Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2569 and DvMF_2570 are separated by 8 nucleotides DvMF_2570 and DvMF_2571 are separated by 2 nucleotides DvMF_2571 and DvMF_2572 are separated by 351 nucleotides
DvMF_2569: DvMF_2569 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 3,247,690 to 3,248,673
_2569
DvMF_2570: DvMF_2570 - hypothetical protein (RefSeq), at 3,248,682 to 3,250,268
_2570
DvMF_2571: DvMF_2571 - hypothetical protein (RefSeq), at 3,250,271 to 3,250,729
_2571
DvMF_2572: DvMF_2572 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,251,081 to 3,252,637
_2572
Position (kb)
3248
3249
3250
3251 Strain fitness (log2 ratio)
-2
-1
0
1 at 3247.708 kb on + strand at 3247.840 kb on + strand, within DvMF_2569 at 3247.959 kb on + strand, within DvMF_2569 at 3248.023 kb on + strand, within DvMF_2569 at 3248.158 kb on - strand, within DvMF_2569 at 3248.170 kb on - strand, within DvMF_2569 at 3248.240 kb on + strand, within DvMF_2569 at 3248.649 kb on + strand at 3248.952 kb on - strand, within DvMF_2570 at 3248.952 kb on - strand, within DvMF_2570 at 3249.110 kb on + strand, within DvMF_2570 at 3249.118 kb on - strand, within DvMF_2570 at 3249.287 kb on - strand, within DvMF_2570 at 3249.292 kb on - strand, within DvMF_2570 at 3249.972 kb on + strand, within DvMF_2570 at 3250.042 kb on - strand, within DvMF_2570 at 3250.242 kb on + strand at 3250.250 kb on - strand at 3250.309 kb on + strand at 3250.317 kb on - strand, within DvMF_2571 at 3250.317 kb on - strand, within DvMF_2571 at 3250.324 kb on + strand, within DvMF_2571 at 3250.324 kb on + strand, within DvMF_2571 at 3250.324 kb on + strand, within DvMF_2571 at 3250.332 kb on - strand, within DvMF_2571 at 3250.338 kb on + strand, within DvMF_2571 at 3250.525 kb on + strand, within DvMF_2571 at 3250.612 kb on - strand, within DvMF_2571 at 3250.760 kb on + strand at 3251.056 kb on + strand at 3251.116 kb on + strand at 3251.212 kb on + strand at 3251.224 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.125 mg/ml remove 3,247,708 + -0.8 3,247,840 + DvMF_2569 0.15 -0.3 3,247,959 + DvMF_2569 0.27 +1.3 3,248,023 + DvMF_2569 0.34 -0.2 3,248,158 - DvMF_2569 0.48 -0.3 3,248,170 - DvMF_2569 0.49 +1.4 3,248,240 + DvMF_2569 0.56 -0.4 3,248,649 + -0.8 3,248,952 - DvMF_2570 0.17 -0.8 3,248,952 - DvMF_2570 0.17 -0.8 3,249,110 + DvMF_2570 0.27 -1.5 3,249,118 - DvMF_2570 0.27 -0.4 3,249,287 - DvMF_2570 0.38 -0.6 3,249,292 - DvMF_2570 0.38 -1.0 3,249,972 + DvMF_2570 0.81 -1.2 3,250,042 - DvMF_2570 0.86 -1.0 3,250,242 + -0.7 3,250,250 - -0.1 3,250,309 + -0.1 3,250,317 - DvMF_2571 0.10 -0.5 3,250,317 - DvMF_2571 0.10 +0.4 3,250,324 + DvMF_2571 0.12 -1.5 3,250,324 + DvMF_2571 0.12 -1.2 3,250,324 + DvMF_2571 0.12 -0.1 3,250,332 - DvMF_2571 0.13 -0.4 3,250,338 + DvMF_2571 0.15 -1.0 3,250,525 + DvMF_2571 0.55 -0.1 3,250,612 - DvMF_2571 0.74 -0.6 3,250,760 + -2.3 3,251,056 + -1.0 3,251,116 + +0.4 3,251,212 + -0.8 3,251,224 - -0.1
Or see this region's nucleotide sequence