Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21405

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
4,686,289	+				-1.0
4,686,289	+				-0.3
4,686,289	+				+0.6
4,686,290	-				+1.8
4,686,290	-				-0.1
4,686,290	-				+0.1
4,686,290	-				+0.4
4,686,290	-				+1.6
4,686,322	+				-0.5
4,686,342	+				-1.5
4,686,342	+				-1.5
4,686,343	-				+1.8
4,686,343	-				+0.3
4,686,343	-				+0.9
4,686,365	+				+1.1
4,686,365	+				-0.9
4,686,365	+				-0.5
4,686,366	-				-0.2
4,686,404	+				+0.1
4,686,404	+				+1.3
4,686,404	+				+1.1
4,686,404	+				+0.9
4,686,404	+				+0.3
4,686,404	+				+1.0
4,686,404	+				-0.5
4,686,404	+				+1.3
4,686,404	+				-0.2
4,686,404	+				+0.4
4,686,404	+				+0.4
4,686,404	+				+1.0
4,686,404	+				+0.3
4,686,404	+				-0.3
4,686,404	+				-0.9
4,686,405	-				-1.5
4,686,405	-				-0.3
4,686,405	-				+1.3
4,686,405	-				-0.5
4,686,405	-				+0.9
4,686,405	-				-0.5
4,686,405	-				+0.5
4,686,405	-				-1.1
4,686,405	-				+2.3
4,686,405	-				+0.0
4,686,405	-				-0.3
4,686,405	-				+0.0
4,686,406	+				+0.5
4,686,406	+				+0.5
4,686,406	+				+0.6
4,686,406	+				+0.3
4,686,407	-				-2.1
4,686,407	-				+0.5
4,686,407	-				-1.6
4,686,407	-				+0.1
4,686,408	+				+0.7
4,686,408	+				-0.2
4,686,408	+				+0.3
4,686,408	+				-0.7
4,686,408	+				+0.5
4,686,408	+				+0.4
4,686,408	+				-1.3
4,686,409	-				+0.3
4,686,409	-				+0.3
4,686,409	-				-0.3
4,686,409	-				+0.4
4,686,409	-				-1.1
4,686,409	-				-0.9
4,686,434	+				-0.1
4,686,434	+				+0.3
4,686,436	+				-1.5
4,686,436	+				+1.5
4,686,437	-				-0.3
4,686,437	-				+0.1
4,686,471	+				+0.7
4,686,471	+				+0.0
4,686,472	-				-1.0
4,686,472	-				+0.3
4,686,481	+				+1.3
4,686,482	-				-1.5
4,686,482	-				-0.6
4,686,482	-				+0.5
4,686,540	+				+0.1
4,686,540	+				-0.4
4,686,557	+				+1.6
4,686,558	-				-0.0
4,686,558	-				-0.2
4,686,587	+				+1.8
4,686,587	+				+0.6
4,686,587	+				+0.3
4,686,588	-				+0.5
4,686,588	-				+0.3
4,686,588	-				+2.6
4,686,709	+				+0.3
4,686,709	+				+0.3
4,686,710	-				+0.7
4,686,710	-				-1.1
4,686,710	-				-0.3
4,686,931	-		AO353_21400	0.64	-0.4
4,687,015	+		AO353_21400	0.85	-0.2
4,687,015	+		AO353_21400	0.85	+1.3
4,687,015	+		AO353_21400	0.85	+2.8
4,687,015	+		AO353_21400	0.85	-0.1
4,687,016	-		AO353_21400	0.85	-0.5
4,687,016	-		AO353_21400	0.85	+0.3
4,687,171	+				+0.6
4,687,172	-				+1.0
4,687,185	+				-0.6
4,687,221	+				-0.3
4,687,221	+				-0.2
4,687,222	-				+0.1
4,687,225	+				+1.7
4,687,225	+				-1.1
4,687,237	-				+0.3
4,687,237	-				-0.2
4,687,264	+				-0.5
4,687,264	+				-0.0
4,687,264	+				+1.0
4,687,265	-				-1.2
4,687,433	+				+1.1
4,687,434	-				+0.5
4,687,434	-				-0.5
4,687,462	+		AO353_21405	0.11	+1.0
4,687,462	+		AO353_21405	0.11	-1.0
4,687,463	-		AO353_21405	0.11	+0.1
4,687,556	+		AO353_21405	0.17	-0.2
4,687,914	+		AO353_21405	0.39	-1.5
4,687,914	+		AO353_21405	0.39	+0.3
4,687,915	-		AO353_21405	0.39	+0.7
4,687,915	-		AO353_21405	0.39	+0.5
4,688,219	-		AO353_21405	0.58	-1.6
4,688,384	+		AO353_21405	0.68	-1.2
4,688,385	-		AO353_21405	0.68	+0.3
4,688,385	-		AO353_21405	0.68	-1.6
4,688,399	+		AO353_21405	0.69	-1.0
4,688,399	+		AO353_21405	0.69	-0.3
4,688,399	+		AO353_21405	0.69	-0.2
4,688,399	+		AO353_21405	0.69	+1.1
4,688,400	-		AO353_21405	0.69	-0.3
4,688,400	-		AO353_21405	0.69	+1.0
4,688,400	-		AO353_21405	0.69	-0.2
4,688,498	+		AO353_21405	0.75	-0.7
4,688,498	+		AO353_21405	0.75	-0.5
4,688,498	+		AO353_21405	0.75	-0.7
4,688,498	+		AO353_21405	0.75	+1.0
4,688,498	+		AO353_21405	0.75	-0.1
4,688,498	+		AO353_21405	0.75	-0.6
4,688,498	+		AO353_21405	0.75	-0.3
4,688,499	-		AO353_21405	0.75	+1.3
4,688,499	-		AO353_21405	0.75	+0.0
4,688,499	-		AO353_21405	0.75	+0.2
4,688,499	-		AO353_21405	0.75	+0.1
4,688,499	-		AO353_21405	0.75	-3.5
4,688,499	-		AO353_21405	0.75	-1.5
4,688,642	+		AO353_21405	0.84	-0.9
4,688,643	-		AO353_21405	0.84	-0.3
4,688,643	-		AO353_21405	0.84	-0.9
4,688,646	+		AO353_21405	0.84	-2.4
4,688,646	+		AO353_21405	0.84	-0.7
4,688,691	+		AO353_21405	0.87	-0.3
4,688,691	+		AO353_21405	0.87	+0.3
4,688,691	+		AO353_21405	0.87	+1.0
4,688,691	+		AO353_21405	0.87	-0.9
4,688,692	-		AO353_21405	0.87	-0.3
4,688,692	-		AO353_21405	0.87	-0.9
4,688,692	-		AO353_21405	0.87	+0.6
4,688,692	-		AO353_21405	0.87	-1.1
4,688,692	-		AO353_21405	0.87	+0.5
4,688,692	-		AO353_21405	0.87	-0.9
4,688,692	-		AO353_21405	0.87	-0.2
4,688,696	-		AO353_21405	0.87	+0.3
4,688,696	-		AO353_21405	0.87	-0.6
4,688,775	+				+0.3
4,688,775	+				+0.3
4,688,775	+				+0.3
4,688,776	-				-0.5
4,688,776	-				+1.3
4,688,776	-				-0.2
4,688,776	-				+1.1
4,688,778	+				+0.1
4,688,778	+				-0.7
4,688,778	+				-1.1
4,688,779	-				+0.6
4,688,779	-				-0.0
4,688,779	-				-0.4
4,688,789	+				-0.7
4,688,789	+				+0.4
4,688,789	+				+0.0
4,688,789	+				-0.7
4,688,789	+				-2.1
4,688,789	+				-1.4
4,688,789	+				-2.1
4,688,789	+				+1.3
4,688,789	+				+0.5
4,688,789	+				+1.9
4,688,789	+				-0.3
4,688,789	+				+2.3
4,688,789	+				-0.5
4,688,789	+				+0.6
4,688,789	+				+0.9
4,688,789	+				+0.5
4,688,790	-				+0.5
4,688,790	-				-0.3
4,688,790	-				-1.1
4,688,790	-				+0.0
4,688,790	-				-0.1
4,688,790	-				+0.7
4,688,790	-				-0.3
4,688,790	-				+0.7
4,688,790	-				+0.0
4,688,790	-				+0.3
4,688,790	-				+0.9
4,688,790	-				+0.3
4,688,791	+				+3.1
4,688,876	+				-1.9
4,688,963	-				-0.1
4,688,986	-				+0.1
4,689,167	-		AO353_21410	0.65	-1.5
4,689,184	+		AO353_21410	0.73	+0.3
4,689,184	+		AO353_21410	0.73	-2.1
4,689,184	+		AO353_21410	0.73	-0.5
4,689,185	-		AO353_21410	0.74	-2.3
4,689,236	+				-0.1
4,689,236	+				+0.7
4,689,236	+				-0.7
4,689,237	-				-3.0
4,689,396	+		AO353_21415	0.50	-0.4
4,689,396	+		AO353_21415	0.50	-1.3
4,689,396	+		AO353_21415	0.50	-0.1
4,689,397	-		AO353_21415	0.50	-1.3
4,689,397	-		AO353_21415	0.50	+0.5
4,689,397	-		AO353_21415	0.50	+0.4
4,689,431	+		AO353_21415	0.65	-0.7
4,689,431	+		AO353_21415	0.65	+0.5
4,689,431	+		AO353_21415	0.65	-0.1
4,689,432	-		AO353_21415	0.65	-0.5
4,689,432	-		AO353_21415	0.65	-1.3
4,689,432	-		AO353_21415	0.65	-0.5
4,689,432	-		AO353_21415	0.65	-0.3
4,689,432	-		AO353_21415	0.65	+0.5
4,689,432	-		AO353_21415	0.65	-0.3
4,689,432	-		AO353_21415	0.65	+0.1
4,689,513	+				+0.0
4,689,514	-				-0.2
4,689,532	+				+0.0
4,689,532	+				+0.1
4,689,533	-				+0.7
4,689,533	-				-1.1
4,689,620	+				-1.7
4,689,621	-				-0.3
4,689,621	-				-1.5
4,689,621	-				-1.0
4,689,621	-				-0.1
4,689,621	-				-0.9
4,689,737	+		AO353_21420	0.34	+0.3
4,689,738	-		AO353_21420	0.35	-1.2
4,689,738	-		AO353_21420	0.35	+1.0
4,689,749	-		AO353_21420	0.41	+2.2
4,689,816	+		AO353_21420	0.76	-0.4
4,689,816	+		AO353_21420	0.76	-0.3
4,689,816	+		AO353_21420	0.76	+0.7
4,689,816	+		AO353_21420	0.76	-2.2
4,689,816	+		AO353_21420	0.76	-1.3
4,689,816	+		AO353_21420	0.76	+1.3
4,689,817	-		AO353_21420	0.76	-3.1
4,689,817	-		AO353_21420	0.76	-0.7
4,689,817	-				+0.8
4,689,817	-		AO353_21420	0.76	-1.0
4,689,817	-		AO353_21420	0.76	-1.5
4,689,817	-		AO353_21420	0.76	+1.3
4,689,817	-		AO353_21420	0.76	-0.7
4,689,817	-		AO353_21420	0.76	+0.1
4,689,817	-		AO353_21420	0.76	-0.3
4,689,817	-		AO353_21420	0.76	+0.1
4,689,817	-		AO353_21420	0.76	+1.5
4,689,817	-				+0.3
4,689,862	+				-1.3
4,689,862	+				-0.9
4,689,862	+				-1.5
4,689,862	+				-1.3
4,689,863	-				+1.3
4,689,863	-				+0.4
4,689,863	-				-0.5
4,689,877	+				-0.9
4,689,878	-				-1.1
4,689,895	-				-0.4