Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02640 and AO353_02645 are separated by 473 nucleotides AO353_02645 and AO353_02650 are separated by 27 nucleotides AO353_02650 and AO353_02655 are separated by 15 nucleotides
AO353_02640: AO353_02640 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 562,683 to 563,294
_02640
AO353_02645: AO353_02645 - hypothetical protein, at 563,768 to 564,352
_02645
AO353_02650: AO353_02650 - SAM-dependent methyltransferase, at 564,380 to 565,042
_02650
AO353_02655: AO353_02655 - peptidase P60, at 565,058 to 565,591
_02655
Position (kb) 563
564
565 Strain fitness (log2 ratio) -2
-1
0
1
2 at 562.804 kb on - strand, within AO353_02640 at 562.864 kb on + strand, within AO353_02640 at 563.336 kb on + strand at 563.336 kb on + strand at 563.337 kb on - strand at 563.337 kb on - strand at 563.342 kb on + strand at 563.342 kb on + strand at 563.481 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.489 kb on + strand at 563.490 kb on - strand at 563.490 kb on - strand at 563.612 kb on + strand at 563.612 kb on + strand at 563.613 kb on - strand at 563.638 kb on + strand at 563.638 kb on + strand at 563.638 kb on + strand at 563.638 kb on + strand at 563.639 kb on - strand at 563.639 kb on - strand at 563.740 kb on + strand at 563.740 kb on + strand at 563.741 kb on - strand at 563.741 kb on - strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.745 kb on + strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.746 kb on - strand at 563.850 kb on - strand, within AO353_02645 at 563.882 kb on + strand, within AO353_02645 at 563.995 kb on + strand, within AO353_02645 at 563.995 kb on + strand, within AO353_02645 at 563.995 kb on + strand, within AO353_02645 at 563.996 kb on - strand, within AO353_02645 at 563.996 kb on - strand, within AO353_02645 at 564.041 kb on + strand, within AO353_02645 at 564.041 kb on + strand, within AO353_02645 at 564.134 kb on + strand, within AO353_02645 at 564.134 kb on + strand, within AO353_02645 at 564.197 kb on - strand, within AO353_02645 at 564.264 kb on - strand, within AO353_02645 at 564.278 kb on + strand, within AO353_02645 at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.308 kb on + strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.309 kb on - strand at 564.365 kb on + strand at 564.365 kb on + strand at 564.366 kb on - strand at 564.382 kb on - strand at 564.464 kb on - strand, within AO353_02650 at 564.512 kb on + strand, within AO353_02650 at 564.513 kb on - strand, within AO353_02650 at 564.543 kb on - strand, within AO353_02650 at 564.588 kb on + strand, within AO353_02650 at 564.589 kb on - strand, within AO353_02650 at 564.589 kb on - strand, within AO353_02650 at 564.589 kb on - strand, within AO353_02650 at 564.753 kb on + strand, within AO353_02650 at 564.753 kb on + strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.754 kb on - strand, within AO353_02650 at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 564.999 kb on + strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.000 kb on - strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.003 kb on + strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.004 kb on - strand at 565.005 kb on + strand at 565.006 kb on - strand at 565.006 kb on - strand at 565.059 kb on + strand at 565.059 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.110 kb on + strand at 565.111 kb on - strand at 565.111 kb on - strand at 565.125 kb on + strand, within AO353_02655 at 565.126 kb on - strand, within AO353_02655 at 565.126 kb on - strand, within AO353_02655 at 565.157 kb on - strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.200 kb on + strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.201 kb on - strand, within AO353_02655 at 565.265 kb on + strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.266 kb on - strand, within AO353_02655 at 565.333 kb on + strand, within AO353_02655 at 565.333 kb on + strand, within AO353_02655
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 562,804 - AO353_02640 0.20 -1.6 562,864 + AO353_02640 0.30 +0.0 563,336 + +1.0 563,336 + -1.4 563,337 - +0.5 563,337 - +0.5 563,342 + -0.5 563,342 + -0.9 563,481 + +0.8 563,489 + +0.4 563,489 + +0.7 563,489 + -0.2 563,489 + -1.4 563,489 + -0.0 563,490 - +1.1 563,490 - +1.1 563,612 + +0.4 563,612 + -0.4 563,613 - -1.6 563,638 + +0.5 563,638 + +0.2 563,638 + +1.1 563,638 + +1.2 563,639 - -0.0 563,639 - -1.7 563,740 + +1.1 563,740 + -1.3 563,741 - -0.2 563,741 - +1.5 563,745 + +0.0 563,745 + +0.5 563,745 + -1.5 563,745 + +0.2 563,745 + +0.3 563,745 + -1.4 563,746 - -1.6 563,746 - +0.1 563,746 - +0.8 563,746 - -0.5 563,746 - +0.1 563,746 - +0.4 563,850 - AO353_02645 0.14 -0.8 563,882 + AO353_02645 0.19 -0.4 563,995 + AO353_02645 0.39 +0.2 563,995 + AO353_02645 0.39 -0.7 563,995 + AO353_02645 0.39 -0.6 563,996 - AO353_02645 0.39 -0.5 563,996 - AO353_02645 0.39 -1.2 564,041 + AO353_02645 0.47 -2.1 564,041 + AO353_02645 0.47 -0.3 564,134 + AO353_02645 0.63 -0.2 564,134 + AO353_02645 0.63 +1.8 564,197 - AO353_02645 0.73 -0.0 564,264 - AO353_02645 0.85 -1.1 564,278 + AO353_02645 0.87 +0.5 564,308 + -0.5 564,308 + -1.9 564,308 + +1.5 564,308 + -0.5 564,308 + +0.5 564,308 + +0.7 564,308 + -0.6 564,308 + +0.1 564,309 - +1.5 564,309 - -0.2 564,309 - +0.8 564,309 - +1.5 564,309 - -0.9 564,309 - +0.8 564,309 - +1.1 564,365 + +0.8 564,365 + +0.3 564,366 - -0.8 564,382 - -0.0 564,464 - AO353_02650 0.13 +1.1 564,512 + AO353_02650 0.20 -0.0 564,513 - AO353_02650 0.20 +0.3 564,543 - AO353_02650 0.25 +0.5 564,588 + AO353_02650 0.31 -0.2 564,589 - AO353_02650 0.32 -0.6 564,589 - AO353_02650 0.32 +0.1 564,589 - AO353_02650 0.32 +0.2 564,753 + AO353_02650 0.56 -0.2 564,753 + AO353_02650 0.56 -0.6 564,754 - AO353_02650 0.56 -1.1 564,754 - AO353_02650 0.56 -0.9 564,754 - -0.0 564,754 - AO353_02650 0.56 -0.4 564,754 - AO353_02650 0.56 +0.3 564,754 - AO353_02650 0.56 +0.2 564,754 - AO353_02650 0.56 +1.1 564,999 + +1.2 564,999 + -0.5 564,999 + +0.8 564,999 + -0.8 564,999 + -0.3 565,000 - +0.6 565,000 - -0.2 565,000 - -1.0 565,000 - -2.5 565,000 - -1.0 565,000 - -1.6 565,003 + -1.0 565,003 + +1.2 565,003 + -0.0 565,003 + +0.5 565,003 + -0.4 565,003 + +0.8 565,003 + +1.0 565,003 + -0.2 565,003 + -0.9 565,003 + -0.4 565,003 + -0.0 565,003 + +1.4 565,004 - +1.5 565,004 - -0.0 565,004 - -0.0 565,004 - +1.5 565,004 - +0.4 565,004 - -0.6 565,005 + +0.9 565,006 - +1.1 565,006 - +1.5 565,059 + -0.5 565,059 + -0.9 565,110 + +1.3 565,110 + +0.1 565,110 + -0.8 565,110 + +0.8 565,111 - -0.3 565,111 - +0.9 565,125 + AO353_02655 0.13 +1.5 565,126 - AO353_02655 0.13 -1.8 565,126 - AO353_02655 0.13 +0.3 565,157 - AO353_02655 0.19 +0.1 565,200 + AO353_02655 0.27 +1.5 565,200 + AO353_02655 0.27 -1.0 565,200 + AO353_02655 0.27 -0.9 565,200 + AO353_02655 0.27 -0.6 565,200 + AO353_02655 0.27 +0.3 565,200 + AO353_02655 0.27 -0.1 565,201 - AO353_02655 0.27 -0.3 565,201 - AO353_02655 0.27 -1.5 565,201 - AO353_02655 0.27 +0.5 565,201 - AO353_02655 0.27 +0.1 565,201 - AO353_02655 0.27 -0.8 565,265 + AO353_02655 0.39 +0.8 565,266 - AO353_02655 0.39 -1.0 565,266 - AO353_02655 0.39 -0.2 565,266 - AO353_02655 0.39 -0.6 565,333 + AO353_02655 0.51 +0.3 565,333 + AO353_02655 0.51 +0.5
Or see this region's nucleotide sequence