Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2602 and DvMF_2603 are separated by 510 nucleotides DvMF_2603 and DvMF_2604 are separated by 24 nucleotides DvMF_2604 and DvMF_2605 are separated by 156 nucleotides
DvMF_2602: DvMF_2602 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 3,287,629 to 3,290,469
_2602
DvMF_2603: DvMF_2603 - hypothetical protein (RefSeq), at 3,290,980 to 3,292,089
_2603
DvMF_2604: DvMF_2604 - hypothetical protein (RefSeq), at 3,292,114 to 3,292,509
_2604
DvMF_2605: DvMF_2605 - UspA domain protein (RefSeq), at 3,292,666 to 3,293,109
_2605
Position (kb)
3290
3291
3292
3293 Strain fitness (log2 ratio)
-2
-1
0
1 at 3290.039 kb on - strand, within DvMF_2602 at 3290.252 kb on + strand at 3290.290 kb on + strand at 3290.298 kb on - strand at 3290.325 kb on - strand at 3290.437 kb on + strand at 3290.593 kb on - strand at 3290.616 kb on - strand at 3290.786 kb on - strand at 3290.855 kb on + strand at 3290.863 kb on - strand at 3291.119 kb on - strand, within DvMF_2603 at 3291.598 kb on - strand, within DvMF_2603 at 3291.604 kb on - strand, within DvMF_2603 at 3291.648 kb on - strand, within DvMF_2603 at 3292.185 kb on - strand, within DvMF_2604 at 3292.280 kb on - strand, within DvMF_2604 at 3292.456 kb on - strand, within DvMF_2604 at 3292.460 kb on - strand, within DvMF_2604 at 3292.494 kb on + strand at 3292.580 kb on - strand at 3292.761 kb on - strand, within DvMF_2605 at 3292.866 kb on + strand, within DvMF_2605 at 3293.024 kb on + strand, within DvMF_2605 at 3293.071 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.125 mg/ml remove 3,290,039 - DvMF_2602 0.85 -1.0 3,290,252 + -0.7 3,290,290 + -1.4 3,290,298 - +0.0 3,290,325 - -0.0 3,290,437 + -0.0 3,290,593 - -1.3 3,290,616 - +0.1 3,290,786 - -1.5 3,290,855 + -0.0 3,290,863 - +0.4 3,291,119 - DvMF_2603 0.13 -0.5 3,291,598 - DvMF_2603 0.56 +0.1 3,291,604 - DvMF_2603 0.56 -0.9 3,291,648 - DvMF_2603 0.60 +1.0 3,292,185 - DvMF_2604 0.18 -0.1 3,292,280 - DvMF_2604 0.42 -0.4 3,292,456 - DvMF_2604 0.86 -0.5 3,292,460 - DvMF_2604 0.87 -0.7 3,292,494 + -0.1 3,292,580 - -0.3 3,292,761 - DvMF_2605 0.21 -0.3 3,292,866 + DvMF_2605 0.45 -2.1 3,293,024 + DvMF_2605 0.81 -1.8 3,293,071 - -0.3
Or see this region's nucleotide sequence