Experiment: MoYLS4 with Chloride 125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2749 and DvMF_2750 are separated by 475 nucleotides DvMF_2750 and DvMF_2751 are separated by 314 nucleotides
DvMF_2749: DvMF_2749 - hypothetical protein (RefSeq), at 3,474,091 to 3,474,687
_2749
DvMF_2750: DvMF_2750 - Extracellular ligand-binding receptor (RefSeq), at 3,475,163 to 3,476,290
_2750
DvMF_2751: DvMF_2751 - inner-membrane translocator (RefSeq), at 3,476,605 to 3,477,510
_2751
Position (kb)
3475
3476
3477 Strain fitness (log2 ratio)
-1
0
1 at 3474.412 kb on - strand, within DvMF_2749 at 3474.541 kb on - strand, within DvMF_2749 at 3474.631 kb on - strand at 3474.633 kb on + strand at 3474.633 kb on + strand at 3474.649 kb on - strand at 3474.867 kb on - strand at 3475.079 kb on + strand at 3475.128 kb on + strand at 3475.163 kb on - strand at 3475.404 kb on + strand, within DvMF_2750 at 3475.752 kb on + strand, within DvMF_2750 at 3475.760 kb on - strand, within DvMF_2750 at 3475.760 kb on - strand, within DvMF_2750 at 3475.779 kb on + strand, within DvMF_2750 at 3475.832 kb on + strand, within DvMF_2750 at 3475.989 kb on - strand, within DvMF_2750 at 3476.052 kb on - strand, within DvMF_2750 at 3476.056 kb on + strand, within DvMF_2750 at 3476.078 kb on - strand, within DvMF_2750 at 3476.166 kb on - strand, within DvMF_2750 at 3476.293 kb on + strand at 3476.309 kb on - strand at 3476.416 kb on + strand at 3476.513 kb on + strand at 3476.529 kb on + strand at 3476.554 kb on - strand at 3476.591 kb on + strand at 3476.673 kb on + strand at 3476.673 kb on + strand at 3476.681 kb on - strand at 3476.681 kb on - strand at 3476.685 kb on + strand at 3476.693 kb on - strand at 3476.823 kb on + strand, within DvMF_2751 at 3476.987 kb on - strand, within DvMF_2751 at 3477.011 kb on + strand, within DvMF_2751 at 3477.101 kb on + strand, within DvMF_2751 at 3477.128 kb on + strand, within DvMF_2751 at 3477.226 kb on - strand, within DvMF_2751 at 3477.250 kb on - strand, within DvMF_2751 at 3477.250 kb on - strand, within DvMF_2751
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chloride 125 mM remove 3,474,412 - DvMF_2749 0.54 -0.2 3,474,541 - DvMF_2749 0.75 -0.2 3,474,631 - -0.6 3,474,633 + -0.3 3,474,633 + -0.2 3,474,649 - -0.3 3,474,867 - -1.0 3,475,079 + -0.6 3,475,128 + -0.4 3,475,163 - -0.2 3,475,404 + DvMF_2750 0.21 +0.3 3,475,752 + DvMF_2750 0.52 +0.1 3,475,760 - DvMF_2750 0.53 +0.3 3,475,760 - DvMF_2750 0.53 -0.3 3,475,779 + DvMF_2750 0.55 -0.1 3,475,832 + DvMF_2750 0.59 -0.1 3,475,989 - DvMF_2750 0.73 +0.0 3,476,052 - DvMF_2750 0.79 -0.3 3,476,056 + DvMF_2750 0.79 +0.0 3,476,078 - DvMF_2750 0.81 -0.4 3,476,166 - DvMF_2750 0.89 -0.3 3,476,293 + -0.5 3,476,309 - -0.4 3,476,416 + -0.4 3,476,513 + -0.2 3,476,529 + -0.1 3,476,554 - +0.4 3,476,591 + +0.1 3,476,673 + -0.2 3,476,673 + -0.1 3,476,681 - -0.1 3,476,681 - +0.0 3,476,685 + -0.2 3,476,693 - -0.1 3,476,823 + DvMF_2751 0.24 -0.9 3,476,987 - DvMF_2751 0.42 +0.2 3,477,011 + DvMF_2751 0.45 +0.3 3,477,101 + DvMF_2751 0.55 -0.1 3,477,128 + DvMF_2751 0.58 +0.8 3,477,226 - DvMF_2751 0.69 +0.1 3,477,250 - DvMF_2751 0.71 +0.7 3,477,250 - DvMF_2751 0.71 -0.8
Or see this region's nucleotide sequence