Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2132

Experiment: Flask growth in 60 uE Light-Dark 8:16

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 8:16
2,210,556	-	slt	Synpcc7942_2131	0.66	+0.3
2,210,559	+	slt	Synpcc7942_2131	0.66	-0.5
2,210,583	+	slt	Synpcc7942_2131	0.68	+0.6
2,210,600	+	slt	Synpcc7942_2131	0.68	+0.2
2,210,620	-	slt	Synpcc7942_2131	0.69	-1.1
2,210,639	+	slt	Synpcc7942_2131	0.70	+0.7
2,210,727	+	slt	Synpcc7942_2131	0.74	-0.2
2,210,735	-	slt	Synpcc7942_2131	0.75	+0.1
2,210,787	+	slt	Synpcc7942_2131	0.77	-0.5
2,210,787	+	slt	Synpcc7942_2131	0.77	-0.6
2,210,797	-	slt	Synpcc7942_2131	0.78	+0.2
2,210,804	+	slt	Synpcc7942_2131	0.78	+1.3
2,210,812	-	slt	Synpcc7942_2131	0.79	-0.2
2,210,814	+	slt	Synpcc7942_2131	0.79	+0.2
2,210,814	+	slt	Synpcc7942_2131	0.79	-0.2
2,210,817	-	slt	Synpcc7942_2131	0.79	-0.4
2,210,834	+	slt	Synpcc7942_2131	0.80	+0.6
2,210,834	+	slt	Synpcc7942_2131	0.80	+0.0
2,210,834	+	slt	Synpcc7942_2131	0.80	-0.3
2,210,834	+	slt	Synpcc7942_2131	0.80	+0.5
2,210,842	-	slt	Synpcc7942_2131	0.80	+0.8
2,210,848	+	slt	Synpcc7942_2131	0.80	-0.5
2,210,872	+	slt	Synpcc7942_2131	0.81	+0.1
2,210,899	+	slt	Synpcc7942_2131	0.83	-1.0
2,210,899	+	slt	Synpcc7942_2131	0.83	-0.2
2,210,899	+	slt	Synpcc7942_2131	0.83	+0.6
2,210,909	-	slt	Synpcc7942_2131	0.83	+0.5
2,210,910	+	slt	Synpcc7942_2131	0.83	+0.8
2,210,915	-	slt	Synpcc7942_2131	0.84	-1.3
2,210,923	-	slt	Synpcc7942_2131	0.84	+0.0
2,210,927	+	slt	Synpcc7942_2131	0.84	-0.9
2,210,932	+	slt	Synpcc7942_2131	0.84	-1.1
2,210,933	-	slt	Synpcc7942_2131	0.84	+0.7
2,210,937	+	slt	Synpcc7942_2131	0.85	+0.3
2,210,937	+	slt	Synpcc7942_2131	0.85	+0.7
2,210,945	-	slt	Synpcc7942_2131	0.85	+0.2
2,210,945	-	slt	Synpcc7942_2131	0.85	-0.6
2,210,945	-	slt	Synpcc7942_2131	0.85	-0.3
2,210,955	-	slt	Synpcc7942_2131	0.85	+0.1
2,210,966	+	slt	Synpcc7942_2131	0.86	+0.0
2,210,971	+	slt	Synpcc7942_2131	0.86	-0.2
2,210,976	+	slt	Synpcc7942_2131	0.86	-1.3
2,210,976	+	slt	Synpcc7942_2131	0.86	+0.0
2,210,976	+	slt	Synpcc7942_2131	0.86	-0.3
2,210,979	-	slt	Synpcc7942_2131	0.87	+0.5
2,210,984	-	slt	Synpcc7942_2131	0.87	-0.1
2,210,984	-	slt	Synpcc7942_2131	0.87	-0.4
2,210,989	+	slt	Synpcc7942_2131	0.87	-1.6
2,211,013	+	slt	Synpcc7942_2131	0.88	+0.1
2,211,031	+	slt	Synpcc7942_2131	0.89	+0.1
2,211,055	+				-0.1
2,211,055	+				-0.9
2,211,065	+				+0.4
2,211,096	+				-0.2
2,211,096	+				+0.3
2,211,263	+				-0.0
2,211,263	+				+0.3
2,211,271	-				-1.0
2,211,304	-				-0.2
2,211,307	-				-0.9
2,211,310	+				+0.4
2,211,374	-				-0.5
2,211,395	-				+0.2
2,211,395	-				+0.1
2,211,422	+				+0.1
2,211,422	+				+0.1
2,211,423	-				+0.1
2,211,423	-				-0.2
2,211,442	+				-0.7
2,211,450	-				-0.4
2,211,453	-				-0.2
2,211,465	+				-0.6
2,211,495	-				-0.1
2,211,534	+				+0.2
2,211,540	-				-0.5
2,211,540	-				-0.5
2,211,542	-				-0.2
2,211,547	-				+0.0
2,211,591	+				-0.5
2,211,599	-				-0.3
2,211,626	+				-0.1
2,211,730	-	manB	Synpcc7942_2132	0.13	+0.1
2,211,730	-	manB	Synpcc7942_2132	0.13	-1.7
2,211,799	+	manB	Synpcc7942_2132	0.18	-0.5
2,211,891	-	manB	Synpcc7942_2132	0.24	+0.1
2,212,053	+	manB	Synpcc7942_2132	0.36	-1.1
2,212,204	+	manB	Synpcc7942_2132	0.46	-0.3
2,212,370	+	manB	Synpcc7942_2132	0.58	-2.5
2,212,605	-	manB	Synpcc7942_2132	0.74	-0.7
2,212,794	-	manB	Synpcc7942_2132	0.88	-1.4
2,212,799	-	manB	Synpcc7942_2132	0.88	-0.9
2,212,964	-				+0.6
2,212,968	+				+0.3
2,212,969	-				+0.5
2,212,969	-				-0.0
2,212,997	+				+0.4
2,213,007	+				+0.7
2,213,013	+				+0.4
2,213,015	-				+0.1
2,213,057	+		Synpcc7942_2133	0.17	+0.1
2,213,060	-		Synpcc7942_2133	0.18	-0.6
2,213,063	+		Synpcc7942_2133	0.18	-0.2
2,213,071	-		Synpcc7942_2133	0.20	+0.9
2,213,093	+		Synpcc7942_2133	0.24	+0.3
2,213,175	+		Synpcc7942_2133	0.40	+0.4
2,213,175	+		Synpcc7942_2133	0.40	-0.4
2,213,183	-		Synpcc7942_2133	0.42	-2.1
2,213,195	-		Synpcc7942_2133	0.44	+0.9
2,213,203	-		Synpcc7942_2133	0.46	-1.2
2,213,203	-		Synpcc7942_2133	0.46	+0.3
2,213,207	-		Synpcc7942_2133	0.47	-0.2
2,213,246	+		Synpcc7942_2133	0.54	-0.2
2,213,259	-		Synpcc7942_2133	0.57	+0.7
2,213,269	-		Synpcc7942_2133	0.59	+0.5
2,213,272	-		Synpcc7942_2133	0.60	+0.3
2,213,276	-		Synpcc7942_2133	0.60	+0.9
2,213,281	-		Synpcc7942_2133	0.61	+0.0
2,213,375	+		Synpcc7942_2133	0.80	-0.6
2,213,375	+		Synpcc7942_2133	0.80	+0.2
2,213,375	+		Synpcc7942_2133	0.80	-0.4
2,213,375	+		Synpcc7942_2133	0.80	+0.3
2,213,375	+		Synpcc7942_2133	0.80	+0.7
2,213,380	+		Synpcc7942_2133	0.81	+0.7
2,213,383	-		Synpcc7942_2133	0.81	-0.3
2,213,383	-		Synpcc7942_2133	0.81	-1.0
2,213,383	-		Synpcc7942_2133	0.81	-0.6
2,213,384	+		Synpcc7942_2133	0.82	+0.5
2,213,385	+		Synpcc7942_2133	0.82	+0.2
2,213,385	+		Synpcc7942_2133	0.82	-0.3
2,213,393	-		Synpcc7942_2133	0.83	+0.3
2,213,393	-		Synpcc7942_2133	0.83	+0.7
2,213,393	-		Synpcc7942_2133	0.83	-0.4
2,213,405	+		Synpcc7942_2133	0.86	+0.8
2,213,423	-		Synpcc7942_2133	0.89	+0.4
2,213,425	+		Synpcc7942_2133	0.90	+0.4
2,213,437	-				-0.3
2,213,444	-				+0.3
2,213,507	-				+0.3
2,213,507	-				+0.1
2,213,525	-				-0.8
2,213,545	+				-0.5
2,213,590	+				+1.1
2,213,590	-				-0.3
2,213,598	-				+0.3
2,213,605	-				+0.8
2,213,624	-				-0.1
2,213,624	-				+0.7
2,213,639	+				-0.3
2,213,639	+				+0.4
2,213,647	-				-0.1
2,213,647	-				+1.3
2,213,647	-				+0.8
2,213,650	+				+0.0
2,213,652	-				+1.2
2,213,682	-				+0.4
2,213,709	-				+1.0
2,213,752	-				+0.3
2,213,753	-				-1.1
2,213,787	-	amiA	Synpcc7942_2134	0.12	-0.4
2,213,842	-	amiA	Synpcc7942_2134	0.17	+0.8
2,213,854	+	amiA	Synpcc7942_2134	0.19	+0.2
2,213,854	+	amiA	Synpcc7942_2134	0.19	+0.0
2,213,862	-	amiA	Synpcc7942_2134	0.19	-0.0
2,213,877	-	amiA	Synpcc7942_2134	0.21	+0.0
2,213,877	-	amiA	Synpcc7942_2134	0.21	+0.4
2,213,877	-	amiA	Synpcc7942_2134	0.21	+0.5
2,213,877	-	amiA	Synpcc7942_2134	0.21	+0.3
2,213,897	-	amiA	Synpcc7942_2134	0.23	+0.2
2,213,918	+	amiA	Synpcc7942_2134	0.25	+0.5
2,213,922	-	amiA	Synpcc7942_2134	0.25	+0.2
2,213,929	+	amiA	Synpcc7942_2134	0.26	+0.1
2,213,934	+	amiA	Synpcc7942_2134	0.26	-0.2
2,213,953	-	amiA	Synpcc7942_2134	0.28	-0.3