Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0246 and Shew_0247 are separated by 306 nucleotides Shew_0247 and Shew_0248 are separated by 44 nucleotides Shew_0248 and Shew_0249 are separated by 455 nucleotides
Shew_0246: Shew_0246 - hypothetical protein (RefSeq), at 265,675 to 266,292
_0246
Shew_0247: Shew_0247 - hypothetical protein (RefSeq), at 266,599 to 266,994
_0247
Shew_0248: Shew_0248 - GCN5-related N-acetyltransferase (RefSeq), at 267,039 to 267,596
_0248
Shew_0249: Shew_0249 - GCN5-related N-acetyltransferase (RefSeq), at 268,052 to 268,594
_0249
Position (kb) 267
268 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 266.568 kb on + strand at 266.576 kb on - strand at 266.616 kb on + strand at 266.688 kb on + strand, within Shew_0247 at 266.885 kb on + strand, within Shew_0247 at 266.893 kb on - strand, within Shew_0247 at 266.893 kb on - strand, within Shew_0247 at 267.192 kb on - strand, within Shew_0248 at 267.285 kb on - strand, within Shew_0248 at 267.287 kb on + strand, within Shew_0248 at 267.295 kb on - strand, within Shew_0248 at 267.295 kb on - strand, within Shew_0248 at 267.369 kb on + strand, within Shew_0248 at 267.371 kb on - strand, within Shew_0248 at 267.418 kb on + strand, within Shew_0248 at 267.592 kb on - strand at 267.607 kb on - strand at 267.913 kb on + strand at 267.932 kb on - strand at 268.026 kb on + strand at 268.110 kb on - strand, within Shew_0249 at 268.171 kb on - strand, within Shew_0249 at 268.342 kb on - strand, within Shew_0249 at 268.507 kb on + strand, within Shew_0249
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 266,568 + -1.2 266,576 - -2.1 266,616 + +1.0 266,688 + Shew_0247 0.22 +0.6 266,885 + Shew_0247 0.72 -3.2 266,893 - Shew_0247 0.74 -1.3 266,893 - Shew_0247 0.74 +0.7 267,192 - Shew_0248 0.27 -0.1 267,285 - Shew_0248 0.44 +1.3 267,287 + Shew_0248 0.44 +1.8 267,295 - Shew_0248 0.46 +1.2 267,295 - Shew_0248 0.46 +1.0 267,369 + Shew_0248 0.59 +1.1 267,371 - Shew_0248 0.59 +2.8 267,418 + Shew_0248 0.68 -1.3 267,592 - +2.7 267,607 - -0.7 267,913 + -1.1 267,932 - -1.4 268,026 + -1.5 268,110 - Shew_0249 0.11 +0.5 268,171 - Shew_0249 0.22 +1.1 268,342 - Shew_0249 0.53 +0.6 268,507 + Shew_0249 0.84 +0.1
Or see this region's nucleotide sequence