Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1864

Experiment: MoYLS4 with Polymyxin B sulfate 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1863 and DvMF_1864 are separated by 365 nucleotidesDvMF_1864 and DvMF_1865 are separated by 149 nucleotides DvMF_1863: DvMF_1863 - protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq), at 2,284,876 to 2,286,168 _1863 DvMF_1864: DvMF_1864 - phosphate acetyltransferase (RefSeq), at 2,286,534 to 2,288,648 _1864 DvMF_1865: DvMF_1865 - acetate kinase (RefSeq), at 2,288,798 to 2,290,012 _1865 Position (kb) 2286 2287 2288 2289Strain fitness (log2 ratio) -2 -1 0 1at 2286.243 kb on + strandat 2286.270 kb on + strandat 2286.278 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Polymyxin B sulfate 0.125 mg/ml
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2,286,243 + -2.7
2,286,270 + -0.1
2,286,278 - -1.1

Or see this region's nucleotide sequence