Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_806 and Pf6N2E2_807 are separated by 15 nucleotides Pf6N2E2_807 and Pf6N2E2_808 are separated by 39 nucleotides Pf6N2E2_808 and Pf6N2E2_809 are separated by 10 nucleotides
Pf6N2E2_806 - Multiple polyol-specific dehydrogenase (EC 1.1.1.-), at 937,682 to 939,163
_806
Pf6N2E2_807 - Various polyols ABC transporter, ATP-binding component, at 939,179 to 940,282
_807
Pf6N2E2_808 - Various polyols ABC transporter, permease component 2, at 940,322 to 941,152
_808
Pf6N2E2_809 - Various polyols ABC transporter, permease component 1, at 941,163 to 942,098
_809
Position (kb) 939
940
941 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 938.293 kb on - strand, within Pf6N2E2_806 at 938.293 kb on - strand, within Pf6N2E2_806 at 938.907 kb on + strand, within Pf6N2E2_806 at 938.922 kb on + strand, within Pf6N2E2_806 at 938.923 kb on - strand, within Pf6N2E2_806 at 939.030 kb on + strand at 939.030 kb on + strand at 939.030 kb on + strand at 939.031 kb on - strand at 939.031 kb on - strand at 939.033 kb on + strand at 939.034 kb on - strand at 939.119 kb on + strand at 939.119 kb on + strand at 939.119 kb on + strand at 939.177 kb on - strand at 939.230 kb on + strand at 939.230 kb on + strand at 939.231 kb on - strand at 939.619 kb on - strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.717 kb on + strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.718 kb on - strand, within Pf6N2E2_807 at 939.858 kb on - strand, within Pf6N2E2_807 at 940.023 kb on + strand, within Pf6N2E2_807 at 940.024 kb on - strand, within Pf6N2E2_807 at 940.032 kb on + strand, within Pf6N2E2_807 at 940.032 kb on + strand, within Pf6N2E2_807 at 940.032 kb on + strand, within Pf6N2E2_807 at 940.032 kb on + strand, within Pf6N2E2_807 at 940.032 kb on + strand, within Pf6N2E2_807 at 940.032 kb on + strand, within Pf6N2E2_807 at 940.033 kb on - strand, within Pf6N2E2_807 at 940.033 kb on - strand, within Pf6N2E2_807 at 940.033 kb on - strand, within Pf6N2E2_807 at 940.306 kb on + strand at 940.306 kb on + strand at 940.314 kb on - strand at 940.324 kb on - strand at 940.455 kb on + strand, within Pf6N2E2_808 at 940.455 kb on + strand, within Pf6N2E2_808 at 940.455 kb on + strand, within Pf6N2E2_808 at 940.590 kb on - strand, within Pf6N2E2_808 at 940.590 kb on - strand, within Pf6N2E2_808 at 940.610 kb on + strand, within Pf6N2E2_808 at 940.611 kb on - strand, within Pf6N2E2_808 at 940.668 kb on + strand, within Pf6N2E2_808 at 940.669 kb on - strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.674 kb on + strand, within Pf6N2E2_808 at 940.675 kb on - strand, within Pf6N2E2_808 at 940.675 kb on - strand, within Pf6N2E2_808 at 940.713 kb on + strand, within Pf6N2E2_808 at 940.713 kb on + strand, within Pf6N2E2_808 at 940.717 kb on + strand, within Pf6N2E2_808 at 940.717 kb on + strand, within Pf6N2E2_808 at 940.770 kb on + strand, within Pf6N2E2_808 at 940.771 kb on - strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.831 kb on + strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.832 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.951 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808 at 940.978 kb on - strand, within Pf6N2E2_808
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 938,293 - Pf6N2E2_806 0.41 -1.5 938,293 - Pf6N2E2_806 0.41 -1.2 938,907 + Pf6N2E2_806 0.83 +0.3 938,922 + Pf6N2E2_806 0.84 +0.8 938,923 - Pf6N2E2_806 0.84 -2.6 939,030 + -1.5 939,030 + -0.9 939,030 + -0.5 939,031 - -0.2 939,031 - -0.9 939,033 + -0.9 939,034 - -1.1 939,119 + -1.4 939,119 + -0.2 939,119 + -1.1 939,177 - -0.3 939,230 + -0.7 939,230 + -3.3 939,231 - +0.4 939,619 - Pf6N2E2_807 0.40 -0.7 939,717 + Pf6N2E2_807 0.49 -0.1 939,717 + Pf6N2E2_807 0.49 -0.8 939,717 + Pf6N2E2_807 0.49 -1.7 939,717 + Pf6N2E2_807 0.49 -1.8 939,717 + Pf6N2E2_807 0.49 -2.5 939,717 + Pf6N2E2_807 0.49 -2.2 939,717 + Pf6N2E2_807 0.49 -3.1 939,718 - Pf6N2E2_807 0.49 +0.0 939,718 - Pf6N2E2_807 0.49 -0.4 939,718 - Pf6N2E2_807 0.49 -1.6 939,718 - Pf6N2E2_807 0.49 +0.2 939,718 - Pf6N2E2_807 0.49 +0.5 939,718 - Pf6N2E2_807 0.49 -0.0 939,718 - Pf6N2E2_807 0.49 -0.4 939,718 - Pf6N2E2_807 0.49 -0.9 939,718 - Pf6N2E2_807 0.49 -1.2 939,858 - Pf6N2E2_807 0.62 +0.6 940,023 + Pf6N2E2_807 0.76 -1.3 940,024 - Pf6N2E2_807 0.77 -0.6 940,032 + Pf6N2E2_807 0.77 -2.2 940,032 + Pf6N2E2_807 0.77 +0.6 940,032 + Pf6N2E2_807 0.77 -1.5 940,032 + Pf6N2E2_807 0.77 -2.2 940,032 + Pf6N2E2_807 0.77 -1.5 940,032 + Pf6N2E2_807 0.77 -1.4 940,033 - Pf6N2E2_807 0.77 +0.1 940,033 - Pf6N2E2_807 0.77 -0.3 940,033 - Pf6N2E2_807 0.77 -1.0 940,306 + -2.0 940,306 + -1.0 940,314 - +1.3 940,324 - +0.6 940,455 + Pf6N2E2_808 0.16 -1.9 940,455 + Pf6N2E2_808 0.16 -1.6 940,455 + Pf6N2E2_808 0.16 -0.8 940,590 - Pf6N2E2_808 0.32 +1.0 940,590 - Pf6N2E2_808 0.32 -0.1 940,610 + Pf6N2E2_808 0.35 -2.5 940,611 - Pf6N2E2_808 0.35 -1.1 940,668 + Pf6N2E2_808 0.42 +0.5 940,669 - Pf6N2E2_808 0.42 -1.1 940,674 + Pf6N2E2_808 0.42 -1.7 940,674 + Pf6N2E2_808 0.42 -1.4 940,674 + Pf6N2E2_808 0.42 -0.4 940,674 + Pf6N2E2_808 0.42 -1.3 940,674 + Pf6N2E2_808 0.42 -1.2 940,675 - Pf6N2E2_808 0.42 +0.9 940,675 - Pf6N2E2_808 0.42 +0.9 940,713 + Pf6N2E2_808 0.47 -1.7 940,713 + Pf6N2E2_808 0.47 -1.8 940,717 + Pf6N2E2_808 0.48 -0.9 940,717 + Pf6N2E2_808 0.48 -0.9 940,770 + Pf6N2E2_808 0.54 -0.4 940,771 - Pf6N2E2_808 0.54 -2.5 940,831 + Pf6N2E2_808 0.61 -1.6 940,831 + Pf6N2E2_808 0.61 +0.0 940,831 + Pf6N2E2_808 0.61 -1.1 940,831 + Pf6N2E2_808 0.61 -1.1 940,831 + Pf6N2E2_808 0.61 +0.2 940,832 - Pf6N2E2_808 0.61 +0.1 940,832 - Pf6N2E2_808 0.61 -1.2 940,832 - Pf6N2E2_808 0.61 -1.4 940,832 - Pf6N2E2_808 0.61 +0.9 940,832 - Pf6N2E2_808 0.61 -0.5 940,832 - Pf6N2E2_808 0.61 +0.5 940,951 - Pf6N2E2_808 0.76 -0.3 940,951 - Pf6N2E2_808 0.76 +0.4 940,951 - Pf6N2E2_808 0.76 -0.3 940,951 - Pf6N2E2_808 0.76 -0.4 940,978 - Pf6N2E2_808 0.79 +0.7 940,978 - Pf6N2E2_808 0.79 -1.3 940,978 - Pf6N2E2_808 0.79 +0.4 940,978 - Pf6N2E2_808 0.79 -1.0 940,978 - Pf6N2E2_808 0.79 -0.2
Or see this region's nucleotide sequence