Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29215

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
6,348,240	+				-0.9
6,348,240	+				-0.2
6,348,240	+				-0.6
6,348,240	+				+1.4
6,348,240	+				+1.6
6,348,241	-				+1.3
6,348,241	-				-2.2
6,348,441	+				+0.3
6,348,441	+				-1.1
6,348,442	-				+1.6
6,348,442	-				-0.7
6,348,442	-				+0.0
6,348,442	-				-0.9
6,348,473	+				+0.4
6,348,598	+				+0.3
6,348,599	-				+1.4
6,348,599	-				-0.3
6,348,611	-				+0.3
6,348,611	-				-1.1
6,348,611	-				-0.7
6,348,611	-				+0.4
6,348,648	+				+0.8
6,348,648	+				-0.4
6,348,648	+				+0.9
6,348,649	-				-0.1
6,348,737	+				-1.4
6,348,737	+				+0.8
6,348,738	-				+0.3
6,348,741	+				-1.0
6,348,741	+				-0.6
6,348,741	+				+1.6
6,348,741	+				-0.3
6,348,774	-				-0.2
6,348,779	+				-0.6
6,348,779	+				-0.1
6,348,795	+				-2.3
6,348,795	+				-1.7
6,348,882	+				-0.9
6,348,882	+				+0.0
6,348,882	+				+1.6
6,348,882	+				+1.3
6,348,882	+				-0.9
6,348,882	+				+0.8
6,348,882	+				-0.0
6,348,883	-				-0.3
6,348,883	-				-0.4
6,348,883	-				-0.0
6,348,959	+				-1.6
6,348,959	+				-0.8
6,348,959	+				+0.4
6,348,960	-				-0.2
6,348,960	-				-0.9
6,348,963	+				+1.3
6,348,963	+				+0.3
6,348,963	+				-0.5
6,348,963	+				-0.6
6,348,963	+				-0.1
6,348,963	+				-0.6
6,348,963	+				-1.6
6,348,963	+				-0.3
6,348,963	+				+0.3
6,348,963	+				-0.3
6,348,964	-				-0.9
6,348,964	-				-0.6
6,348,964	-				-1.3
6,348,964	-				+1.3
6,348,964	-				+1.3
6,348,964	-				-1.3
6,348,964	-				-0.3
6,348,964	-				+1.0
6,348,964	-				+1.0
6,348,964	-				-0.3
6,348,974	+				+1.0
6,348,975	-				-0.2
6,349,001	+				+0.1
6,349,039	+				-0.2
6,349,039	+				-0.6
6,349,039	+				+0.9
6,349,039	+				-0.1
6,349,040	-				-0.8
6,349,040	-				-1.1
6,349,051	+				-0.2
6,349,052	-				+0.7
6,349,052	-				-1.5
6,349,091	+				-1.4
6,349,093	+				-1.1
6,349,093	+				+0.3
6,349,093	+				+0.4
6,349,093	+				+1.5
6,349,093	+				-0.9
6,349,093	+				-0.1
6,349,093	+				+0.9
6,349,093	+				+0.9
6,349,093	+				+0.3
6,349,094	-				+1.0
6,349,094	-				-0.1
6,349,094	-				+0.1
6,349,094	-				-1.1
6,349,094	-				+0.4
6,349,161	+				+0.5
6,349,161	+				+0.8
6,349,161	+				+0.1
6,349,161	+				+2.0
6,349,161	+				-0.7
6,349,162	-				+0.6
6,349,162	-				+0.7
6,349,162	-				+2.3
6,349,162	-				-1.8
6,349,162	-				-0.3
6,349,162	-				-1.2
6,349,162	-				-0.5
6,349,162	-				-1.7
6,349,162	-				-0.5
6,349,177	+				-0.0
6,349,392	+		AO353_29215	0.60	+0.8
6,349,392	+		AO353_29215	0.60	+2.8
6,349,392	+		AO353_29215	0.60	+0.0
6,349,392	+		AO353_29215	0.60	+1.0
6,349,491	+				+0.1
6,349,491	+				-0.1
6,349,492	-				+0.1
6,349,492	-				-0.9
6,349,492	-				+0.9
6,349,492	-				-2.0
6,349,492	-				+0.0
6,349,512	+				-2.0
6,349,512	+				+0.0
6,349,584	+				+0.5
6,349,595	-				-0.9
6,349,595	-				-0.0
6,349,595	-				+1.8
6,349,595	-				+0.7
6,349,667	-				-1.3
6,349,667	-				-0.2
6,349,667	-				-0.2
6,349,729	+				-0.7
6,349,730	-				-1.1
6,349,730	-				-0.3
6,349,730	-				-1.4
6,349,835	-		AO353_29220	0.14	+1.1
6,349,882	+		AO353_29220	0.17	+1.8
6,349,882	+		AO353_29220	0.17	+0.4
6,349,882	+		AO353_29220	0.17	+1.6
6,349,882	+		AO353_29220	0.17	-0.3
6,349,882	+		AO353_29220	0.17	-0.4
6,349,883	-		AO353_29220	0.17	-1.7
6,349,883	-		AO353_29220	0.17	-1.1
6,349,883	-		AO353_29220	0.17	+2.3
6,349,883	-		AO353_29220	0.17	+1.0
6,349,883	-		AO353_29220	0.17	-0.0
6,349,883	-		AO353_29220	0.17	+0.2
6,349,883	-		AO353_29220	0.17	-0.3
6,349,906	+		AO353_29220	0.18	+1.3
6,349,906	+		AO353_29220	0.18	-0.2
6,349,906	+		AO353_29220	0.18	+1.0
6,349,906	+		AO353_29220	0.18	-2.7
6,349,906	+		AO353_29220	0.18	-1.7
6,349,907	-		AO353_29220	0.18	+0.5
6,349,921	+		AO353_29220	0.19	-1.9
6,349,921	+		AO353_29220	0.19	+0.7
6,349,921	+		AO353_29220	0.19	-1.8
6,349,921	+		AO353_29220	0.19	+0.8
6,349,922	-		AO353_29220	0.19	+0.7
6,349,922	-		AO353_29220	0.19	-0.5
6,349,922	-		AO353_29220	0.19	+0.3
6,349,924	+		AO353_29220	0.19	+0.3
6,349,924	+		AO353_29220	0.19	+0.3
6,349,924	+		AO353_29220	0.19	+1.8
6,349,924	+		AO353_29220	0.19	-0.1
6,349,924	+		AO353_29220	0.19	+0.8
6,349,924	+		AO353_29220	0.19	-1.0
6,349,924	+		AO353_29220	0.19	+0.6
6,349,925	-		AO353_29220	0.19	+1.3
6,349,925	-		AO353_29220	0.19	-0.3
6,349,925	-		AO353_29220	0.19	-0.7
6,349,925	-		AO353_29220	0.19	+0.3
6,349,925	-		AO353_29220	0.19	-0.7
6,349,925	-		AO353_29220	0.19	+1.3
6,350,041	+		AO353_29220	0.26	+0.0
6,350,041	+		AO353_29220	0.26	+0.7
6,350,041	+		AO353_29220	0.26	+0.6
6,350,041	+		AO353_29220	0.26	+0.3
6,350,042	-		AO353_29220	0.26	+0.7
6,350,042	-		AO353_29220	0.26	+0.8
6,350,042	-		AO353_29220	0.26	-0.3
6,350,042	-		AO353_29220	0.26	+1.3
6,350,042	-		AO353_29220	0.26	-0.6
6,350,209	+		AO353_29220	0.35	+0.7
6,350,209	+		AO353_29220	0.35	-1.3
6,350,209	+		AO353_29220	0.35	+2.1
6,350,209	+		AO353_29220	0.35	+0.8
6,350,210	-		AO353_29220	0.35	-1.3
6,350,210	-		AO353_29220	0.35	+0.4
6,350,373	+		AO353_29220	0.44	-1.1
6,350,373	+		AO353_29220	0.44	+0.8
6,350,374	-		AO353_29220	0.45	+0.9
6,350,395	+		AO353_29220	0.46	-1.3
6,350,434	+		AO353_29220	0.48	-0.6
6,350,434	+		AO353_29220	0.48	-0.3
6,350,513	+		AO353_29220	0.52	+1.1