Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08020 and AZOBR_RS08025 are separated by 37 nucleotides AZOBR_RS08025 and AZOBR_RS08030 are separated by 258 nucleotides
AZOBR_RS08020: AZOBR_RS08020 - D-alanine dehydrogenase (EC 1.4.99.-) (from data) , at 1,691,817 to 1,693,127
_RS08020
AZOBR_RS08025: AZOBR_RS08025 - hypothetical protein, at 1,693,165 to 1,693,800
_RS08025
AZOBR_RS08030: AZOBR_RS08030 - glutamine amidotransferase, at 1,694,059 to 1,694,631
_RS08030
Position (kb)
1691
1692
1693
1694 Strain fitness (log2 ratio)
-1
0
1 at 1691.646 kb on + strand at 1691.657 kb on - strand at 1691.865 kb on + strand at 1691.937 kb on + strand at 1691.937 kb on + strand at 1691.938 kb on - strand at 1691.938 kb on - strand at 1692.117 kb on + strand, within AZOBR_RS08020 at 1692.118 kb on - strand, within AZOBR_RS08020 at 1692.156 kb on + strand, within AZOBR_RS08020 at 1692.156 kb on + strand, within AZOBR_RS08020 at 1692.156 kb on + strand, within AZOBR_RS08020 at 1692.306 kb on + strand, within AZOBR_RS08020 at 1692.474 kb on + strand, within AZOBR_RS08020 at 1692.475 kb on - strand, within AZOBR_RS08020 at 1692.475 kb on - strand, within AZOBR_RS08020 at 1692.561 kb on + strand, within AZOBR_RS08020 at 1692.561 kb on + strand, within AZOBR_RS08020 at 1692.562 kb on - strand, within AZOBR_RS08020 at 1692.562 kb on - strand, within AZOBR_RS08020 at 1692.562 kb on - strand, within AZOBR_RS08020 at 1692.583 kb on - strand, within AZOBR_RS08020 at 1692.583 kb on - strand, within AZOBR_RS08020 at 1692.583 kb on - strand, within AZOBR_RS08020 at 1692.642 kb on + strand, within AZOBR_RS08020 at 1692.643 kb on - strand, within AZOBR_RS08020 at 1693.166 kb on + strand at 1693.328 kb on + strand, within AZOBR_RS08025 at 1693.524 kb on + strand, within AZOBR_RS08025 at 1693.524 kb on + strand, within AZOBR_RS08025 at 1693.524 kb on + strand, within AZOBR_RS08025 at 1693.778 kb on + strand at 1693.922 kb on + strand at 1693.922 kb on + strand at 1694.016 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 1,691,646 + +0.1 1,691,657 - +0.0 1,691,865 + +0.6 1,691,937 + +1.2 1,691,937 + +1.0 1,691,938 - +0.7 1,691,938 - +0.7 1,692,117 + AZOBR_RS08020 0.23 +0.2 1,692,118 - AZOBR_RS08020 0.23 +0.3 1,692,156 + AZOBR_RS08020 0.26 -0.8 1,692,156 + AZOBR_RS08020 0.26 +1.3 1,692,156 + AZOBR_RS08020 0.26 +0.2 1,692,306 + AZOBR_RS08020 0.37 +0.7 1,692,474 + AZOBR_RS08020 0.50 +0.2 1,692,475 - AZOBR_RS08020 0.50 +0.9 1,692,475 - AZOBR_RS08020 0.50 -0.4 1,692,561 + AZOBR_RS08020 0.57 +0.7 1,692,561 + AZOBR_RS08020 0.57 +1.1 1,692,562 - AZOBR_RS08020 0.57 +0.4 1,692,562 - AZOBR_RS08020 0.57 +0.6 1,692,562 - AZOBR_RS08020 0.57 +0.9 1,692,583 - AZOBR_RS08020 0.58 +1.2 1,692,583 - AZOBR_RS08020 0.58 +0.8 1,692,583 - AZOBR_RS08020 0.58 +0.6 1,692,642 + AZOBR_RS08020 0.63 +1.0 1,692,643 - AZOBR_RS08020 0.63 +0.5 1,693,166 + +0.4 1,693,328 + AZOBR_RS08025 0.26 -0.2 1,693,524 + AZOBR_RS08025 0.56 -0.2 1,693,524 + AZOBR_RS08025 0.56 +0.0 1,693,524 + AZOBR_RS08025 0.56 -0.1 1,693,778 + +0.2 1,693,922 + -0.7 1,693,922 + +0.0 1,694,016 - -0.1
Or see this region's nucleotide sequence