638,929 - AO353_03010 0.59 -3.2
638,929 - AO353_03010 0.59 -1.8
639,088 + AO353_03010 0.70 -1.6
639,088 + AO353_03010 0.70 -3.5
639,088 + AO353_03010 0.70 -2.3
639,089 - AO353_03010 0.70 -1.8
639,089 - AO353_03010 0.70 -3.1
639,089 - AO353_03010 0.70 -1.6
639,200 + AO353_03010 0.78 -3.4
639,201 - AO353_03010 0.78 -0.4
639,201 - AO353_03010 0.78 -1.8
639,201 - AO353_03010 0.78 +0.2
639,201 - AO353_03010 0.78 -0.4
639,201 - AO353_03010 0.78 -0.8
639,508 + -1.2
639,508 + -0.7
639,508 + -1.2
639,508 + -1.8
639,508 + -3.0
639,508 + +1.6
639,508 + -2.0
639,508 + -0.0
639,508 + -1.4
639,508 + -0.8
639,509 - -2.8
639,509 - -1.9
639,522 + -1.4
639,522 + -1.6
639,523 - -3.6
639,523 - -2.1
639,523 - -2.0
639,560 + -1.2
639,560 + -1.0
639,560 + -1.8
639,560 + -3.2
639,561 - -0.8
639,561 - -3.0
639,561 - -0.8
639,807 + AO353_03015 0.28 -1.9
639,808 - AO353_03015 0.28 -0.0
639,915 + AO353_03015 0.38 -1.4
639,915 + AO353_03015 0.38 -2.5
639,915 + AO353_03015 0.38 -0.4
639,916 - AO353_03015 0.38 -1.4
639,916 - AO353_03015 0.38 -1.9
640,243 - AO353_03015 0.70 -2.0
640,377 + AO353_03015 0.83 -3.3
640,377 + AO353_03015 0.83 +1.6
640,377 + AO353_03015 0.83 -2.7
640,377 + AO353_03015 0.83 -2.5
640,377 + AO353_03015 0.83 -2.8
640,378 - AO353_03015 0.84 -1.1
640,378 - AO353_03015 0.84 -0.0

Or see this region's nucleotide sequence