Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2623
Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Polymyxin B sulfate 0.125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,312,976 | + | DvMF_2622 | 0.42 | -0.5 | |
| 3,312,976 | + | DvMF_2622 | 0.42 | -0.5 | |
| 3,312,976 | + | DvMF_2622 | 0.42 | -0.1 | |
| 3,312,976 | + | DvMF_2622 | 0.42 | -0.8 | |
| 3,312,984 | - | DvMF_2622 | 0.43 | -0.8 | |
| 3,313,004 | + | DvMF_2622 | 0.44 | -0.6 | |
| 3,313,082 | - | DvMF_2622 | 0.50 | -1.7 | |
| 3,313,415 | - | DvMF_2622 | 0.76 | -0.2 | |
| 3,313,439 | - | DvMF_2622 | 0.78 | -0.3 | |
| 3,313,486 | + | DvMF_2622 | 0.82 | -0.7 | |
| 3,313,486 | + | DvMF_2622 | 0.82 | -2.1 | |
| 3,313,494 | - | DvMF_2622 | 0.82 | -0.9 | |
| 3,314,042 | - | DvMF_2623 | 0.15 | -0.1 | |
| 3,314,335 | + | DvMF_2623 | 0.79 | +0.1 | |
| 3,314,478 | - | +0.1 | |||
| 3,314,547 | - | -0.6 | |||
| 3,314,547 | - | +0.3 | |||
| 3,315,001 | - | DvMF_2624 | 0.46 | -0.1 | |
| 3,315,040 | + | DvMF_2624 | 0.54 | -0.3 | |
| 3,315,227 | - | -0.8 | |||
| 3,315,353 | + | -0.6 | |||
| 3,315,353 | + | +0.3 | |||
| 3,315,383 | + | -0.3 | |||
| 3,315,420 | + | -0.4 |
Or see this region's nucleotide sequence