Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2111

Experiment: Flask growth in 60 uE Light-Dark 8:16

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 8:16
2,191,902	+				+0.2
2,191,916	+				-0.2
2,191,916	+				+0.1
2,191,916	+				-0.3
2,191,953	+				-0.8
2,191,961	-				+0.3
2,192,004	+				-0.6
2,192,008	+				-0.2
2,192,017	-				-0.0
2,192,125	+		Synpcc7942_2111	0.11	-0.6
2,192,152	+		Synpcc7942_2111	0.14	-1.0
2,192,155	+		Synpcc7942_2111	0.14	-0.6
2,192,277	+		Synpcc7942_2111	0.28	-0.9
2,192,290	+		Synpcc7942_2111	0.29	-0.5
2,192,300	-		Synpcc7942_2111	0.30	-1.1
2,192,378	-		Synpcc7942_2111	0.39	-0.7
2,192,402	+		Synpcc7942_2111	0.41	-1.2
2,192,449	+		Synpcc7942_2111	0.47	-2.0
2,192,454	+		Synpcc7942_2111	0.47	+0.5
2,192,486	+		Synpcc7942_2111	0.51	-1.0
2,192,486	+		Synpcc7942_2111	0.51	-1.3
2,192,522	+		Synpcc7942_2111	0.55	-1.6
2,192,527	+		Synpcc7942_2111	0.55	-1.0
2,192,530	-		Synpcc7942_2111	0.56	-1.0
2,192,548	-		Synpcc7942_2111	0.58	-0.1
2,192,568	+		Synpcc7942_2111	0.60	-1.0
2,192,590	-		Synpcc7942_2111	0.62	-1.4
2,192,600	-		Synpcc7942_2111	0.63	-0.7
2,192,600	-		Synpcc7942_2111	0.63	-1.1
2,192,616	+		Synpcc7942_2111	0.65	-0.2
2,192,640	+		Synpcc7942_2111	0.68	-0.2
2,192,648	-		Synpcc7942_2111	0.69	-0.6
2,192,714	+		Synpcc7942_2111	0.76	-0.7
2,192,792	+		Synpcc7942_2111	0.84	-0.1
2,192,817	+		Synpcc7942_2111	0.87	-0.6
2,192,851	-				-0.8
2,192,903	+				-0.2
2,192,905	-				+0.0
2,192,906	-				-0.5
2,192,909	+				-0.5
2,192,924	-				-0.2
2,192,927	+				-0.0
2,193,021	+		Synpcc7942_2112	0.11	-0.4
2,193,380	-		Synpcc7942_2112	0.77	-0.3
2,193,434	+		Synpcc7942_2112	0.87	-2.5
2,193,478	+				-1.3
2,193,645	+				+0.1
2,193,645	+				+0.2
2,193,674	-				-1.0
2,193,675	+				-0.1
2,193,680	+				+0.5
2,193,680	+				+0.2
2,193,683	-				-0.2
2,193,683	-				-0.1