Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_807 and Pf6N2E2_808 are separated by 39 nucleotides Pf6N2E2_808 and Pf6N2E2_809 are separated by 10 nucleotides Pf6N2E2_809 and Pf6N2E2_810 are separated by 160 nucleotides
Pf6N2E2_807 - Various polyols ABC transporter, ATP-binding component, at 939,179 to 940,282
_807
Pf6N2E2_808 - Various polyols ABC transporter, permease component 2, at 940,322 to 941,152
_808
Pf6N2E2_809 - Various polyols ABC transporter, permease component 1, at 941,163 to 942,098
_809
Pf6N2E2_810 - Various polyols ABC transporter, periplasmic substrate-binding protein, at 942,259 to 943,569
_810
Position (kb) 941
942
943 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 940.306 kb on + strand at 940.306 kb on + strand at 940.314 kb on - strand at 940.324 kb on - strand at 940.455 kb on + strand, within Pf6N2E2_808 at 940.455 kb on + strand, within Pf6N2E2_808 at 940.455 kb on + strand, within Pf6N2E2_808 at 940.590 kb on - strand, within Pf6N2E2_808 at 940.590 kb on - strand, within Pf6N2E2_808 at 940.610 kb on + strand, within Pf6N2E2_808 at 940.611 kb on - strand, within Pf6N2E2_808 at 940.668 kb on + strand, within Pf6N2E2_808 at 940.669 kb on - strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.675 kb on - strand, within Pf6N2E2_808 at 940.675 kb on - strand, within Pf6N2E2_808 at 940.713 kb on + strand, within Pf6N2E2_808 at 940.713 kb on + strand, within Pf6N2E2_808 at 940.717 kb on + strand, within Pf6N2E2_808 at 940.717 kb on + strand, within Pf6N2E2_808 at 940.770 kb on + strand, within Pf6N2E2_808 at 940.771 kb on - strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 941.293 kb on + strand, within Pf6N2E2_809 at 941.293 kb on + strand, within Pf6N2E2_809 at 941.294 kb on - strand, within Pf6N2E2_809 at 941.575 kb on - strand, within Pf6N2E2_809 at 941.872 kb on + strand, within Pf6N2E2_809 at 941.873 kb on - strand, within Pf6N2E2_809 at 941.926 kb on + strand, within Pf6N2E2_809 at 941.945 kb on - strand, within Pf6N2E2_809 at 941.945 kb on - strand, within Pf6N2E2_809 at 942.092 kb on + strand at 942.092 kb on + strand at 942.092 kb on + strand at 942.092 kb on + strand at 942.093 kb on - strand at 942.106 kb on + strand at 942.106 kb on + strand at 942.106 kb on + strand at 942.106 kb on + strand at 942.107 kb on - strand at 942.260 kb on + strand at 942.260 kb on + strand at 942.260 kb on + strand at 942.261 kb on - strand at 942.261 kb on - strand at 942.261 kb on - strand at 942.261 kb on - strand at 942.425 kb on + strand, within Pf6N2E2_810 at 942.426 kb on - strand, within Pf6N2E2_810 at 942.512 kb on + strand, within Pf6N2E2_810 at 942.513 kb on - strand, within Pf6N2E2_810 at 942.590 kb on + strand, within Pf6N2E2_810 at 942.616 kb on - strand, within Pf6N2E2_810 at 942.674 kb on + strand, within Pf6N2E2_810 at 942.675 kb on - strand, within Pf6N2E2_810 at 942.675 kb on - strand, within Pf6N2E2_810 at 942.675 kb on - strand, within Pf6N2E2_810 at 942.675 kb on - strand, within Pf6N2E2_810 at 943.037 kb on + strand, within Pf6N2E2_810 at 943.038 kb on - strand, within Pf6N2E2_810 at 943.038 kb on - strand, within Pf6N2E2_810 at 943.038 kb on - strand, within Pf6N2E2_810
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 940,306 + -2.0 940,306 + -1.0 940,314 - +1.3 940,324 - +0.6 940,455 + Pf6N2E2_808 0.16 -1.9 940,455 + Pf6N2E2_808 0.16 -1.6 940,455 + Pf6N2E2_808 0.16 -0.8 940,590 - Pf6N2E2_808 0.32 +1.0 940,590 - Pf6N2E2_808 0.32 -0.1 940,610 + Pf6N2E2_808 0.35 -2.5 940,611 - Pf6N2E2_808 0.35 -1.1 940,668 + Pf6N2E2_808 0.42 +0.5 940,669 - Pf6N2E2_808 0.42 -1.1 940,674 + Pf6N2E2_808 0.42 -1.7 940,674 + Pf6N2E2_808 0.42 -1.4 940,674 + Pf6N2E2_808 0.42 -0.4 940,674 + Pf6N2E2_808 0.42 -1.3 940,674 + Pf6N2E2_808 0.42 -1.2 940,675 - Pf6N2E2_808 0.42 +0.9 940,675 - Pf6N2E2_808 0.42 +0.9 940,713 + Pf6N2E2_808 0.47 -1.7 940,713 + Pf6N2E2_808 0.47 -1.8 940,717 + Pf6N2E2_808 0.48 -0.9 940,717 + Pf6N2E2_808 0.48 -0.9 940,770 + Pf6N2E2_808 0.54 -0.4 940,771 - Pf6N2E2_808 0.54 -2.5 940,831 + Pf6N2E2_808 0.61 -1.6 940,831 + Pf6N2E2_808 0.61 +0.0 940,831 + Pf6N2E2_808 0.61 -1.1 940,831 + Pf6N2E2_808 0.61 -1.1 940,831 + Pf6N2E2_808 0.61 +0.2 940,832 - Pf6N2E2_808 0.61 +0.1 940,832 - Pf6N2E2_808 0.61 -1.2 940,832 - Pf6N2E2_808 0.61 -1.4 940,832 - Pf6N2E2_808 0.61 +0.9 940,832 - Pf6N2E2_808 0.61 -0.5 940,832 - Pf6N2E2_808 0.61 +0.5 940,951 - Pf6N2E2_808 0.76 -0.3 940,951 - Pf6N2E2_808 0.76 +0.4 940,951 - Pf6N2E2_808 0.76 -0.3 940,951 - Pf6N2E2_808 0.76 -0.4 940,978 - Pf6N2E2_808 0.79 +0.7 940,978 - Pf6N2E2_808 0.79 -1.3 940,978 - Pf6N2E2_808 0.79 +0.4 940,978 - Pf6N2E2_808 0.79 -1.0 940,978 - Pf6N2E2_808 0.79 -0.2 941,293 + Pf6N2E2_809 0.14 -1.3 941,293 + Pf6N2E2_809 0.14 -2.3 941,294 - Pf6N2E2_809 0.14 +0.0 941,575 - Pf6N2E2_809 0.44 -1.4 941,872 + Pf6N2E2_809 0.76 -1.3 941,873 - Pf6N2E2_809 0.76 -0.0 941,926 + Pf6N2E2_809 0.82 -0.6 941,945 - Pf6N2E2_809 0.84 -0.7 941,945 - Pf6N2E2_809 0.84 -0.3 942,092 + -0.7 942,092 + +0.1 942,092 + -1.0 942,092 + -0.5 942,093 - -0.6 942,106 + -1.0 942,106 + -1.1 942,106 + -0.5 942,106 + -1.3 942,107 - -0.1 942,260 + -0.7 942,260 + -1.1 942,260 + +0.1 942,261 - +1.3 942,261 - -0.3 942,261 - +0.8 942,261 - +0.5 942,425 + Pf6N2E2_810 0.13 -3.0 942,426 - Pf6N2E2_810 0.13 +0.1 942,512 + Pf6N2E2_810 0.19 -0.7 942,513 - Pf6N2E2_810 0.19 -0.3 942,590 + Pf6N2E2_810 0.25 -0.6 942,616 - Pf6N2E2_810 0.27 +0.4 942,674 + Pf6N2E2_810 0.32 -0.3 942,675 - Pf6N2E2_810 0.32 -0.4 942,675 - Pf6N2E2_810 0.32 +0.5 942,675 - Pf6N2E2_810 0.32 +0.7 942,675 - Pf6N2E2_810 0.32 +0.6 943,037 + Pf6N2E2_810 0.59 -0.9 943,038 - Pf6N2E2_810 0.59 +0.1 943,038 - Pf6N2E2_810 0.59 -0.3 943,038 - Pf6N2E2_810 0.59 -0.6
Or see this region's nucleotide sequence