Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT3319 and BT3320 are separated by 33 nucleotides BT3320 and BT3321 are separated by 83 nucleotides
BT3319: BT3319 - signal peptidase I (NCBI ptt file), at 4,262,067 to 4,263,548
BT3319
BT3320: BT3320 - dihydrodipicolinate reductase (NCBI ptt file), at 4,263,582 to 4,264,346
BT3320
BT3321: BT3321 - hypothetical protein (NCBI ptt file), at 4,264,430 to 4,265,713
BT3321
Position (kb) 4263
4264
4265 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 4263.554 kb on - strand at 4263.985 kb on - strand, within BT3320 at 4264.074 kb on - strand, within BT3320 at 4264.119 kb on - strand, within BT3320 at 4264.163 kb on - strand, within BT3320 at 4264.163 kb on - strand, within BT3320 at 4264.172 kb on - strand, within BT3320 at 4264.204 kb on - strand, within BT3320 at 4264.260 kb on - strand, within BT3320 at 4264.449 kb on - strand at 4264.504 kb on - strand at 4264.604 kb on - strand, within BT3321 at 4264.604 kb on - strand, within BT3321 at 4264.612 kb on - strand, within BT3321 at 4264.612 kb on - strand, within BT3321 at 4264.612 kb on - strand, within BT3321 at 4264.657 kb on + strand, within BT3321 at 4264.664 kb on + strand, within BT3321 at 4264.746 kb on + strand, within BT3321 at 4264.805 kb on + strand, within BT3321 at 4265.119 kb on - strand, within BT3321 at 4265.141 kb on + strand, within BT3321 at 4265.142 kb on - strand, within BT3321 at 4265.143 kb on + strand, within BT3321 at 4265.280 kb on - strand, within BT3321 at 4265.299 kb on + strand, within BT3321
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 4,263,554 - -0.1 4,263,985 - BT3320 0.53 -5.4 4,264,074 - BT3320 0.64 -3.4 4,264,119 - BT3320 0.70 -4.1 4,264,163 - BT3320 0.76 -1.9 4,264,163 - BT3320 0.76 -1.9 4,264,172 - BT3320 0.77 -2.4 4,264,204 - BT3320 0.81 -0.9 4,264,260 - BT3320 0.89 -4.4 4,264,449 - -1.4 4,264,504 - -1.3 4,264,604 - BT3321 0.14 +1.7 4,264,604 - BT3321 0.14 +0.0 4,264,612 - BT3321 0.14 +0.3 4,264,612 - BT3321 0.14 +1.4 4,264,612 - BT3321 0.14 +0.7 4,264,657 + BT3321 0.18 +1.4 4,264,664 + BT3321 0.18 -0.2 4,264,746 + BT3321 0.25 -1.6 4,264,805 + BT3321 0.29 +0.9 4,265,119 - BT3321 0.54 -2.3 4,265,141 + BT3321 0.55 +2.9 4,265,142 - BT3321 0.55 +0.9 4,265,143 + BT3321 0.56 -0.8 4,265,280 - BT3321 0.66 +2.9 4,265,299 + BT3321 0.68 -0.2
Or see this region's nucleotide sequence