Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2046

Experiment: MoYLS4 with Polymyxin B sulfate 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Polymyxin B sulfate 0.0625 mg/ml
2,536,569	-				-1.3
2,536,618	-		DvMF_2045	0.11	-0.5
2,536,635	-		DvMF_2045	0.13	-1.4
2,536,680	-		DvMF_2045	0.17	-1.3
2,536,680	-		DvMF_2045	0.17	-1.5
2,536,706	-		DvMF_2045	0.20	-1.3
2,536,706	-		DvMF_2045	0.20	-2.1
2,536,708	+		DvMF_2045	0.20	-3.8
2,536,752	-		DvMF_2045	0.25	-1.9
2,536,829	+		DvMF_2045	0.33	-2.6
2,536,908	-		DvMF_2045	0.42	-2.6
2,536,911	-		DvMF_2045	0.42	-1.8
2,536,939	+		DvMF_2045	0.45	-2.8
2,536,941	+		DvMF_2045	0.45	-2.3
2,536,941	+		DvMF_2045	0.45	-0.1
2,536,941	+		DvMF_2045	0.45	-1.9
2,536,941	+		DvMF_2045	0.45	-1.0
2,536,949	-		DvMF_2045	0.46	-2.5
2,536,951	+		DvMF_2045	0.47	-2.1
2,536,951	+		DvMF_2045	0.47	-2.8
2,537,048	+		DvMF_2045	0.57	-0.1
2,537,056	-		DvMF_2045	0.58	-1.5
2,537,056	-		DvMF_2045	0.58	-1.1
2,537,120	-		DvMF_2045	0.65	-1.9
2,537,121	+		DvMF_2045	0.65	-1.1
2,537,194	+		DvMF_2045	0.73	-2.7
2,537,334	-		DvMF_2045	0.88	-1.8
2,537,339	-		DvMF_2045	0.88	-2.4
2,537,376	+				-1.4
2,537,376	+				-2.7
2,537,376	+				-2.5
2,537,384	-				-1.5
2,537,384	-				-1.1
2,537,385	-				-3.0
2,537,386	+				-2.9
2,537,386	+				-2.1
2,537,386	+				-1.8
2,537,397	+				-1.5
2,537,397	+				-1.6
2,537,397	+				-2.8
2,537,456	+				+1.2
2,537,456	+				-3.4
2,537,464	-				-0.3
2,537,514	+				-0.2
2,537,520	+				-0.9
2,537,520	+				-0.2
2,537,556	-				-0.2
2,537,618	+		DvMF_2046	0.19	-0.8
2,537,618	+		DvMF_2046	0.19	-0.3
2,537,636	+		DvMF_2046	0.23	-0.3
2,537,636	+		DvMF_2046	0.23	-0.4
2,537,636	+		DvMF_2046	0.23	-0.3
2,537,644	-		DvMF_2046	0.25	+0.0
2,537,644	-		DvMF_2046	0.25	-0.1
2,537,644	-		DvMF_2046	0.25	-0.2
2,537,653	+		DvMF_2046	0.27	-0.6
2,537,760	+		DvMF_2046	0.53	-1.0
2,537,790	+		DvMF_2046	0.61	-0.9
2,537,821	+		DvMF_2046	0.68	-0.3
2,537,821	-		DvMF_2046	0.68	+0.1
2,537,841	+		DvMF_2046	0.73	-0.3
2,537,844	-		DvMF_2046	0.74	+0.1
2,537,844	-		DvMF_2046	0.74	-0.1
2,537,859	+		DvMF_2046	0.77	-0.6
2,537,962	+				-1.3
2,537,987	+				-2.4
2,538,001	+				-1.7
2,538,001	+				-1.8
2,538,001	+				-1.5
2,538,018	+				-1.2
2,538,041	-				-1.4
2,538,049	-				-1.9
2,538,071	+				-2.6
2,538,079	-		DvMF_2047	0.11	-1.5
2,538,152	-		DvMF_2047	0.20	-1.6
2,538,178	+		DvMF_2047	0.23	-2.9
2,538,194	-		DvMF_2047	0.25	-0.5
2,538,230	-		DvMF_2047	0.30	-1.4
2,538,266	-		DvMF_2047	0.34	-2.6
2,538,339	+		DvMF_2047	0.44	-0.6
2,538,346	+		DvMF_2047	0.44	-2.3
2,538,352	-		DvMF_2047	0.45	-1.6
2,538,376	+		DvMF_2047	0.48	+0.2
2,538,385	+		DvMF_2047	0.49	-0.8
2,538,426	-		DvMF_2047	0.55	-1.5
2,538,443	+		DvMF_2047	0.57	-2.4
2,538,461	-		DvMF_2047	0.59	-1.5
2,538,470	-		DvMF_2047	0.60	-1.0
2,538,479	+		DvMF_2047	0.61	-1.9
2,538,479	+		DvMF_2047	0.61	-3.9
2,538,540	+		DvMF_2047	0.69	-1.0
2,538,555	-		DvMF_2047	0.71	-1.8
2,538,630	-		DvMF_2047	0.80	-1.2
2,538,650	+		DvMF_2047	0.83	-1.9
2,538,650	+		DvMF_2047	0.83	+0.5
2,538,711	+				-3.4
2,538,719	-				-1.3
2,538,728	+				-0.8
2,538,736	-				-1.1
2,538,757	-				-1.5
2,538,795	-				-0.2
2,538,805	-				-0.1
2,538,890	+				-0.5
2,538,898	-				+0.1
2,538,898	-				-0.2
2,538,903	-				-0.3
2,538,903	-				-0.2
2,538,904	-				-0.5
2,538,905	-				-0.4