Experiment: MoYLS4 with Polymyxin B sulfate 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0133 and DvMF_0134 are separated by 206 nucleotides DvMF_0134 and DvMF_0135 are separated by 113 nucleotides DvMF_0135 and DvMF_0136 overlap by 1 nucleotides
DvMF_0133: DvMF_0133 - Methyltransferase type 11 (RefSeq), at 148,839 to 149,576
_0133
DvMF_0134: DvMF_0134 - hypothetical protein (RefSeq), at 149,783 to 150,322
_0134
DvMF_0135: DvMF_0135 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 150,436 to 151,254
_0135
DvMF_0136: DvMF_0136 - hypothetical protein (RefSeq), at 151,254 to 152,498
_0136
Position (kb) 150
151
152 Strain fitness (log2 ratio) -1
0
1 at 149.743 kb on + strand at 149.845 kb on - strand, within DvMF_0134 at 149.935 kb on + strand, within DvMF_0134 at 149.942 kb on + strand, within DvMF_0134 at 149.943 kb on - strand, within DvMF_0134 at 150.050 kb on + strand, within DvMF_0134 at 150.215 kb on - strand, within DvMF_0134 at 150.362 kb on - strand at 150.410 kb on - strand at 150.426 kb on + strand at 150.545 kb on - strand, within DvMF_0135 at 150.705 kb on - strand, within DvMF_0135 at 150.801 kb on + strand, within DvMF_0135 at 151.032 kb on + strand, within DvMF_0135 at 151.045 kb on + strand, within DvMF_0135 at 151.045 kb on + strand, within DvMF_0135 at 151.334 kb on - strand at 151.433 kb on - strand, within DvMF_0136 at 151.500 kb on - strand, within DvMF_0136 at 151.521 kb on + strand, within DvMF_0136 at 151.521 kb on + strand, within DvMF_0136 at 151.561 kb on + strand, within DvMF_0136 at 151.561 kb on + strand, within DvMF_0136 at 151.588 kb on - strand, within DvMF_0136 at 151.593 kb on + strand, within DvMF_0136 at 151.717 kb on - strand, within DvMF_0136 at 151.758 kb on - strand, within DvMF_0136 at 151.776 kb on - strand, within DvMF_0136 at 151.863 kb on - strand, within DvMF_0136 at 152.025 kb on + strand, within DvMF_0136 at 152.119 kb on - strand, within DvMF_0136 at 152.129 kb on - strand, within DvMF_0136
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.0625 mg/ml remove 149,743 + -0.4 149,845 - DvMF_0134 0.11 +0.2 149,935 + DvMF_0134 0.28 -0.1 149,942 + DvMF_0134 0.29 +0.1 149,943 - DvMF_0134 0.30 -0.1 150,050 + DvMF_0134 0.49 -0.5 150,215 - DvMF_0134 0.80 -0.3 150,362 - -0.2 150,410 - -0.1 150,426 + -1.2 150,545 - DvMF_0135 0.13 -0.8 150,705 - DvMF_0135 0.33 -0.6 150,801 + DvMF_0135 0.45 -0.1 151,032 + DvMF_0135 0.73 -0.0 151,045 + DvMF_0135 0.74 -0.4 151,045 + DvMF_0135 0.74 -0.2 151,334 - -0.3 151,433 - DvMF_0136 0.14 +0.3 151,500 - DvMF_0136 0.20 +0.2 151,521 + DvMF_0136 0.21 +0.3 151,521 + DvMF_0136 0.21 +0.4 151,561 + DvMF_0136 0.25 +0.2 151,561 + DvMF_0136 0.25 +0.2 151,588 - DvMF_0136 0.27 +0.8 151,593 + DvMF_0136 0.27 +0.5 151,717 - DvMF_0136 0.37 +0.1 151,758 - DvMF_0136 0.40 +0.4 151,776 - DvMF_0136 0.42 +0.3 151,863 - DvMF_0136 0.49 +0.2 152,025 + DvMF_0136 0.62 +0.2 152,119 - DvMF_0136 0.69 +0.5 152,129 - DvMF_0136 0.70 +0.3
Or see this region's nucleotide sequence