Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2351
Experiment: MoYLS4 with Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,962,557 | - | DvMF_2350 | 0.77 | -0.2 | |
2,962,640 | + | DvMF_2350 | 0.79 | -0.6 | |
2,962,686 | + | DvMF_2350 | 0.81 | -0.1 | |
2,962,708 | - | DvMF_2350 | 0.82 | -0.4 | |
2,962,709 | - | DvMF_2350 | 0.82 | -0.7 | |
2,962,818 | - | DvMF_2350 | 0.85 | -1.3 | |
2,962,887 | + | DvMF_2350 | 0.88 | +0.0 | |
2,962,893 | - | DvMF_2350 | 0.88 | -0.6 | |
2,962,905 | + | DvMF_2350 | 0.88 | -0.4 | |
2,964,003 | + | DvMF_2351 | 0.26 | -0.2 | |
2,964,347 | - | DvMF_2351 | 0.45 | -2.3 | |
2,964,512 | + | DvMF_2351 | 0.53 | -2.6 | |
2,964,531 | + | DvMF_2351 | 0.54 | -1.5 | |
2,964,604 | + | DvMF_2351 | 0.58 | -3.5 | |
2,964,716 | - | DvMF_2351 | 0.64 | -3.2 | |
2,964,716 | - | DvMF_2351 | 0.64 | -2.1 | |
2,964,745 | - | DvMF_2351 | 0.66 | -2.5 | |
2,964,950 | + | DvMF_2351 | 0.77 | -3.3 | |
2,965,243 | - | -2.5 | |||
2,965,604 | + | -1.0 | |||
2,965,671 | - | -1.0 | |||
2,965,968 | + | -2.3 |
Or see this region's nucleotide sequence