Strain Fitness in Shewanella loihica PV-4 around Shew_1469

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
1,692,334	-				+0.8
1,692,338	+				+0.8
1,692,341	-				-1.6
1,692,343	+				+0.6
1,692,349	+				+2.3
1,692,362	+				+0.4
1,692,362	+				-0.1
1,692,362	+				+0.0
1,692,384	+				-0.6
1,692,485	-				-0.2
1,692,513	+				+0.3
1,692,513	+				+0.8
1,692,515	-				-1.4
1,692,521	-				-2.5
1,692,521	-				-1.2
1,692,521	-				-0.7
1,692,572	-				+2.0
1,692,620	+				+1.1
1,692,620	+				+1.4
1,692,620	+				-2.0
1,692,620	+				-0.4
1,692,637	+				-2.6
1,692,642	+				+0.5
1,692,642	+				+2.1
1,692,642	+				+0.0
1,692,642	+				-2.1
1,692,650	-				+1.3
1,692,650	-				-2.3
1,692,650	-				-0.9
1,692,769	+		Shew_1468	0.18	-0.3
1,692,801	+		Shew_1468	0.23	+0.5
1,692,813	+		Shew_1468	0.25	+1.7
1,692,821	-		Shew_1468	0.27	+0.6
1,692,821	-		Shew_1468	0.27	+2.5
1,692,821	-		Shew_1468	0.27	+0.0
1,692,821	-		Shew_1468	0.27	-3.5
1,692,821	-		Shew_1468	0.27	-0.5
1,692,846	+		Shew_1468	0.31	+1.4
1,692,853	-		Shew_1468	0.32	+0.9
1,692,857	+		Shew_1468	0.33	-1.7
1,692,911	-		Shew_1468	0.42	+1.0
1,692,922	+		Shew_1468	0.44	+1.0
1,692,927	+		Shew_1468	0.45	+2.4
1,692,989	+		Shew_1468	0.56	-2.2
1,692,991	+		Shew_1468	0.56	+0.4
1,692,996	+		Shew_1468	0.57	+0.2
1,693,002	+		Shew_1468	0.58	+0.4
1,693,006	+		Shew_1468	0.58	-1.0
1,693,040	+		Shew_1468	0.64	-1.3
1,693,040	+		Shew_1468	0.64	+2.2
1,693,054	+		Shew_1468	0.67	-0.3
1,693,059	+		Shew_1468	0.68	+2.4
1,693,059	+		Shew_1468	0.68	+0.0
1,693,059	+		Shew_1468	0.68	+0.4
1,693,059	+		Shew_1468	0.68	-0.2
1,693,059	+		Shew_1468	0.68	-2.3
1,693,059	+		Shew_1468	0.68	-2.6
1,693,059	+		Shew_1468	0.68	-1.6
1,693,060	-		Shew_1468	0.68	-1.1
1,693,060	-		Shew_1468	0.68	+0.6
1,693,060	-		Shew_1468	0.68	+1.5
1,693,067	-		Shew_1468	0.69	-1.0
1,693,067	-		Shew_1468	0.69	+1.1
1,693,067	-		Shew_1468	0.69	+0.0
1,693,067	-		Shew_1468	0.69	-0.2
1,693,074	+		Shew_1468	0.70	+2.1
1,693,074	+		Shew_1468	0.70	-1.4
1,693,074	+		Shew_1468	0.70	+1.3
1,693,082	-		Shew_1468	0.71	+0.9
1,693,084	+		Shew_1468	0.72	-1.6
1,693,146	+		Shew_1468	0.82	-0.6
1,693,154	-		Shew_1468	0.84	+0.3
1,693,198	-				+0.1
1,693,225	-				-1.0
1,693,241	+				+1.0
1,693,249	+				+0.7
1,693,249	+				-0.8
1,693,257	-				+3.6
1,693,264	+				-0.3
1,693,274	+				+0.6
1,693,279	-				-0.2
1,693,279	-				+1.0
1,693,281	+				+0.0
1,693,283	+				-3.0
1,693,283	+				+0.1
1,693,283	+				+1.0
1,693,283	+				-0.7
1,693,283	+				+2.2
1,693,283	+				+1.5
1,693,283	+				-0.9
1,693,289	-				+1.3
1,693,291	-				-2.3
1,693,291	+				-0.5
1,693,292	+				+1.9
1,693,292	+				-0.3
1,693,300	+				-0.2
1,693,330	-				+0.0
1,693,330	-				+1.8
1,693,347	-				+3.1
1,693,421	+				-1.7
1,693,421	+				+2.4
1,693,421	+				+0.8
1,693,421	+				+1.3
1,693,421	+				+0.8
1,693,421	+				+0.6
1,693,421	+				+0.0
1,693,421	+				+0.7
1,693,429	-				+2.8
1,693,429	-				+2.9
1,693,429	-				+0.0
1,693,429	-				+2.2
1,693,429	-				+1.1
1,693,429	-				+2.0
1,693,429	-				-2.6
1,693,429	-				+2.3
1,693,452	+				-0.4
1,693,475	-				+0.4
1,693,477	+				+0.9
1,693,485	-		Shew_1469	0.10	+1.4
1,693,495	-		Shew_1469	0.11	+0.0
1,693,495	-		Shew_1469	0.11	+1.6
1,693,525	+		Shew_1469	0.13	-1.3
1,693,533	-		Shew_1469	0.13	+1.0
1,693,541	+		Shew_1469	0.14	+0.5
1,693,546	+		Shew_1469	0.14	+1.6
1,693,546	+		Shew_1469	0.14	-0.3
1,693,546	+		Shew_1469	0.14	+1.0
1,693,546	+		Shew_1469	0.14	-0.2
1,693,549	-		Shew_1469	0.14	+1.6
1,693,549	-		Shew_1469	0.14	-0.6
1,693,549	-		Shew_1469	0.14	+1.2
1,693,549	-		Shew_1469	0.14	+2.5
1,693,554	+		Shew_1469	0.15	+0.0
1,693,554	-		Shew_1469	0.15	-1.0
1,693,562	+		Shew_1469	0.15	+0.5
1,693,569	-		Shew_1469	0.15	+0.0
1,693,586	+		Shew_1469	0.16	+0.3
1,693,593	+		Shew_1469	0.17	-0.5
1,693,594	-		Shew_1469	0.17	+1.2
1,693,599	-		Shew_1469	0.17	+4.5
1,693,601	-		Shew_1469	0.17	+1.0
1,693,608	-		Shew_1469	0.18	+0.8
1,693,647	+		Shew_1469	0.20	+0.0
1,693,676	+		Shew_1469	0.22	-0.4
1,693,676	+		Shew_1469	0.22	+1.8
1,693,681	+		Shew_1469	0.22	+0.6
1,693,681	+		Shew_1469	0.22	-2.0
1,693,684	-		Shew_1469	0.22	-0.6
1,693,689	-		Shew_1469	0.23	+1.1
1,693,691	+		Shew_1469	0.23	-0.7
1,693,705	+		Shew_1469	0.24	+1.4
1,693,724	-		Shew_1469	0.25	-0.2
1,693,778	+		Shew_1469	0.28	+1.3
1,693,819	+		Shew_1469	0.31	-0.6
1,693,819	+		Shew_1469	0.31	-0.2
1,693,819	+		Shew_1469	0.31	+0.3
1,693,827	-		Shew_1469	0.31	+2.2
1,693,827	-		Shew_1469	0.31	+1.5
1,693,828	-		Shew_1469	0.31	-1.6
1,693,832	+		Shew_1469	0.32	+2.8
1,693,832	+		Shew_1469	0.32	-0.3
1,693,832	+		Shew_1469	0.32	+0.0
1,693,840	-		Shew_1469	0.32	+1.0
1,693,840	-		Shew_1469	0.32	+1.2
1,693,840	-		Shew_1469	0.32	+0.8
1,693,840	-		Shew_1469	0.32	+1.4
1,693,854	+		Shew_1469	0.33	+1.7
1,693,854	+		Shew_1469	0.33	+0.8
1,693,862	-		Shew_1469	0.33	+0.0
1,693,894	+		Shew_1469	0.35	+0.4
1,693,894	+		Shew_1469	0.35	+0.4
1,693,894	+		Shew_1469	0.35	+1.1
1,693,934	-		Shew_1469	0.38	+0.2
1,693,941	+		Shew_1469	0.38	+0.2
1,693,945	+		Shew_1469	0.38	+1.5
1,693,957	-		Shew_1469	0.39	-2.0
1,694,022	-		Shew_1469	0.43	+0.0
1,694,069	+		Shew_1469	0.46	+0.0
1,694,076	+		Shew_1469	0.47	+0.7
1,694,076	+		Shew_1469	0.47	+1.8
1,694,117	+		Shew_1469	0.49	+1.3
1,694,132	-		Shew_1469	0.50	+1.1
1,694,139	+		Shew_1469	0.50	-2.0
1,694,147	-		Shew_1469	0.51	-1.6
1,694,205	+		Shew_1469	0.54	-0.6
1,694,221	+		Shew_1469	0.55	+1.4
1,694,221	+		Shew_1469	0.55	+0.5
1,694,221	+		Shew_1469	0.55	-1.6
1,694,224	-		Shew_1469	0.56	+3.5
1,694,226	+		Shew_1469	0.56	-0.3
1,694,231	+		Shew_1469	0.56	+0.4
1,694,231	+		Shew_1469	0.56	+1.5
1,694,239	-		Shew_1469	0.56	+1.9
1,694,239	-		Shew_1469	0.56	+1.6
1,694,239	-		Shew_1469	0.56	+1.4
1,694,239	-		Shew_1469	0.56	+1.6
1,694,241	+		Shew_1469	0.57	-2.0
1,694,241	+		Shew_1469	0.57	+0.5
1,694,241	+		Shew_1469	0.57	-1.6
1,694,253	+		Shew_1469	0.57	-2.6
1,694,253	+		Shew_1469	0.57	+0.0
1,694,253	+		Shew_1469	0.57	+0.8
1,694,261	-		Shew_1469	0.58	+2.9
1,694,261	-		Shew_1469	0.58	+2.2
1,694,271	-		Shew_1469	0.58	+0.5
1,694,271	-		Shew_1469	0.58	+1.6
1,694,271	-		Shew_1469	0.58	+0.0
1,694,316	+		Shew_1469	0.61	+1.6
1,694,316	+		Shew_1469	0.61	+1.6
1,694,331	+		Shew_1469	0.62	-0.3
1,694,333	+		Shew_1469	0.62	-1.3
1,694,343	+		Shew_1469	0.63	-0.1
1,694,369	+		Shew_1469	0.64	+0.2
1,694,391	-		Shew_1469	0.66	+3.5
1,694,393	+		Shew_1469	0.66	+0.4
1,694,410	-		Shew_1469	0.67	+2.1
1,694,467	-		Shew_1469	0.70	+2.0
1,694,467	-		Shew_1469	0.70	+3.0
1,694,478	+		Shew_1469	0.71	+3.0
1,694,478	+		Shew_1469	0.71	-1.0
1,694,479	-		Shew_1469	0.71	+1.2
1,694,483	+		Shew_1469	0.71	+0.9
1,694,483	+		Shew_1469	0.71	+0.3
1,694,483	+		Shew_1469	0.71	+0.8
1,694,483	+		Shew_1469	0.71	+1.4
1,694,483	+		Shew_1469	0.71	+0.6
1,694,483	+		Shew_1469	0.71	+0.8
1,694,483	+		Shew_1469	0.71	-0.6
1,694,483	+		Shew_1469	0.71	-1.0
1,694,483	+		Shew_1469	0.71	-0.7
1,694,483	+		Shew_1469	0.71	-1.2
1,694,483	+		Shew_1469	0.71	-1.0
1,694,483	+		Shew_1469	0.71	+0.3
1,694,483	+		Shew_1469	0.71	+0.9
1,694,483	+		Shew_1469	0.71	+0.6
1,694,483	+		Shew_1469	0.71	-2.6
1,694,483	+		Shew_1469	0.71	+0.6
1,694,483	+		Shew_1469	0.71	+1.0
1,694,483	+		Shew_1469	0.71	-3.2
1,694,483	+		Shew_1469	0.71	+0.8
1,694,486	-		Shew_1469	0.72	+3.2
1,694,486	-		Shew_1469	0.72	-0.5
1,694,488	+		Shew_1469	0.72	+0.3
1,694,491	-		Shew_1469	0.72	+0.0
1,694,491	-		Shew_1469	0.72	-2.3
1,694,491	-		Shew_1469	0.72	+0.9
1,694,491	-		Shew_1469	0.72	+0.6
1,694,491	-		Shew_1469	0.72	+2.5
1,694,491	-		Shew_1469	0.72	+1.1
1,694,491	-		Shew_1469	0.72	+1.2
1,694,491	-		Shew_1469	0.72	+1.8
1,694,491	-		Shew_1469	0.72	-0.4
1,694,491	-		Shew_1469	0.72	+1.5
1,694,491	-		Shew_1469	0.72	+1.8
1,694,491	-		Shew_1469	0.72	+1.8
1,694,491	-		Shew_1469	0.72	+1.3
1,694,491	-		Shew_1469	0.72	+1.8
1,694,544	+		Shew_1469	0.75	+1.1
1,694,559	+		Shew_1469	0.76	+1.7
1,694,559	+		Shew_1469	0.76	+1.1
1,694,559	+		Shew_1469	0.76	+0.4
1,694,559	+		Shew_1469	0.76	+0.3
1,694,559	+		Shew_1469	0.76	-0.8
1,694,566	+		Shew_1469	0.77	-0.4
1,694,566	+		Shew_1469	0.77	+1.9
1,694,566	+		Shew_1469	0.77	-1.8
1,694,567	-		Shew_1469	0.77	+2.1
1,694,567	-		Shew_1469	0.77	+0.6
1,694,567	-		Shew_1469	0.77	+0.7
1,694,574	-		Shew_1469	0.77	+1.4
1,694,576	+		Shew_1469	0.77	-2.3
1,694,576	+		Shew_1469	0.77	+0.3
1,694,576	+		Shew_1469	0.77	+0.5
1,694,576	+		Shew_1469	0.77	+0.5
1,694,581	+		Shew_1469	0.77	+0.4
1,694,581	+		Shew_1469	0.77	+0.6
1,694,584	-		Shew_1469	0.78	+1.3
1,694,584	-		Shew_1469	0.78	+1.0
1,694,584	-		Shew_1469	0.78	-1.6
1,694,584	-		Shew_1469	0.78	-0.3
1,694,622	+		Shew_1469	0.80	-1.2
1,694,622	+		Shew_1469	0.80	+0.4
1,694,627	+		Shew_1469	0.80	+2.8
1,694,630	+		Shew_1469	0.80	+0.6
1,694,630	-		Shew_1469	0.80	+2.0
1,694,632	+		Shew_1469	0.81	+0.3
1,694,632	+		Shew_1469	0.81	-1.8
1,694,632	+		Shew_1469	0.81	+0.6
1,694,632	+		Shew_1469	0.81	-0.6
1,694,632	+		Shew_1469	0.81	+1.6
1,694,635	-		Shew_1469	0.81	+2.2
1,694,635	-		Shew_1469	0.81	+0.6
1,694,635	-		Shew_1469	0.81	+1.3
1,694,635	-		Shew_1469	0.81	-2.0
1,694,640	-		Shew_1469	0.81	+0.9
1,694,640	-		Shew_1469	0.81	+0.6
1,694,866	+				-0.7
1,694,876	+				+0.3
1,694,877	-				+1.5
1,694,877	-				-1.4
1,694,919	-				+1.2
1,694,921	+				-0.9
1,694,921	+				+2.3
1,694,921	+				-1.2
1,694,927	+				-2.6
1,694,969	+				+1.5
1,694,970	+				+1.9
1,694,997	-				+0.0
1,695,008	-				+0.0
1,695,048	+				+1.3
1,695,186	+		Shew_R0049	0.51	+2.3
1,695,194	-		Shew_R0049	0.61	+0.7
1,695,194	-		Shew_R0049	0.61	-2.4
1,695,209	-		Shew_R0049	0.81	-0.2
1,695,264	-				+1.3